FFCP PHASE1:Hg19::chr1:179712011..179712021,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28274 | |||
|TSSclassifier=weak | |||
|UniProt=Q96GL9,A8K8R7 | |||
|association_with_transcript=-276bp_to_ENST00000341785,NM_173509,uc001gnj.2,uc009wxk.2_5end | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_5_at_FAM163A_5end | |||
|id=chr1:179712011..179712021,+ | |||
|ontology_enrichment_celltype=CL:0002553!8.62e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-34;1!CL:0000333;2.54e-27;5!CL:0002321;7.92e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.84e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.87e-07;82 | |||
|ontology_enrichment_disease=DOID:225!3.28e-11!1;DOID:169!7.83e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;5.74e-23;6!DOID:171;3.14e-14;10!DOID:3095;5.32e-07;22!DOID:2994;5.32e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.86e-23,6;DOID:171,2.84e-14,10;DOID:3095,5.09e-07,22;DOID:2994,5.09e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.78e-27!57;UBERON:0005068!7.78e-27!57;UBERON:0006241!7.78e-27!57;UBERON:0007135!7.78e-27!57;UBERON:0002616!7.06e-26!59;UBERON:0000955!1.43e-21!69;UBERON:0006238!1.43e-21!69;UBERON:0000007!1.88e-21!2;UBERON:0000073!8.17e-21!94;UBERON:0001016!8.17e-21!94;UBERON:0002780!6.15e-18!41;UBERON:0001890!6.15e-18!41;UBERON:0006240!6.15e-18!41;UBERON:0001017!6.24e-18!82;UBERON:0003080!1.71e-17!42;UBERON:0003075!3.03e-17!86;UBERON:0007284!3.03e-17!86;UBERON:0005743!5.01e-17!86;UBERON:0002346!2.12e-16!90;UBERON:0007023!1.02e-14!115;UBERON:0001896!5.40e-14!3;UBERON:0005290!5.40e-14!3;UBERON:0010096!5.40e-14!3;UBERON:0001894!9.96e-14!7;UBERON:0006222!9.96e-14!7;UBERON:0004733!1.82e-13!12;UBERON:0002028!1.82e-13!12;UBERON:0007277!1.82e-13!12;UBERON:0004732!1.89e-12!13;UBERON:0003056!8.93e-12!61;UBERON:0002298!9.27e-12!8;UBERON:0000033!2.15e-11!123;UBERON:0003296!3.29e-11!4;UBERON:0010133!3.29e-11!4;UBERON:0002902!4.01e-11!1;UBERON:0009899!4.01e-11!1;UBERON:0001882!4.91e-11!1;UBERON:0005403!4.91e-11!1;UBERON:0003076!8.09e-11!15;UBERON:0003057!8.09e-11!15;UBERON:0000153!8.86e-11!129;UBERON:0007811!8.86e-11!129;UBERON:0004121!9.95e-11!169;UBERON:0000924!1.98e-10!173;UBERON:0006601!1.98e-10!173;UBERON:0001869!2.62e-10!32;UBERON:0002791!5.42e-10!33;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0001893!1.07e-09!34;UBERON:0000013!3.12e-09!5;UBERON:0002410!3.12e-09!5;UBERON:0000025!8.18e-08!194;UBERON:0001950!1.08e-07!20;UBERON:0002619!4.90e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.53e-66;2!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0000013;2.54e-27;5!UBERON:0002410;2.54e-27;5!UBERON:0001894;9.48e-20;7!UBERON:0000010;1.09e-15;8!UBERON:0000988;2.74e-12;3!UBERON:0002298;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.73e-66,2;UBERON:0003296,1.38e-33,4;UBERON:0010133,1.38e-33,4;UBERON:0000013,2.08e-27,5;UBERON:0002410,2.08e-27,5;UBERON:0001894,1.04e-19,7;UBERON:0006222,1.04e-19,7;UBERON:0000010,9.73e-16,8;UBERON:0000988,2.89e-12,3;UBERON:0001016,2.09e-09,89;UBERON:0002298,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,1.83302179374359,0,2.62103131660833,0,0,0,0,0,0,7.20513673456923,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.21393120847326,1.82129753081038,0,0,0,1.2914249265598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@FAM163A | |||
}} |
Revision as of 22:31, 10 January 2014
Short description: | p5@FAM163A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM163A_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | -276bp_to_ENST00000341785, NM_173509, uc001gnj.2, uc009wxk.2_5end |
EntrezGene: | FAM163A |
HGNC: | 28274 |
UniProt: | Q96GL9A8K8R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.84e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.73e-66 | 2 |
gland of diencephalon | 1.38e-33 | 4 |
neuroendocrine gland | 1.38e-33 | 4 |
sympathetic nervous system | 2.08e-27 | 5 |
autonomic nervous system | 2.08e-27 | 5 |
diencephalon | 1.04e-19 | 7 |
future diencephalon | 1.04e-19 | 7 |
peripheral nervous system | 9.73e-16 | 8 |
pons | 2.89e-12 | 3 |
nervous system | 2.09e-09 | 89 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.86e-23 | 6 |
neuroectodermal tumor | 2.84e-14 | 10 |
germ cell and embryonal cancer | 5.09e-07 | 22 |
germ cell cancer | 5.09e-07 | 22 |