FFCP PHASE1:Hg19::chr1:156631224..156631248,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000448869_5end | |||
|coexpression_cluster_id=C3881 | |||
|description=CAGE_peak_1_at_ENST00000448869_5end | |||
|id=chr1:156631224..156631248,- | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-38!254;CL:0000076!2.05e-11!62;CL:0000220!6.98e-08!246;CL:0000213!8.18e-08!57;CL:0000215!8.18e-08!57;CL:0002321!1.07e-07!248;CL:0002139!7.44e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.02e-08;24!CL:0000076;8.28e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-42,253;CL:0000076,6.07e-12,63;CL:0000213,6.40e-09,58;CL:0000215,6.40e-09,58;CL:0002139,7.13e-08,24;CL:0002078,2.32e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.34e-09;29!UBERON:0001041;6.28e-08;30 | |||
|ontology_enrichment_disease=DOID:162!5.38e-38!235;DOID:14566!7.08e-38!239;DOID:305!7.93e-32!106;DOID:0050687!1.38e-27!143;DOID:0050686!1.77e-15!137;DOID:299!6.52e-07!25;DOID:0050615!6.69e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:305;3.93e-10;106!DOID:0050615;3.11e-08;16!DOID:0050687;8.55e-08;143!DOID:1324;1.54e-07;15!DOID:299;9.11e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.25e-45,235;DOID:14566,6.60e-45,239;DOID:305,1.13e-36,106;DOID:0050687,4.60e-33,143;DOID:0050686,3.80e-18,137;DOID:0050615,3.11e-08,16;DOID:1324,1.54e-07,15;DOID:299,7.24e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.33e-12!155;UBERON:0001555!1.33e-12!155;UBERON:0007026!1.33e-12!155;UBERON:0004119!1.93e-12!169;UBERON:0000925!1.93e-12!169;UBERON:0006595!1.93e-12!169;UBERON:0004921!5.78e-12!129;UBERON:0004185!5.78e-12!129;UBERON:0000077!9.24e-11!130;UBERON:0001041!5.95e-09!98;UBERON:0005177!4.64e-08!107;UBERON:0000466!9.40e-08!126;UBERON:0001048!2.76e-07!168;UBERON:0005409!4.48e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;4.34e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.05e-10,118;UBERON:0005177,3.98e-09,101;UBERON:0001007,4.64e-09,145;UBERON:0001555,4.64e-09,145;UBERON:0007026,4.64e-09,145;UBERON:0004119,2.66e-08,160;UBERON:0000925,2.66e-08,160;UBERON:0006595,2.66e-08,160;UBERON:0001041,4.35e-07,87;UBERON:0002075,5.13e-07,18;UBERON:0005153,5.80e-07,37 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,2.09340350391728,0.436882744260345,0,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0,0,0.492484232307152,0.816002764977012,2.5076377718247,1.71741592278634,2.46373965131192,1.25542639594803,19.2561782484837,16.5022184794391,18.5757443900283,0.393364276848904,0,0,0,0.30120591877825,2.9580320813343,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0,0,0,0.575384784644301,0,0.709446689665756,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0.659702600373432,0,0,0,0,0,0,1.0429658368404,0,1.81619850790011,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0,0.668745981562712,0,0,0,2.78526142212934,0,0,0.812411591295047,1.0247305578054,3.51160238411671,2.46656856905514,8.29050053357545,0.579606171470105,0,0,0,3.51258962362455,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.289648807765598,0,1.34140171940727,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,5.10488012685966,3.32594096193846,5.35792192728069,1.57174890597255,3.64295288292542,1.48313777113772,1.9472843619281,1.74129737299267,1.72845348674525,0,0,0,6.75792185046797,1.72046919021225,5.20710752411391,6.78369530308812,5.87299210693868,5.77747888074142,8.98678356108286,5.42675194255591,6.04802646567407,12.0499420595281,7.25092770796465,13.6848979029332,12.4471649349566,7.35326160691737,4.0507097394088,3.66128885964727,1.12264686313085,3.26573293401634,6.13266549863533,12.3404535743857,4.03043836646896,0,0,1.3082821564276,0,0.12663051166458,5.03154887090231,2.0078563452417,0,1.68203280042692,0,3.7000132262574,0,0.538842688278752,0,1.21085942115945,0.576175924479999,9.84150013701946,0,1.71141546463335,0,0.23486899728753,0,0,1.22492502752936,0.737005903870608,1.13658359293342,2.37600571456411,0.247266929278557,0.910161361938026,0,0.673344455816265,0.875829639103749,1.6623846929051,0,0.612975591598039,0.600952235626387,0,0.358779271377724,0,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0,0.504867548488229,0.184099797284599,1.13152239773168,0,0,0.339121184620975,0.386521706326594,0.545492241181669,0.286804595389004,0.487894824518382,0.132529768321485,1.16193942869518,2.38420426535352,0.504641701751257,0.36497735907583,0,0,0,0,0,19.5206220065742,17.7013924582007,14.7016728228924,19.4117392009013,18.3018733037621,19.2189201479988,12.6741429670555,11.5770664423954,11.1576675514453,2.21446636387394,5.60967095213783,0.8231480226628,0,2.53510069643662,0.982827216677626,1.18157981336281,0,9.9620635219922,1.54411029268673,0.439001141634502,4.49607013030478,0.301586917234893,0.833296006426766,22.8065813717227,2.07986957055916,4.3299402607582,2.89826012437692,1.76113041353732,8.37325397014228,4.1668696131895,4.56609965363036,4.74122638775565,3.43394464837949,0.492434012174795,5.14809383306323,4.31030370637312,0,0,0.567100388969546,3.40322386270824,8.4283842169049,6.9008882249738,12.8092441852945,4.22632483263485,2.07328115540772,0.432359860250884,1.64115163454294,0.063497894292169,1.52795370223311,0,3.4214489204541,0.822619941626588,1.50171528921959,0,2.13049060256185,0.43596006883328,0.66004457238855,0.129271715757778,0,0,1.32969058292435,2.08014873822732,0,0,0.266422179016099,0.57191197463259,1.62786481617433,1.64648067356154,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,39.3418855417281,0,0.215627574859517,0.513372145118994,1.77866236955724,1.30139853857622,0,0.335032530668698,0,0,0,0,1.10422342547226,3.00102312635806,1.08506009479894,1.45579603071565,0.356857977594324,2.20783381047509,2.81139395982512,0,0,0,0,0.368738337083406,1.39013783148933,0.979005787313703,2.05886054286514,0,0.215714200818617,0,0.303127571446259,0,1.20956117331872,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0.492762936082855,0,0.116210378459959,6.28469137876436,3.80962293576241,4.05156351317944,1.37777337797528,1.63882051206045,2.36023946926963,12.1823895485001,6.31525764256201,4.70609861506113,2.92278449306521,7.17751076471555,5.68666920354483,5.4429985688485,0.431831832204279,4.62681758070868,3.79325012561394,3.51182841698397,4.33289664176565,8.31076008928724,4.47749509444357,0.877039506583738,1.3071772551245,2.05160100093111,2.62411716559765,16.5942981278795,1.03041011647722,9.79793273556274,11.3038014891206,1.14853107599234,1.95018073810956,0,1.83674364755032,0.154048617114644,0.614014698904518,1.10269257987624,0.429680979473094,0.435050081742686,1.61930592090592,2.75999310504886,0.165284915360978,0.384380134730212,4.59405764980503,3.0347334256665,0.464845549297286,0,0.6970372701606,1.54016790088044,1.59691809095107,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,1.58189712359363,0.190630193923825,0.511795582622668,0,0.3182032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| |||
|short_description=p1@ENST00000448869 | |||
}} |
Revision as of 21:28, 10 January 2014
Short description: | p1@ENST00000448869 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000448869_5end |
Coexpression cluster: | C3881_squamous_glioblastoma_chronic_somatostatinoma_smallcell_large_lung |
Association with transcript: | -8bp_to_ENST00000448869_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.58e-42 | 253 |
squamous epithelial cell | 6.07e-12 | 63 |
lining cell | 6.40e-09 | 58 |
barrier cell | 6.40e-09 | 58 |
endothelial cell of vascular tree | 7.13e-08 | 24 |
meso-epithelial cell | 2.32e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.05e-10 | 118 |
trunk region element | 3.98e-09 | 101 |
digestive system | 4.64e-09 | 145 |
digestive tract | 4.64e-09 | 145 |
primitive gut | 4.64e-09 | 145 |
endoderm-derived structure | 2.66e-08 | 160 |
endoderm | 2.66e-08 | 160 |
presumptive endoderm | 2.66e-08 | 160 |
foregut | 4.35e-07 | 87 |
viscus | 5.13e-07 | 18 |
epithelial bud | 5.80e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.25e-45 | 235 |
disease of cellular proliferation | 6.60e-45 | 239 |
carcinoma | 1.13e-36 | 106 |
cell type cancer | 4.60e-33 | 143 |
organ system cancer | 3.80e-18 | 137 |
respiratory system cancer | 3.11e-08 | 16 |
lung cancer | 1.54e-07 | 15 |
adenocarcinoma | 7.24e-07 | 25 |