FFCP PHASE1:Hg19::chr1:59041456..59041463,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:59041456..59041463,+ | |||
|id=chr1:59041456..59041463,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.74e-20!254;CL:0002076!8.77e-18!43;CL:0000223!7.95e-12!59;CL:0000076!4.92e-11!62;CL:0002251!1.10e-08!21;CL:0000244!3.01e-08!4;CL:0000731!3.01e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.07e-17;2!CL:0002188;7.01e-08;5!CL:0002149;7.58e-07;6!CL:0002255;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,9.07e-18,2;CL:0002188,7.01e-08,5;CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.48e-18;2!UBERON:0010056;6.48e-18;2 | |||
|ontology_enrichment_disease=DOID:1749!1.46e-21!14;DOID:305!1.80e-11!106;DOID:0050687!9.96e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.58e-34;1!DOID:3149;2.58e-34;1!DOID:3451;6.48e-18;2!DOID:4159;6.48e-18;2!DOID:0060122;6.48e-18;2!DOID:1749;1.90e-10;14!DOID:3001;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.84e-34,1;DOID:3149,1.84e-34,1;DOID:3451,5.48e-18,2;DOID:4159,5.48e-18,2;DOID:0060122,5.48e-18,2;DOID:1749,2.08e-10,14;DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005910!3.15e-13!6;UBERON:0000365!1.06e-10!5;UBERON:0003729!1.55e-10!5;UBERON:0006554!2.25e-09!44;UBERON:0001008!4.20e-09!45;UBERON:0000344!7.79e-09!12;UBERON:0004119!1.18e-08!169;UBERON:0000925!1.18e-08!169;UBERON:0006595!1.18e-08!169;UBERON:0003343!6.86e-08!4;UBERON:0004785!6.86e-08!4;UBERON:0000161!3.12e-07!35;UBERON:0000058!9.77e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.07e-12;3!UBERON:0001033;2.07e-12;3!UBERON:0000014;1.22e-09;4!UBERON:0003343;1.22e-09;4!UBERON:0004785;1.22e-09;4!UBERON:0000964;1.57e-09;4!UBERON:0010409;1.57e-09;4!UBERON:0000974;7.58e-07;6!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.31e-12,3;UBERON:0001033,2.31e-12,3;UBERON:0010056,2.31e-12,3;UBERON:0000014,1.12e-09,4;UBERON:0003343,1.32e-09,4;UBERON:0004785,1.32e-09,4;UBERON:0000964,1.44e-09,4;UBERON:0010409,1.44e-09,4;UBERON:0004348,1.44e-09,4;UBERON:0005427,1.44e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85392221392215,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.910347586283997,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,2.07946199070609,0,0,0,0,0,0.781514011233092,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.240724100067505,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:59041456..59041463,+ | |||
}} |
Revision as of 18:42, 10 January 2014
Short description: | p@chr1:59041456..59041463, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:59041456..59041463, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 9.07e-18 | 2 |
glomerular endothelial cell | 7.01e-08 | 5 |
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.31e-12 | 3 |
gustatory system | 2.31e-12 | 3 |
future tongue | 2.31e-12 | 3 |
zone of skin | 1.12e-09 | 4 |
mucosa of oral region | 1.32e-09 | 4 |
respiratory system mucosa | 1.32e-09 | 4 |
cornea | 1.44e-09 | 4 |
eye surface | 1.44e-09 | 4 |
optic eminence | 1.44e-09 | 4 |
corneal primordium | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.84e-34 | 1 |
keratoacanthoma | 1.84e-34 | 1 |
skin carcinoma | 5.48e-18 | 2 |
skin cancer | 5.48e-18 | 2 |
integumentary system cancer | 5.48e-18 | 2 |
squamous cell carcinoma | 2.08e-10 | 14 |
female reproductive endometrioid cancer | 7.58e-07 | 6 |