FFCP PHASE1:Hg19::chr1:46797583..46797614,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr1:46797583..46797614,- | |||
|id=chr1:46797583..46797614,- | |||
|ontology_enrichment_celltype=CL:1000497!2.33e-23!18;CL:0002518!2.33e-23!18;CL:1000507!6.21e-19!12;CL:1000494!6.21e-19!12;CL:1000449!1.97e-17!16;CL:0000945!1.61e-14!24;CL:0000826!1.61e-14!24;CL:0002681!2.25e-13!13;CL:0002584!2.25e-13!13;CL:0000817!5.11e-12!3;CL:0000239!7.73e-12!3;CL:1000615!7.73e-12!3;CL:0002306!7.73e-12!3;CL:0000039!6.69e-09!7;CL:0000586!6.69e-09!7;CL:0000785!2.16e-08!2;CL:0000955!2.16e-08!2;CL:0000818!2.16e-08!2;CL:0000954!2.16e-08!2;CL:0000816!2.16e-08!2;CL:0000838!2.72e-08!52;CL:0000542!4.35e-08!53;CL:0000051!4.35e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000650;3.54e-24;2!CL:1000500;3.54e-24;2!CL:1000618;3.54e-24;2!CL:1001318;3.54e-24;2!CL:0002173;3.54e-24;2!CL:0000945;2.83e-17;24!CL:0000313;1.61e-13;1!CL:0000817;7.68e-13;1!CL:0000669;1.35e-12;4!CL:1000497;3.32e-11;17!CL:0002518;3.32e-11;17!CL:1000746;1.40e-07;7!CL:1000612;1.40e-07;7!CL:0000159;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.76e-24,2;CL:1000500,3.76e-24,2;CL:1000618,3.76e-24,2;CL:1001318,3.76e-24,2;CL:0002173,3.76e-24,2;CL:0000945,3.08e-17,24;CL:0000826,3.08e-17,24;CL:0000313,1.61e-13,1;CL:0000669,1.39e-12,4;CL:1000497,3.23e-11,17;CL:0002518,3.23e-11,17;CL:0000838,1.84e-10,52;CL:0000542,2.99e-10,53;CL:0000051,2.99e-10,53;CL:1000746,1.43e-07,7;CL:1000612,1.43e-07,7;CL:0000159,2.15e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.61e-13;1!DOID:4468;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.61e-13,1;DOID:4468,2.74e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.70e-28!27;UBERON:0003918!3.70e-28!27;UBERON:0005095!3.70e-28!27;UBERON:0007687!3.70e-28!27;UBERON:0003887!1.95e-23!21;UBERON:0000489!3.43e-23!32;UBERON:0000080!4.15e-23!18;UBERON:0002120!4.15e-23!18;UBERON:0004875!4.15e-23!18;UBERON:0005721!4.15e-23!18;UBERON:0005754!4.15e-23!18;UBERON:0007297!4.15e-23!18;UBERON:0006554!1.18e-20!44;UBERON:0004876!1.46e-20!20;UBERON:0006555!3.40e-20!17;UBERON:0005103!3.40e-20!17;UBERON:0000083!3.40e-20!17;UBERON:0009201!3.40e-20!17;UBERON:0004819!3.40e-20!17;UBERON:0006553!3.40e-20!17;UBERON:0003074!3.40e-20!17;UBERON:0003060!3.40e-20!17;UBERON:0001008!4.19e-20!45;UBERON:0009773!6.21e-19!12;UBERON:0001231!6.21e-19!12;UBERON:0004810!6.21e-19!12;UBERON:0004211!1.97e-17!16;UBERON:0001285!1.97e-17!16;UBERON:0007684!1.97e-17!16;UBERON:0003220!1.97e-17!16;UBERON:0004208!1.97e-17!16;UBERON:0003886!6.26e-17!63;UBERON:0005172!7.95e-16!55;UBERON:0005173!7.95e-16!55;UBERON:0000058!2.79e-15!26;UBERON:0002553!8.92e-15!70;UBERON:0002417!7.19e-14!61;UBERON:0000916!7.19e-14!61;UBERON:0001225!2.25e-13!13;UBERON:0008987!2.25e-13!13;UBERON:0003135!5.67e-12!11;UBERON:0003064!5.77e-12!37;UBERON:0006853!7.73e-12!3;UBERON:0007685!7.73e-12!3;UBERON:0004134!7.73e-12!3;UBERON:0000473!8.45e-12!8;UBERON:0001851!1.11e-10!16;UBERON:0000353!5.41e-10!17;UBERON:0003103!6.75e-09!69;UBERON:0000464!1.67e-08!104;UBERON:0000991!5.70e-08!21;UBERON:0009196!5.70e-08!21;UBERON:0009117!5.70e-08!21;UBERON:0005564!5.70e-08!21;UBERON:0004176!1.46e-07!22;UBERON:0003101!1.88e-07!22;UBERON:0000079!1.88e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;3.54e-24;2!UBERON:0003838;3.54e-24;2!UBERON:0003586;3.54e-24;2!UBERON:0005169;3.54e-24;2!UBERON:0002321;3.54e-24;2!UBERON:0005215;3.54e-24;2!UBERON:0002303;3.54e-24;2!UBERON:0002319;3.54e-24;2!UBERON:0004911;1.61e-13;1!UBERON:0005795;7.68e-13;1!UBERON:0003891;1.35e-12;4!UBERON:0002113;5.34e-08;24!UBERON:0011143;5.34e-08;24!UBERON:0000074;1.40e-07;7!UBERON:0001229;1.40e-07;7!UBERON:0004909;2.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.76e-24,2;UBERON:0003838,3.76e-24,2;UBERON:0003586,3.76e-24,2;UBERON:0005169,3.76e-24,2;UBERON:0002321,3.76e-24,2;UBERON:0005215,3.76e-24,2;UBERON:0002303,3.76e-24,2;UBERON:0002319,3.76e-24,2;UBERON:0004911,1.61e-13,1;UBERON:0003891,1.39e-12,4;UBERON:0003887,2.61e-09,12;UBERON:0010532,1.43e-07,7;UBERON:0000074,1.43e-07,7;UBERON:0001229,1.43e-07,7;UBERON:0001230,1.43e-07,7;UBERON:0003220,1.43e-07,7;UBERON:0005749,1.43e-07,7;UBERON:0004199,1.43e-07,7;UBERON:0004209,1.43e-07,7;UBERON:0004198,1.43e-07,7;UBERON:0002113,2.10e-07,26;UBERON:0003918,2.10e-07,26;UBERON:0011143,2.10e-07,26;UBERON:0005095,2.10e-07,26;UBERON:0007687,2.10e-07,26;UBERON:0004909,2.15e-07,2;UBERON:0005103,9.94e-07,8;UBERON:0000083,9.94e-07,8;UBERON:0009201,9.94e-07,8;UBERON:0006553,9.94e-07,8;UBERON:0003074,9.94e-07,8;UBERON:0003060,9.94e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81404456212093,2.38091709404843,4.72264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,1.08378575017541,2.50844886927427,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09244169283818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,4.08082020397869,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0.236417121897595,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0.078493092850514,0,0,0,2.15927591218621,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,1.24082554265728,0.955538938977433,5.25720529449624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89888196257365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0.26721740526556,4.59474497674225,0,0.0757786982182394,0,0,0,0,0,0.322944549180031,0.248298857183432,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0.641136984606466 | |||
|short_description=p@chr1:46797583..46797614,- | |||
}} |
Revision as of 18:24, 10 January 2014
Short description: | p@chr1:46797583..46797614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:46797583..46797614, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.76e-24 | 2 |
kidney interstitial cell | 3.76e-24 | 2 |
juxtaglomerular complex cell | 3.76e-24 | 2 |
renal interstitial pericyte | 3.76e-24 | 2 |
extraglomerular mesangial cell | 3.76e-24 | 2 |
lymphocyte of B lineage | 3.08e-17 | 24 |
pro-B cell | 3.08e-17 | 24 |
serous secreting cell | 1.61e-13 | 1 |
pericyte cell | 1.39e-12 | 4 |
kidney cell | 3.23e-11 | 17 |
kidney epithelial cell | 3.23e-11 | 17 |
lymphoid lineage restricted progenitor cell | 1.84e-10 | 52 |
lymphocyte | 2.99e-10 | 53 |
common lymphoid progenitor | 2.99e-10 | 53 |
glomerular cell | 1.43e-07 | 7 |
kidney corpuscule cell | 1.43e-07 | 7 |
seromucus secreting cell | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 3.76e-24 | 2 |
abdominal segment connective tissue | 3.76e-24 | 2 |
trunk connective tissue | 3.76e-24 | 2 |
interstitial tissue | 3.76e-24 | 2 |
extraglomerular mesangium | 3.76e-24 | 2 |
kidney interstitium | 3.76e-24 | 2 |
juxtaglomerular apparatus | 3.76e-24 | 2 |
mesangium | 3.76e-24 | 2 |
epithelium of female gonad | 1.61e-13 | 1 |
stroma | 1.39e-12 | 4 |
intraembryonic coelom | 2.61e-09 | 12 |
primitive nephron | 1.43e-07 | 7 |
renal glomerulus | 1.43e-07 | 7 |
renal corpuscle | 1.43e-07 | 7 |
glomerular capsule | 1.43e-07 | 7 |
metanephric mesenchyme | 1.43e-07 | 7 |
glomerular tuft | 1.43e-07 | 7 |
S-shaped body | 1.43e-07 | 7 |
renal vesicle | 1.43e-07 | 7 |
comma-shaped body | 1.43e-07 | 7 |
kidney | 2.10e-07 | 26 |
kidney mesenchyme | 2.10e-07 | 26 |
upper urinary tract | 2.10e-07 | 26 |
kidney rudiment | 2.10e-07 | 26 |
kidney field | 2.10e-07 | 26 |
epithelium of gonad | 2.15e-07 | 2 |
mesonephric epithelium | 9.94e-07 | 8 |
mesonephric tubule | 9.94e-07 | 8 |
nephric duct | 9.94e-07 | 8 |
renal duct | 9.94e-07 | 8 |
mesonephric duct | 9.94e-07 | 8 |
pronephric duct | 9.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.61e-13 | 1 |
clear cell adenocarcinoma | 2.74e-07 | 2 |