FFCP PHASE1:Hg19::chr1:17248418..17248435,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21299 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TZA2 | |||
|association_with_transcript=-9bp_to_ENST00000375541,NM_014675,uc001azt.2_5end | |||
|description=CAGE_peak_1_at_CROCC_5end | |||
|id=chr1:17248418..17248435,+ | |||
|ontology_enrichment_celltype=CL:0000147!3.13e-13!14;CL:0000133!4.46e-11!59;CL:0000148!1.53e-10!10;CL:0000541!1.53e-10!10;CL:0000333!6.11e-09!41;CL:0000221!1.38e-08!71;CL:0002319!2.50e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.04e-23;14!CL:0000148;1.15e-20;10!CL:0002322;3.35e-12;5!CL:0000710;3.79e-09;20!CL:0000149;1.44e-08;4!CL:0002321;1.70e-08;15!CL:0002567;3.80e-07;3!CL:0002618;4.60e-07;3!CL:0002586;8.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,5.03e-24,14;CL:0000148,6.23e-21,10;CL:0000541,6.23e-21,10;CL:0002322,3.19e-12,5;CL:0000710,2.86e-09,20;CL:0000149,1.06e-08,4;CL:0000133,2.69e-08,59;CL:0000333,5.15e-08,41;CL:0002567,2.63e-07,3;CL:0002618,5.28e-07,3;CL:0002586,7.07e-07,3;CL:0000221,9.45e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.94e-09!22;DOID:2994!1.94e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.73e-13;22!DOID:2994;1.73e-13;22!DOID:171;6.38e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.56e-13,22;DOID:2994,1.56e-13,22;DOID:171,5.77e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.16e-28!94;UBERON:0001016!5.16e-28!94;UBERON:0005743!1.78e-25!86;UBERON:0002346!6.04e-25!90;UBERON:0001017!1.63e-22!82;UBERON:0003075!2.05e-22!86;UBERON:0007284!2.05e-22!86;UBERON:0001049!1.44e-19!57;UBERON:0005068!1.44e-19!57;UBERON:0006241!1.44e-19!57;UBERON:0007135!1.44e-19!57;UBERON:0002616!3.49e-18!59;UBERON:0000955!1.96e-17!69;UBERON:0006238!1.96e-17!69;UBERON:0000924!2.84e-17!173;UBERON:0006601!2.84e-17!173;UBERON:0003056!8.15e-16!61;UBERON:0004121!2.03e-15!169;UBERON:0000153!9.25e-13!129;UBERON:0007811!9.25e-13!129;UBERON:0002780!9.54e-13!41;UBERON:0001890!9.54e-13!41;UBERON:0006240!9.54e-13!41;UBERON:0003080!3.36e-12!42;UBERON:0000033!1.03e-11!123;UBERON:0002020!6.36e-10!34;UBERON:0003528!6.36e-10!34;UBERON:0001893!1.22e-09!34;UBERON:0002791!2.59e-09!33;UBERON:0004733!3.66e-09!12;UBERON:0002028!3.66e-09!12;UBERON:0007277!3.66e-09!12;UBERON:0003076!3.92e-09!15;UBERON:0003057!3.92e-09!15;UBERON:0001869!1.18e-08!32;UBERON:0004732!3.68e-08!13;UBERON:0000119!2.23e-07!312;UBERON:0000483!3.97e-07!309;UBERON:0007023!5.12e-07!115;UBERON:0000064!7.44e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.99e-11;5!UBERON:0005388;2.99e-11;5!UBERON:0001802;2.99e-11;5!UBERON:0002298;3.83e-09;6!UBERON:0001896;1.24e-07;3!UBERON:0005290;1.24e-07;3!UBERON:0000922;2.32e-07;49!UBERON:0001781;8.40e-07;3!UBERON:0001782;8.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-09,89;UBERON:0000966,2.36e-09,6;UBERON:0005388,2.36e-09,6;UBERON:0001802,2.36e-09,6;UBERON:0002346,3.86e-09,86;UBERON:0002298,4.82e-09,6;UBERON:0001017,2.94e-08,81;UBERON:0001896,1.43e-07,3;UBERON:0005290,1.43e-07,3;UBERON:0010096,1.43e-07,3;UBERON:0003075,3.30e-07,82;UBERON:0007284,3.30e-07,82;UBERON:0001049,4.44e-07,56;UBERON:0005068,4.44e-07,56;UBERON:0006241,4.44e-07,56;UBERON:0007135,4.44e-07,56;UBERON:0001782,7.07e-07,3;UBERON:0005424,7.07e-07,3;UBERON:0000073,9.72e-07,53;UBERON:0002616,9.72e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0.85870796139317,0.958120975510189,0.502170558379211,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,5.34523684004081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.566546713487831,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,1.10047216776027,0,0.516833518338658,0.35576626268671,0.33472061276467,1.61131726843659,0,0,0.367663080345869,0,2.14319347881791,3.36794058939255,2.70267553159973,0,0,0.549605231791222,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6852654374779,7.81925633096763,8.13357600086629,8.81118967630649,7.31730467539322,16.7889585174882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,1.47008711385542,0,0,1.77236972004421,2.6487785964879,0,0.343135620597051,0,0,0,1.11106134190236,0,0,0,0.463721619900307,0,0.721832238805369,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0,0,2.92090313743978,1.90994212779139,5.86087236050235,5.13217338068116,5.44985711327615,2.70308752059526,2.28661146104463,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,3.25046917581229,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,5.68666920354483,2.89159298970077,0.863663664408557,1.54227252690289,0,0,0.254876273045038,0,0.671624264166535,0,0,2.56450125116389,3.93617574839647,1.62689197332152,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0.15350367472613,0.551346289938122,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0.699869440489966,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,8.43910161907038,0,0,0,0.432807638929335,0.213425530045242,2.39139409093234,0,0,2.32840940996271,0,0.842391534340376,0,0.156679895773023,2.50634477090067,1.35433422241283,0,0,0.425846237690326,0.343505344755765,0,0,0,0,10.301028434124,0,0.540911356951966,5.32915148796512,0,0,0.73254089635947,0.121360521749513,1.22587722705226,0,0,0,0,0,1.1253553312841,0,0,1.05562704063997,0,0,2.77126022639704,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,2.65722415744152,4.10027891326387,1.52581736317083,0.663475559587348,0.886642856860642,0.87754158861589,0,0,0.153900517007594,0,0.69169171316418,0,0,0,0,0,5.10966490978682,0,0.997270091400938,0,0,0,0,0.635746315921515,0,0,0.141353071433941,1.51472047819464,0,0,0,0.296521128680622,1.35920332841153,1.35748534357092,2.69604531922708,0.802577647298789,2.57690890297873,0.364909578431332,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0,0.617792886840502,12.6549214837098,0.685209623233754,0.794858446811959,0.253243183823515,0,0,0.213452994739353,0,0,0,0.857974989309823,0,0.99402028452346,0,0.135904206073614,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,3.49487848582361,0,0,0,0,0,0,2.58786471611994,11.2527203925513,14.9917985890985,13.7095311549631,0,0,0.850493793212345,0,0,0.209818352539992,0.316801009558219,0,0,0,0,0,0,0,0,0,1.8881279772348,0,0,0,0,1.29282956361551,4.76037366273684,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,8.027728739661,8.65246601987448,2.29756690883119,19.783854795881,0,0.909894705249887,0.856396000634902,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0.578742114812744,0,0,0.690860683462397,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,1.1860729253635,2.98805289526203,0.655257829152084,2.88545300921843,3.61377364172861,0.371807292777007,5.02780426175919,0,0,0,0,0,1.28458450192919,0,0.478901577171454,0.41023272848151,0.504143392443436,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,1.79024599904647,0.225630985047772,0,0,0,0.163771917510097,0,0.270150338473579,0,0,0.0634158101939068,1.09394961803644,0,0,1.58284119923659,0,1.60710550763486,6.053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| |||
|short_description=p1@CROCC | |||
}} |
Revision as of 16:38, 10 January 2014
Short description: | p1@CROCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CROCC_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000375541, NM_014675, uc001azt.2_5end |
EntrezGene: | CROCC |
HGNC: | 21299 |
UniProt: | Q5TZA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 5.03e-24 | 14 |
melanocyte | 6.23e-21 | 10 |
melanoblast | 6.23e-21 | 10 |
embryonic stem cell | 3.19e-12 | 5 |
neurecto-epithelial cell | 2.86e-09 | 20 |
visual pigment cell | 1.06e-08 | 4 |
neurectodermal cell | 2.69e-08 | 59 |
migratory neural crest cell | 5.15e-08 | 41 |
light melanocyte | 2.63e-07 | 3 |
endothelial cell of umbilical vein | 5.28e-07 | 3 |
retinal pigment epithelial cell | 7.07e-07 | 3 |
ectodermal cell | 9.45e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.26e-09 | 89 |
retina | 2.36e-09 | 6 |
photoreceptor array | 2.36e-09 | 6 |
posterior segment of eyeball | 2.36e-09 | 6 |
neurectoderm | 3.86e-09 | 86 |
brainstem | 4.82e-09 | 6 |
central nervous system | 2.94e-08 | 81 |
medulla oblongata | 1.43e-07 | 3 |
myelencephalon | 1.43e-07 | 3 |
future myelencephalon | 1.43e-07 | 3 |
neural plate | 3.30e-07 | 82 |
presumptive neural plate | 3.30e-07 | 82 |
neural tube | 4.44e-07 | 56 |
neural rod | 4.44e-07 | 56 |
future spinal cord | 4.44e-07 | 56 |
neural keel | 4.44e-07 | 56 |
pigmented layer of retina | 7.07e-07 | 3 |
presumptive retinal pigmented epithelium | 7.07e-07 | 3 |
regional part of nervous system | 9.72e-07 | 53 |
regional part of brain | 9.72e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.56e-13 | 22 |
germ cell cancer | 1.56e-13 | 22 |
neuroectodermal tumor | 5.77e-07 | 10 |