FFCP PHASE1:Mm9::chrX:161765029..161765057,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=237213|HGNC=|MCL_coexpression_id=87|UniProt=Q3UTL8,Q7TNC8,Q8C3J3|association_with_transcript=-116bp_to_NM_183427,uc009uwb.1_5end|description=CAGE_peak_3_at_Glra2_5end|id=chrX:161765029..161765057,-|ontology_enrichment_celltype=CL:0000117!1.13e-19!23;CL:0000337!1.13e-19!23;CL:0000540!2.27e-11!33;CL:0000047!2.27e-11!33;CL:0000031!2.27e-11!33;CL:0000404!2.27e-11!33;CL:0000393!1.56e-08!39;CL:0000211!1.56e-08!39;CL:0002319!4.04e-07!43;CL:0000221!8.20e-07!44;CL:0000133!8.20e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-24,23;CL:0000337,3.55e-24,23;CL:0000540,8.13e-16,33;CL:0000047,8.13e-16,33;CL:0000031,8.13e-16,33;CL:0000404,8.13e-16,33;CL:0000393,7.29e-13,39;CL:0000211,7.29e-13,39;CL:0002319,2.35e-11,43;CL:0000221,5.06e-11,44;CL:0000133,5.06e-11,44;CL:0002612,8.49e-10,3;CL:0002610,5.35e-09,3;CL:0002614,1.12e-08,3;CL:0002613,1.60e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.84e-28!52;UBERON:0005068!2.84e-28!52;UBERON:0006241!2.84e-28!52;UBERON:0007135!2.84e-28!52;UBERON:0000033!1.30e-25!63;UBERON:0000955!1.70e-25!50;UBERON:0006238!1.70e-25!50;UBERON:0002616!5.58e-25!49;UBERON:0003056!1.58e-24!49;UBERON:0002346!1.80e-24!71;UBERON:0003075!1.80e-24!71;UBERON:0007284!1.80e-24!71;UBERON:0001017!1.80e-23!73;UBERON:0005743!1.80e-23!73;UBERON:0000073!2.09e-22!75;UBERON:0001016!2.09e-22!75;UBERON:0003080!7.75e-22!40;UBERON:0002780!8.51e-21!39;UBERON:0001890!8.51e-21!39;UBERON:0006240!8.51e-21!39;UBERON:0002020!1.04e-20!34;UBERON:0004121!5.17e-18!102;UBERON:0000924!5.17e-18!102;UBERON:0006601!5.17e-18!102;UBERON:0002791!2.10e-15!29;UBERON:0003528!2.10e-15!29;UBERON:0001893!2.10e-15!29;UBERON:0007811!1.15e-14!86;UBERON:0000153!3.41e-12!94;UBERON:0002420!1.56e-09!8;UBERON:0007245!1.56e-09!8;UBERON:0010009!1.56e-09!8;UBERON:0010011!1.56e-09!8;UBERON:0000454!1.56e-09!8;UBERON:0000956!3.32e-08!21;UBERON:0001869!3.32e-08!21;UBERON:0000203!3.32e-08!21;UBERON:0002240!6.39e-08!6;UBERON:0005174!6.39e-08!6;UBERON:0001137!6.39e-08!6;UBERON:0002298!2.43e-07!6;UBERON:0001948!4.58e-07!5;UBERON:0002315!4.58e-07!5;UBERON:0003076!6.69e-07!12;UBERON:0003057!6.69e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.57e-29,54;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0001017,3.38e-24,73;UBERON:0001016,2.14e-23,75;UBERON:0002420,2.01e-20,8;UBERON:0007245,2.01e-20,8;UBERON:0010009,2.01e-20,8;UBERON:0010011,2.01e-20,8;UBERON:0000454,2.01e-20,8;UBERON:0002346,9.48e-20,64;UBERON:0003075,9.48e-20,64;UBERON:0007284,9.48e-20,64;UBERON:0002020,2.92e-17,34;UBERON:0004121,3.15e-17,95;UBERON:0000924,3.15e-17,95;UBERON:0006601,3.15e-17,95;UBERON:0010371,1.17e-16,73;UBERON:0002240,1.30e-16,6;UBERON:0005174,1.30e-16,6;UBERON:0001137,1.30e-16,6;UBERON:0003080,4.64e-16,40;UBERON:0002616,2.87e-15,46;UBERON:0000955,7.39e-15,47;UBERON:0006238,7.39e-15,47;UBERON:0001948,1.35e-14,5;UBERON:0002315,1.35e-14,5;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0000369,2.45e-13,5;UBERON:0002435,2.45e-13,5;UBERON:0000204,2.45e-13,5;UBERON:0010082,2.45e-13,5;UBERON:0003056,2.08e-12,49;UBERON:0010314,4.02e-12,92;UBERON:0002950,3.74e-11,4;UBERON:0001891,3.74e-11,4;UBERON:0009616,3.74e-11,4;UBERON:0010286,3.74e-11,4;UBERON:0003076,1.43e-10,12;UBERON:0003057,1.43e-10,12;UBERON:0002257,8.49e-10,3;UBERON:0003528,4.97e-09,29;UBERON:0002791,4.97e-09,29;UBERON:0001893,4.97e-09,29;UBERON:0004684,5.35e-09,3;UBERON:0002275,5.35e-09,3;UBERON:0000025,9.15e-09,114;UBERON:0002038,1.12e-08,3;UBERON:0009663,1.12e-08,3;UBERON:0009661,1.12e-08,3;UBERON:0000125,1.12e-08,3;UBERON:0002308,1.12e-08,3;UBERON:0004111,7.57e-08,122;UBERON:0001894,6.23e-07,10;UBERON:0006222,6.23e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,4.19650227808066,0.61245399607477,0.862609239164127,0.919218786610021,3.30347642998166,1.27687338085188,2.4577045320999,1.05509030184155,1.55528994124096,3.12548022334056,1.11673199600552,3.37657566019008,1.68078072554491,4.71405736757868,7.83044244395066,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,1.21677024134594,0.255715457330331,2.90903262383384,1.46017136760982,0,0,0,0,0.130120442962704,0,0.540186389416048,0.30140963567143,0.680364991513279,0.896796041993948,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0,0,0.428674070063185,2.6601035046341,2.31879462882692,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,1.02440163452481,1.21553358534147,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,0,0.758091635291392,0.760437899670719,0.377252682772152,1.12369808963859,0.512201219238954,0.459483751644906,0,0.347652977834566,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0.846984423737976,0.25384382367503,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.394017929502254,1.22769312950907,0.929621047115796,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0|short_description=p3@Glra2}} | ||
|EntrezGene=237213 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=Q3UTL8,Q7TNC8,Q8C3J3 | |||
|association_with_transcript=-116bp_to_NM_183427,uc009uwb.1_5end | |||
|description=CAGE_peak_3_at_Glra2_5end | |||
|id=chrX:161765029..161765057,- | |||
|ontology_enrichment_celltype=CL:0000117!1.13e-19!23;CL:0000337!1.13e-19!23;CL:0000540!2.27e-11!33;CL:0000047!2.27e-11!33;CL:0000031!2.27e-11!33;CL:0000404!2.27e-11!33;CL:0000393!1.56e-08!39;CL:0000211!1.56e-08!39;CL:0002319!4.04e-07!43;CL:0000221!8.20e-07!44;CL:0000133!8.20e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-24,23;CL:0000337,3.55e-24,23;CL:0000540,8.13e-16,33;CL:0000047,8.13e-16,33;CL:0000031,8.13e-16,33;CL:0000404,8.13e-16,33;CL:0000393,7.29e-13,39;CL:0000211,7.29e-13,39;CL:0002319,2.35e-11,43;CL:0000221,5.06e-11,44;CL:0000133,5.06e-11,44;CL:0002612,8.49e-10,3;CL:0002610,5.35e-09,3;CL:0002614,1.12e-08,3;CL:0002613,1.60e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.84e-28!52;UBERON:0005068!2.84e-28!52;UBERON:0006241!2.84e-28!52;UBERON:0007135!2.84e-28!52;UBERON:0000033!1.30e-25!63;UBERON:0000955!1.70e-25!50;UBERON:0006238!1.70e-25!50;UBERON:0002616!5.58e-25!49;UBERON:0003056!1.58e-24!49;UBERON:0002346!1.80e-24!71;UBERON:0003075!1.80e-24!71;UBERON:0007284!1.80e-24!71;UBERON:0001017!1.80e-23!73;UBERON:0005743!1.80e-23!73;UBERON:0000073!2.09e-22!75;UBERON:0001016!2.09e-22!75;UBERON:0003080!7.75e-22!40;UBERON:0002780!8.51e-21!39;UBERON:0001890!8.51e-21!39;UBERON:0006240!8.51e-21!39;UBERON:0002020!1.04e-20!34;UBERON:0004121!5.17e-18!102;UBERON:0000924!5.17e-18!102;UBERON:0006601!5.17e-18!102;UBERON:0002791!2.10e-15!29;UBERON:0003528!2.10e-15!29;UBERON:0001893!2.10e-15!29;UBERON:0007811!1.15e-14!86;UBERON:0000153!3.41e-12!94;UBERON:0002420!1.56e-09!8;UBERON:0007245!1.56e-09!8;UBERON:0010009!1.56e-09!8;UBERON:0010011!1.56e-09!8;UBERON:0000454!1.56e-09!8;UBERON:0000956!3.32e-08!21;UBERON:0001869!3.32e-08!21;UBERON:0000203!3.32e-08!21;UBERON:0002240!6.39e-08!6;UBERON:0005174!6.39e-08!6;UBERON:0001137!6.39e-08!6;UBERON:0002298!2.43e-07!6;UBERON:0001948!4.58e-07!5;UBERON:0002315!4.58e-07!5;UBERON:0003076!6.69e-07!12;UBERON:0003057!6.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.57e-29,54;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0001017,3.38e-24,73;UBERON:0001016,2.14e-23,75;UBERON:0002420,2.01e-20,8;UBERON:0007245,2.01e-20,8;UBERON:0010009,2.01e-20,8;UBERON:0010011,2.01e-20,8;UBERON:0000454,2.01e-20,8;UBERON:0002346,9.48e-20,64;UBERON:0003075,9.48e-20,64;UBERON:0007284,9.48e-20,64;UBERON:0002020,2.92e-17,34;UBERON:0004121,3.15e-17,95;UBERON:0000924,3.15e-17,95;UBERON:0006601,3.15e-17,95;UBERON:0010371,1.17e-16,73;UBERON:0002240,1.30e-16,6;UBERON:0005174,1.30e-16,6;UBERON:0001137,1.30e-16,6;UBERON:0003080,4.64e-16,40;UBERON:0002616,2.87e-15,46;UBERON:0000955,7.39e-15,47;UBERON:0006238,7.39e-15,47;UBERON:0001948,1.35e-14,5;UBERON:0002315,1.35e-14,5;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0000369,2.45e-13,5;UBERON:0002435,2.45e-13,5;UBERON:0000204,2.45e-13,5;UBERON:0010082,2.45e-13,5;UBERON:0003056,2.08e-12,49;UBERON:0010314,4.02e-12,92;UBERON:0002950,3.74e-11,4;UBERON:0001891,3.74e-11,4;UBERON:0009616,3.74e-11,4;UBERON:0010286,3.74e-11,4;UBERON:0003076,1.43e-10,12;UBERON:0003057,1.43e-10,12;UBERON:0002257,8.49e-10,3;UBERON:0003528,4.97e-09,29;UBERON:0002791,4.97e-09,29;UBERON:0001893,4.97e-09,29;UBERON:0004684,5.35e-09,3;UBERON:0002275,5.35e-09,3;UBERON:0000025,9.15e-09,114;UBERON:0002038,1.12e-08,3;UBERON:0009663,1.12e-08,3;UBERON:0009661,1.12e-08,3;UBERON:0000125,1.12e-08,3;UBERON:0002308,1.12e-08,3;UBERON:0004111,7.57e-08,122;UBERON:0001894,6.23e-07,10;UBERON:0006222,6.23e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,4.19650227808066,0.61245399607477,0.862609239164127,0.919218786610021,3.30347642998166,1.27687338085188,2.4577045320999,1.05509030184155,1.55528994124096,3.12548022334056,1.11673199600552,3.37657566019008,1.68078072554491,4.71405736757868,7.83044244395066,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,1.21677024134594,0.255715457330331,2.90903262383384,1.46017136760982,0,0,0,0,0.130120442962704,0,0.540186389416048,0.30140963567143,0.680364991513279,0.896796041993948,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0,0,0.428674070063185,2.6601035046341,2.31879462882692,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,1.02440163452481,1.21553358534147,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,0,0.758091635291392,0.760437899670719,0.377252682772152,1.12369808963859,0.512201219238954,0.459483751644906,0,0.347652977834566,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0.846984423737976,0.25384382367503,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.394017929502254,1.22769312950907,0.929621047115796,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0 | |||
|short_description=p3@Glra2 | |||
}} |
Revision as of 19:39, 14 September 2013
Short description: | p3@Glra2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Glra2_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -116bp_to_NM_183427, uc009uwb.1_5end |
EntrezGene: | Glra2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.55e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-24 | 23 |
neuron | 8.13e-16 | 33 |
neuronal stem cell | 8.13e-16 | 33 |
neuroblast | 8.13e-16 | 33 |
electrically signaling cell | 8.13e-16 | 33 |
electrically responsive cell | 7.29e-13 | 39 |
electrically active cell | 7.29e-13 | 39 |
neural cell | 2.35e-11 | 43 |
ectodermal cell | 5.06e-11 | 44 |
neurectodermal cell | 5.06e-11 | 44 |
neuron of the ventral spinal cord | 8.49e-10 | 3 |
raphe nuclei neuron | 5.35e-09 | 3 |
neuron of the substantia nigra | 1.12e-08 | 3 |
striatum neuron | 1.60e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.