FFCP PHASE1:Mm9::chr9:75445450..75445463,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50876|HGNC=|MCL_coexpression_id=724|UniProt=Q9JKK7|association_with_transcript=0bp_to_ENSMUST00000164100,uc009qsj.1_5end|description=CAGE_peak_8_at_Tmod2_5end|id=chr9:75445450..75445463,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.63e-15,3;CL:0000217,1.67e-11,2;CL:0000328,1.67e-11,2;CL:0002573,1.67e-11,2;CL:0002376,1.67e-11,2;CL:0000218,1.67e-11,2;CL:0000692,1.67e-11,2;CL:0002377,1.67e-11,2;CL:0002375,1.67e-11,2;CL:0000215,5.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.70e-10!102;UBERON:0000924!4.70e-10!102;UBERON:0006601!4.70e-10!102;UBERON:0002298!1.12e-09!6;UBERON:0000073!1.81e-09!75;UBERON:0001016!1.81e-09!75;UBERON:0000033!1.94e-09!63;UBERON:0000955!2.59e-09!50;UBERON:0006238!2.59e-09!50;UBERON:0002616!1.49e-08!49;UBERON:0001017!5.21e-08!73;UBERON:0005743!5.21e-08!73;UBERON:0001049!1.89e-07!52;UBERON:0005068!1.89e-07!52;UBERON:0006241!1.89e-07!52;UBERON:0007135!1.89e-07!52;UBERON:0002950!9.27e-07!4;UBERON:0001891!9.27e-07!4;UBERON:0009616!9.27e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.63e-15,3;UBERON:0002275,1.63e-15,3;UBERON:0001896,7.13e-12,2;UBERON:0002298,7.13e-12,2;UBERON:0005290,7.13e-12,2;UBERON:0010096,7.13e-12,2;UBERON:0001016,7.84e-12,75;UBERON:0004121,2.08e-10,95;UBERON:0000924,2.08e-10,95;UBERON:0006601,2.08e-10,95;UBERON:0000073,3.16e-10,54;UBERON:0001017,1.10e-08,73;UBERON:0004733,1.14e-08,6;UBERON:0004732,1.14e-08,6;UBERON:0002028,1.14e-08,6;UBERON:0007277,1.14e-08,6;UBERON:0003076,2.00e-07,12;UBERON:0003057,2.00e-07,12;UBERON:0001049,3.45e-07,52;UBERON:0005068,3.45e-07,52;UBERON:0006241,3.45e-07,52;UBERON:0007135,3.45e-07,52;UBERON:0001851,8.36e-07,1;UBERON:0005889,8.36e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,1.68967186581868,0,0,0,0.837548997004143,0.56276261003168,1.5279824777681,0,0,0.186399445825301,1.28734528666413,7.85944225110569,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.69623150928681,2.28750301409313,0.125654352112864,0.695297280769106,3.58001640262463,1.66230435647648,4.38051410282946,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0.841159794256509,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,8.08760637486202,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,0,0|short_description=p8@Tmod2}} | ||
|EntrezGene=50876 | |||
|HGNC= | |||
|MCL_coexpression_id=724 | |||
|UniProt=Q9JKK7 | |||
|association_with_transcript=0bp_to_ENSMUST00000164100,uc009qsj.1_5end | |||
|description=CAGE_peak_8_at_Tmod2_5end | |||
|id=chr9:75445450..75445463,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.63e-15,3;CL:0000217,1.67e-11,2;CL:0000328,1.67e-11,2;CL:0002573,1.67e-11,2;CL:0002376,1.67e-11,2;CL:0000218,1.67e-11,2;CL:0000692,1.67e-11,2;CL:0002377,1.67e-11,2;CL:0002375,1.67e-11,2;CL:0000215,5.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.70e-10!102;UBERON:0000924!4.70e-10!102;UBERON:0006601!4.70e-10!102;UBERON:0002298!1.12e-09!6;UBERON:0000073!1.81e-09!75;UBERON:0001016!1.81e-09!75;UBERON:0000033!1.94e-09!63;UBERON:0000955!2.59e-09!50;UBERON:0006238!2.59e-09!50;UBERON:0002616!1.49e-08!49;UBERON:0001017!5.21e-08!73;UBERON:0005743!5.21e-08!73;UBERON:0001049!1.89e-07!52;UBERON:0005068!1.89e-07!52;UBERON:0006241!1.89e-07!52;UBERON:0007135!1.89e-07!52;UBERON:0002950!9.27e-07!4;UBERON:0001891!9.27e-07!4;UBERON:0009616!9.27e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.63e-15,3;UBERON:0002275,1.63e-15,3;UBERON:0001896,7.13e-12,2;UBERON:0002298,7.13e-12,2;UBERON:0005290,7.13e-12,2;UBERON:0010096,7.13e-12,2;UBERON:0001016,7.84e-12,75;UBERON:0004121,2.08e-10,95;UBERON:0000924,2.08e-10,95;UBERON:0006601,2.08e-10,95;UBERON:0000073,3.16e-10,54;UBERON:0001017,1.10e-08,73;UBERON:0004733,1.14e-08,6;UBERON:0004732,1.14e-08,6;UBERON:0002028,1.14e-08,6;UBERON:0007277,1.14e-08,6;UBERON:0003076,2.00e-07,12;UBERON:0003057,2.00e-07,12;UBERON:0001049,3.45e-07,52;UBERON:0005068,3.45e-07,52;UBERON:0006241,3.45e-07,52;UBERON:0007135,3.45e-07,52;UBERON:0001851,8.36e-07,1;UBERON:0005889,8.36e-07,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,1.68967186581868,0,0,0,0.837548997004143,0.56276261003168,1.5279824777681,0,0,0.186399445825301,1.28734528666413,7.85944225110569,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.69623150928681,2.28750301409313,0.125654352112864,0.695297280769106,3.58001640262463,1.66230435647648,4.38051410282946,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0.841159794256509,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,8.08760637486202,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p8@Tmod2 | |||
}} |
Revision as of 18:46, 14 September 2013
Short description: | p8@Tmod2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tmod2_5end |
Coexpression cluster: | MCL_coexpression_mm9:724 |
Association with transcript: | 0bp_to_ENSMUST00000164100, uc009qsj.1_5end |
EntrezGene: | Tmod2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.63e-15 | 3 |
insulating cell | 1.67e-11 | 2 |
myelin accumulating cell | 1.67e-11 | 2 |
Schwann cell | 1.67e-11 | 2 |
non-myelinating Schwann cell | 1.67e-11 | 2 |
myelinating Schwann cell;;Schwann cell | 1.67e-11 | 2 |
terminal Schwann cell | 1.67e-11 | 2 |
immature Schwann cell | 1.67e-11 | 2 |
Schwann cell precursor | 1.67e-11 | 2 |
barrier cell | 5.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.63e-15 | 3 |
reticular formation | 1.63e-15 | 3 |
medulla oblongata | 7.13e-12 | 2 |
brainstem | 7.13e-12 | 2 |
myelencephalon | 7.13e-12 | 2 |
future myelencephalon | 7.13e-12 | 2 |
nervous system | 7.84e-12 | 75 |
ectoderm-derived structure | 2.08e-10 | 95 |
ectoderm | 2.08e-10 | 95 |
presumptive ectoderm | 2.08e-10 | 95 |
regional part of nervous system | 3.16e-10 | 54 |
central nervous system | 1.10e-08 | 73 |
segmental subdivision of hindbrain | 1.14e-08 | 6 |
segmental subdivision of nervous system | 1.14e-08 | 6 |
hindbrain | 1.14e-08 | 6 |
presumptive hindbrain | 1.14e-08 | 6 |
posterior neural tube | 2.00e-07 | 12 |
chordal neural plate | 2.00e-07 | 12 |
neural tube | 3.45e-07 | 52 |
neural rod | 3.45e-07 | 52 |
future spinal cord | 3.45e-07 | 52 |
neural keel | 3.45e-07 | 52 |
cortex | 8.36e-07 | 1 |
zygote cortex | 8.36e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.