FFCP PHASE1:Mm9::chr9:42236236..42236246,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=272589|HGNC=|MCL_coexpression_id=2084|UniProt=|association_with_transcript=30bp_to_uc009pav.1_5end|description=CAGE_peak_9_at_Tbcel_5end|id=chr9:42236236..42236246,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,1.13e-15,6;CL:0002489,1.13e-15,6;CL:0000898,1.13e-15,6;CL:0000809,1.13e-15,6;CL:0000810,1.13e-15,6;CL:0000895,1.13e-15,6;CL:0000808,1.13e-15,6;CL:0000894,1.13e-15,6;CL:0000806,1.13e-15,6;CL:0000807,1.13e-15,6;CL:0000805,1.13e-15,6;CL:0002425,1.13e-15,6;CL:0002436,1.13e-15,6;CL:0002427,1.13e-15,6;CL:0002428,1.13e-15,6;CL:0002429,1.13e-15,6;CL:0002433,1.13e-15,6;CL:0002431,1.13e-15,6;CL:0002432,1.13e-15,6;CL:0000624,4.89e-12,8;CL:0000791,8.07e-11,9;CL:0000789,8.07e-11,9;CL:0002420,8.07e-11,9;CL:0002419,8.07e-11,9;CL:0000790,8.07e-11,9;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.26e-12!29;UBERON:0002370!3.71e-11!23;UBERON:0000974!3.71e-11!23;UBERON:0004807!3.71e-11!23;UBERON:0005058!3.71e-11!23;UBERON:0003351!3.71e-11!23;UBERON:0009113!3.71e-11!23;UBERON:0003295!3.71e-11!23;UBERON:0009722!3.71e-11!23;UBERON:0005562!3.71e-11!23;UBERON:0007690!3.71e-11!23;UBERON:0000065!6.39e-11!41;UBERON:0001004!1.67e-10!42;UBERON:0006562!1.69e-10!24;UBERON:0003408!1.69e-10!24;UBERON:0001557!1.69e-10!24;UBERON:0001042!1.69e-10!24;UBERON:0008814!1.69e-10!24;UBERON:0009145!1.69e-10!24;UBERON:0000072!7.85e-09!27;UBERON:0002193!8.97e-09!48;UBERON:0002390!1.19e-08!45;UBERON:0003061!1.19e-08!45;UBERON:0005057!5.50e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-09,23;UBERON:0000974,2.04e-09,23;UBERON:0004807,2.04e-09,23;UBERON:0005058,2.04e-09,23;UBERON:0003351,2.04e-09,23;UBERON:0009113,2.04e-09,23;UBERON:0003295,2.04e-09,23;UBERON:0009722,2.04e-09,23;UBERON:0005562,2.04e-09,23;UBERON:0007690,2.04e-09,23;UBERON:0006562,4.63e-09,24;UBERON:0003408,4.63e-09,24;UBERON:0001557,4.63e-09,24;UBERON:0001042,4.63e-09,24;UBERON:0008814,4.63e-09,24;UBERON:0009145,4.63e-09,24;UBERON:0000072,3.80e-08,27;UBERON:0004177,1.22e-07,29;UBERON:0005057,1.22e-07,29;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,3.0816131387617,2.44777126773193,0,0,0,0.315462165358238,0.274228867211478,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252946148497029,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.565105371014073,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.513554785824136,0.77952493786677,1.07416017400489,0.39736270956253,0.841368146639782,0.886137163047463,0.403865799792591,0.533447646584999,0.201652370273681,0.779663045918019,0.481059208201647,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0.578727661391115,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0|short_description=p9@Tbcel}} | ||
|EntrezGene=272589 | |||
|HGNC= | |||
|MCL_coexpression_id=2084 | |||
|UniProt= | |||
|association_with_transcript=30bp_to_uc009pav.1_5end | |||
|description=CAGE_peak_9_at_Tbcel_5end | |||
|id=chr9:42236236..42236246,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.13e-15,6;CL:0002489,1.13e-15,6;CL:0000898,1.13e-15,6;CL:0000809,1.13e-15,6;CL:0000810,1.13e-15,6;CL:0000895,1.13e-15,6;CL:0000808,1.13e-15,6;CL:0000894,1.13e-15,6;CL:0000806,1.13e-15,6;CL:0000807,1.13e-15,6;CL:0000805,1.13e-15,6;CL:0002425,1.13e-15,6;CL:0002436,1.13e-15,6;CL:0002427,1.13e-15,6;CL:0002428,1.13e-15,6;CL:0002429,1.13e-15,6;CL:0002433,1.13e-15,6;CL:0002431,1.13e-15,6;CL:0002432,1.13e-15,6;CL:0000624,4.89e-12,8;CL:0000791,8.07e-11,9;CL:0000789,8.07e-11,9;CL:0002420,8.07e-11,9;CL:0002419,8.07e-11,9;CL:0000790,8.07e-11,9;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.26e-12!29;UBERON:0002370!3.71e-11!23;UBERON:0000974!3.71e-11!23;UBERON:0004807!3.71e-11!23;UBERON:0005058!3.71e-11!23;UBERON:0003351!3.71e-11!23;UBERON:0009113!3.71e-11!23;UBERON:0003295!3.71e-11!23;UBERON:0009722!3.71e-11!23;UBERON:0005562!3.71e-11!23;UBERON:0007690!3.71e-11!23;UBERON:0000065!6.39e-11!41;UBERON:0001004!1.67e-10!42;UBERON:0006562!1.69e-10!24;UBERON:0003408!1.69e-10!24;UBERON:0001557!1.69e-10!24;UBERON:0001042!1.69e-10!24;UBERON:0008814!1.69e-10!24;UBERON:0009145!1.69e-10!24;UBERON:0000072!7.85e-09!27;UBERON:0002193!8.97e-09!48;UBERON:0002390!1.19e-08!45;UBERON:0003061!1.19e-08!45;UBERON:0005057!5.50e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-09,23;UBERON:0000974,2.04e-09,23;UBERON:0004807,2.04e-09,23;UBERON:0005058,2.04e-09,23;UBERON:0003351,2.04e-09,23;UBERON:0009113,2.04e-09,23;UBERON:0003295,2.04e-09,23;UBERON:0009722,2.04e-09,23;UBERON:0005562,2.04e-09,23;UBERON:0007690,2.04e-09,23;UBERON:0006562,4.63e-09,24;UBERON:0003408,4.63e-09,24;UBERON:0001557,4.63e-09,24;UBERON:0001042,4.63e-09,24;UBERON:0008814,4.63e-09,24;UBERON:0009145,4.63e-09,24;UBERON:0000072,3.80e-08,27;UBERON:0004177,1.22e-07,29;UBERON:0005057,1.22e-07,29;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,3.0816131387617,2.44777126773193,0,0,0,0.315462165358238,0.274228867211478,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252946148497029,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.565105371014073,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.513554785824136,0.77952493786677,1.07416017400489,0.39736270956253,0.841368146639782,0.886137163047463,0.403865799792591,0.533447646584999,0.201652370273681,0.779663045918019,0.481059208201647,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0.578727661391115,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p9@Tbcel | |||
}} |
Revision as of 17:51, 14 September 2013
Short description: | p9@Tbcel |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Tbcel_5end |
Coexpression cluster: | MCL_coexpression_mm9:2084 |
Association with transcript: | 30bp_to_uc009pav.1_5end |
EntrezGene: | Tbcel |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.04e-09 | 23 |
neck | 2.04e-09 | 23 |
respiratory system epithelium | 2.04e-09 | 23 |
hemolymphoid system gland | 2.04e-09 | 23 |
pharyngeal epithelium | 2.04e-09 | 23 |
thymic region | 2.04e-09 | 23 |
pharyngeal gland | 2.04e-09 | 23 |
entire pharyngeal arch endoderm | 2.04e-09 | 23 |
thymus primordium | 2.04e-09 | 23 |
early pharyngeal endoderm | 2.04e-09 | 23 |
pharynx | 4.63e-09 | 24 |
gland of gut | 4.63e-09 | 24 |
upper respiratory tract | 4.63e-09 | 24 |
chordate pharynx | 4.63e-09 | 24 |
pharyngeal arch system | 4.63e-09 | 24 |
pharyngeal region of foregut | 4.63e-09 | 24 |
segment of respiratory tract | 3.80e-08 | 27 |
hemopoietic organ | 1.22e-07 | 29 |
immune organ | 1.22e-07 | 29 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.