FFCP PHASE1:Mm9::chr8:63433665..63433674,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12725|HGNC=|MCL_coexpression_id=1|UniProt=Q8K4W8|association_with_transcript=-69bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end|description=CAGE_peak_5_at_Clcn3_5end|id=chr8:63433665..63433674,-|ontology_enrichment_celltype=CL:0000540!2.04e-07!33;CL:0000047!2.04e-07!33;CL:0000031!2.04e-07!33;CL:0000404!2.04e-07!33;CL:0000117!4.07e-07!23;CL:0000337!4.07e-07!23;CL:0000221!5.27e-07!44;CL:0000133!5.27e-07!44;CL:0002319!6.99e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,7.00e-08,3;CL:0000117,6.77e-07,23;CL:0000337,6.77e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.80e-19!102;UBERON:0000924!2.80e-19!102;UBERON:0006601!2.80e-19!102;UBERON:0002346!4.30e-18!71;UBERON:0003075!4.30e-18!71;UBERON:0007284!4.30e-18!71;UBERON:0001017!1.42e-17!73;UBERON:0005743!1.42e-17!73;UBERON:0000073!1.98e-17!75;UBERON:0001016!1.98e-17!75;UBERON:0000033!3.41e-16!63;UBERON:0001049!3.46e-14!52;UBERON:0005068!3.46e-14!52;UBERON:0006241!3.46e-14!52;UBERON:0007135!3.46e-14!52;UBERON:0000955!3.79e-13!50;UBERON:0006238!3.79e-13!50;UBERON:0002616!1.83e-12!49;UBERON:0002020!9.81e-12!34;UBERON:0003056!2.27e-11!49;UBERON:0002791!8.14e-09!29;UBERON:0003528!8.14e-09!29;UBERON:0001893!8.14e-09!29;UBERON:0003080!3.01e-08!40;UBERON:0003076!8.92e-08!12;UBERON:0003057!8.92e-08!12;UBERON:0007811!1.02e-07!86;UBERON:0002780!1.07e-07!39;UBERON:0001890!1.07e-07!39;UBERON:0006240!1.07e-07!39;UBERON:0000153!2.91e-07!94;UBERON:0000956!4.77e-07!21;UBERON:0001869!4.77e-07!21;UBERON:0000203!4.77e-07!21;UBERON:0002021!7.03e-07!10;UBERON:0000411!7.03e-07!10;UBERON:0001950!7.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-29,54;UBERON:0001049,4.46e-26,52;UBERON:0005068,4.46e-26,52;UBERON:0006241,4.46e-26,52;UBERON:0007135,4.46e-26,52;UBERON:0001017,4.95e-24,73;UBERON:0002346,6.25e-24,64;UBERON:0003075,6.25e-24,64;UBERON:0007284,6.25e-24,64;UBERON:0001016,3.18e-23,75;UBERON:0010371,3.06e-20,73;UBERON:0000955,3.42e-20,47;UBERON:0006238,3.42e-20,47;UBERON:0004121,5.28e-20,95;UBERON:0000924,5.28e-20,95;UBERON:0006601,5.28e-20,95;UBERON:0002616,1.49e-18,46;UBERON:0010314,1.47e-17,92;UBERON:0003076,3.69e-16,12;UBERON:0003057,3.69e-16,12;UBERON:0002020,7.93e-16,34;UBERON:0003080,3.78e-13,40;UBERON:0003056,4.74e-13,49;UBERON:0002021,3.04e-12,10;UBERON:0000411,3.04e-12,10;UBERON:0001950,3.04e-12,10;UBERON:0002780,7.97e-12,39;UBERON:0001890,7.97e-12,39;UBERON:0006240,7.97e-12,39;UBERON:0000025,9.57e-11,114;UBERON:0003528,1.31e-10,29;UBERON:0002791,1.31e-10,29;UBERON:0001893,1.31e-10,29;UBERON:0002240,3.78e-10,6;UBERON:0005174,3.78e-10,6;UBERON:0001137,3.78e-10,6;UBERON:0004111,1.19e-09,122;UBERON:0002619,8.93e-09,17;UBERON:0000956,9.21e-09,21;UBERON:0001869,9.21e-09,21;UBERON:0000203,9.21e-09,21;UBERON:0004684,7.00e-08,3;UBERON:0002275,7.00e-08,3;UBERON:0001948,7.87e-08,5;UBERON:0002315,7.87e-08,5;UBERON:0004733,1.26e-07,6;UBERON:0004732,1.26e-07,6;UBERON:0002028,1.26e-07,6;UBERON:0007277,1.26e-07,6;UBERON:0001896,9.70e-07,2;UBERON:0002298,9.70e-07,2;UBERON:0005290,9.70e-07,2;UBERON:0010096,9.70e-07,2|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.27687338085188,2.30409799884365,0.131886287730194,0,0.52091337055676,0.837548997004143,1.12552522006336,1.37518422999129,1.47314292736834,1.13897344639282,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0,0,1.86391761218122,1.75668478206928,2.72280718857492,0,0,0,0,1.49790639404823,2.74500361691176,0,2.60736480288415,1.53429274398198,3.32460871295296,2.10913641988085,0,0.248813941220186,0,1.05220927943237,0.390361328888111,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.768682321709099,0.0937017245597288,2.06962696591213,0.431135985865684,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0.697601834251224,0.268273401399619,0,0,0.492502392237286,0.486412857275134,1.31579988682799,1.09775057645525,0.939444931322602,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,3.5163505977661,0.163934945376675,1.51482556322624,0.315508219416257,0.390438744296638,0,0.716906393857656,0.445597348164788,0.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| ||
|EntrezGene=12725 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8K4W8 | |||
|association_with_transcript=-69bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end | |||
|description=CAGE_peak_5_at_Clcn3_5end | |||
|id=chr8:63433665..63433674,- | |||
|ontology_enrichment_celltype=CL:0000540!2.04e-07!33;CL:0000047!2.04e-07!33;CL:0000031!2.04e-07!33;CL:0000404!2.04e-07!33;CL:0000117!4.07e-07!23;CL:0000337!4.07e-07!23;CL:0000221!5.27e-07!44;CL:0000133!5.27e-07!44;CL:0002319!6.99e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.00e-08,3;CL:0000117,6.77e-07,23;CL:0000337,6.77e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.80e-19!102;UBERON:0000924!2.80e-19!102;UBERON:0006601!2.80e-19!102;UBERON:0002346!4.30e-18!71;UBERON:0003075!4.30e-18!71;UBERON:0007284!4.30e-18!71;UBERON:0001017!1.42e-17!73;UBERON:0005743!1.42e-17!73;UBERON:0000073!1.98e-17!75;UBERON:0001016!1.98e-17!75;UBERON:0000033!3.41e-16!63;UBERON:0001049!3.46e-14!52;UBERON:0005068!3.46e-14!52;UBERON:0006241!3.46e-14!52;UBERON:0007135!3.46e-14!52;UBERON:0000955!3.79e-13!50;UBERON:0006238!3.79e-13!50;UBERON:0002616!1.83e-12!49;UBERON:0002020!9.81e-12!34;UBERON:0003056!2.27e-11!49;UBERON:0002791!8.14e-09!29;UBERON:0003528!8.14e-09!29;UBERON:0001893!8.14e-09!29;UBERON:0003080!3.01e-08!40;UBERON:0003076!8.92e-08!12;UBERON:0003057!8.92e-08!12;UBERON:0007811!1.02e-07!86;UBERON:0002780!1.07e-07!39;UBERON:0001890!1.07e-07!39;UBERON:0006240!1.07e-07!39;UBERON:0000153!2.91e-07!94;UBERON:0000956!4.77e-07!21;UBERON:0001869!4.77e-07!21;UBERON:0000203!4.77e-07!21;UBERON:0002021!7.03e-07!10;UBERON:0000411!7.03e-07!10;UBERON:0001950!7.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-29,54;UBERON:0001049,4.46e-26,52;UBERON:0005068,4.46e-26,52;UBERON:0006241,4.46e-26,52;UBERON:0007135,4.46e-26,52;UBERON:0001017,4.95e-24,73;UBERON:0002346,6.25e-24,64;UBERON:0003075,6.25e-24,64;UBERON:0007284,6.25e-24,64;UBERON:0001016,3.18e-23,75;UBERON:0010371,3.06e-20,73;UBERON:0000955,3.42e-20,47;UBERON:0006238,3.42e-20,47;UBERON:0004121,5.28e-20,95;UBERON:0000924,5.28e-20,95;UBERON:0006601,5.28e-20,95;UBERON:0002616,1.49e-18,46;UBERON:0010314,1.47e-17,92;UBERON:0003076,3.69e-16,12;UBERON:0003057,3.69e-16,12;UBERON:0002020,7.93e-16,34;UBERON:0003080,3.78e-13,40;UBERON:0003056,4.74e-13,49;UBERON:0002021,3.04e-12,10;UBERON:0000411,3.04e-12,10;UBERON:0001950,3.04e-12,10;UBERON:0002780,7.97e-12,39;UBERON:0001890,7.97e-12,39;UBERON:0006240,7.97e-12,39;UBERON:0000025,9.57e-11,114;UBERON:0003528,1.31e-10,29;UBERON:0002791,1.31e-10,29;UBERON:0001893,1.31e-10,29;UBERON:0002240,3.78e-10,6;UBERON:0005174,3.78e-10,6;UBERON:0001137,3.78e-10,6;UBERON:0004111,1.19e-09,122;UBERON:0002619,8.93e-09,17;UBERON:0000956,9.21e-09,21;UBERON:0001869,9.21e-09,21;UBERON:0000203,9.21e-09,21;UBERON:0004684,7.00e-08,3;UBERON:0002275,7.00e-08,3;UBERON:0001948,7.87e-08,5;UBERON:0002315,7.87e-08,5;UBERON:0004733,1.26e-07,6;UBERON:0004732,1.26e-07,6;UBERON:0002028,1.26e-07,6;UBERON:0007277,1.26e-07,6;UBERON:0001896,9.70e-07,2;UBERON:0002298,9.70e-07,2;UBERON:0005290,9.70e-07,2;UBERON:0010096,9.70e-07,2 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.27687338085188,2.30409799884365,0.131886287730194,0,0.52091337055676,0.837548997004143,1.12552522006336,1.37518422999129,1.47314292736834,1.13897344639282,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0,0,1.86391761218122,1.75668478206928,2.72280718857492,0,0,0,0,1.49790639404823,2.74500361691176,0,2.60736480288415,1.53429274398198,3.32460871295296,2.10913641988085,0,0.248813941220186,0,1.05220927943237,0.390361328888111,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.768682321709099,0.0937017245597288,2.06962696591213,0.431135985865684,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0.697601834251224,0.268273401399619,0,0,0.492502392237286,0.486412857275134,1.31579988682799,1.09775057645525,0.939444931322602,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,3.5163505977661,0.163934945376675,1.51482556322624,0.315508219416257,0.390438744296638,0,0.716906393857656,0.445597348164788,0.283076530788832,0,0.584511715822624,0,2.24924921495265,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0.119372344003136,0,0,2.41052892613663,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,1.71853182343688,0,2.2661816921691,2.70009000092722,0.900642406448441,0.453142408984205,3.10656187051092,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.565879024158229,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0,0,0.197008964751127,0,0,0.385813221962283,0.499621155875892,0,0,0,0.661774257358546,0.927471342481686 | |||
|short_description=p5@Clcn3 | |||
}} |
Revision as of 15:50, 14 September 2013
Short description: | p5@Clcn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clcn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -69bp_to_NM_173876, uc009ltk.2, uc009lto.2_5end |
EntrezGene: | Clcn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.00e-08 | 3 |
CNS neuron (sensu Vertebrata) | 6.77e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.77e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.