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FFCP PHASE1:Mm9::chr8:124353420..124353471,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=234825|HGNC=|MCL_coexpression_id=101|UniProt=G3X961,Q921I2|association_with_transcript=0bp_to_ENSMUST00000045884,ENSMUST00000174709,NM_145605,uc009nsb.2_5end|description=CAGE_peak_1_at_Klhdc4_5end|id=chr8:124353420..124353471,-|ontology_enrichment_celltype=CL:0000988!2.16e-07!32;CL:0002032!2.16e-07!32;CL:0000037!2.16e-07!32;CL:0000566!2.16e-07!32;CL:0000837!2.16e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.71e-09!23;UBERON:0000974!2.71e-09!23;UBERON:0004807!2.71e-09!23;UBERON:0005058!2.71e-09!23;UBERON:0003351!2.71e-09!23;UBERON:0009113!2.71e-09!23;UBERON:0003295!2.71e-09!23;UBERON:0009722!2.71e-09!23;UBERON:0005562!2.71e-09!23;UBERON:0007690!2.71e-09!23;UBERON:0004177!4.28e-09!29;UBERON:0003408!6.05e-09!24;UBERON:0000072!1.56e-08!27;UBERON:0006562!2.30e-08!24;UBERON:0001557!2.30e-08!24;UBERON:0001042!2.30e-08!24;UBERON:0008814!2.30e-08!24;UBERON:0009145!2.30e-08!24;UBERON:0002193!1.97e-07!48;UBERON:0002390!4.33e-07!45;UBERON:0003061!4.33e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-09,23;UBERON:0000974,2.71e-09,23;UBERON:0004807,2.71e-09,23;UBERON:0005058,2.71e-09,23;UBERON:0003351,2.71e-09,23;UBERON:0009113,2.71e-09,23;UBERON:0003295,2.71e-09,23;UBERON:0009722,2.71e-09,23;UBERON:0005562,2.71e-09,23;UBERON:0007690,2.71e-09,23;UBERON:0004177,4.28e-09,29;UBERON:0005057,4.28e-09,29;UBERON:0003408,6.05e-09,24;UBERON:0000072,1.56e-08,27;UBERON:0006562,2.30e-08,24;UBERON:0001557,2.30e-08,24;UBERON:0001042,2.30e-08,24;UBERON:0008814,2.30e-08,24;UBERON:0009145,2.30e-08,24;UBERON:0000153,1.25e-07,43;UBERON:0002193,1.97e-07,48;UBERON:0002405,1.97e-07,48;UBERON:0007811,3.10e-07,36;UBERON:0002390,4.33e-07,45;UBERON:0003061,4.33e-07,45;UBERON:0000077,5.27e-07,35|phase1_expression=11.5307169915452,21.6364752736404,18.654968814971,6.0492842261366,11.520601788766,20.6491504451624,21.2587502941928,23.75869151325,64.0588685790084,70.45342242292,69.856931036006,82.8832731961545,22.2560948910567,22.7293046289393,14.9899392817048,18.2227740650843,13.2916756844348,22.3978137404349,19.3331351384092,26.3121584114779,14.4573593256819,19.9574811913779,13.5823890352246,15.9992422793407,17.4351053611049,16.0784949952206,13.7843838770904,16.8067561494993,8.7410772949932,18.6502296022349,23.9468951507729,34.9266870402797,36.2888224674896,15.8481681015439,25.7077941578634,25.6001353852078,22.4586291888606,22.1821764290561,36.7227611926186,30.3643771504803,31.1762688656438,32.7861832780054,30.1016418879315,13.2191658874356,12.8748702648783,12.4811791469943,7.82391344348039,16.5699118849139,12.3024262331304,14.387812531497,16.2384249085421,5.75010257459886,23.8251300601986,21.7608642603403,22.8543783416875,10.2903774414379,8.30946975822394,9.28209766099396,14.1621522601718,13.7537654610729,15.2119536841483,12.1984031544888,16.8966011261116,9.44894703145469,14.8329954385046,13.4991221839759,12.8828047522914,10.373894243682,14.2054768862614,18.9008313664367,12.6194976810829,11.9973413449598,14.1355866209033,17.5161842877384,17.3480302543008,16.5459381589804,3.30347642998166,11.1087984134113,10.5988507946808,16.4857859662742,20.0357939489277,18.7528813400434,9.77140496504833,14.069065250792,11.7654650788144,8.83885756421003,11.2473627831291,13.4207600994216,19.0072745266292,7.3304413303582,15.3628179011889,13.7667820317022,12.2394840067395,13.4925797909454,22.0923981932207,15.6809410484067,11.7973312910672,14.1457167739788,17.6654483129951,17.666978725517,9.43650912503759,12.8326477414318,15.2883143823987,42.6640021891999,18.8347205679756,19.5087096415826,16.6823066854878,15.4148237620731,24.3401610628341,10.5393918736026,19.0833859442749,10.6562917409249,12.6838523490832,10.7013074792362,11.7588707135705,13.8233250462643,14.8316980640624,12.4355446951124,10.6153266233985,14.8825501951616,12.5879665522424,13.091631834651,18.6391761218122,15.8101630386235,18.850203613211,18.3929079750186,32.2302684920926,28.1954283566902,28.5908010914396,16.4769703345305,17.3850229071078,17.591609295801,14.6012428961512,16.1100738118108,14.7529511637288,13.4660248346239,14.6648683944455,15.1776504144313,10.6143558542143,10.5220927943237,24.3325228340256,24.8294272788151,21.9675798362526,18.6873974116287,16.6689422920753,20.1138540847214,19.021450085625,17.5918292102531,31.472926968195,26.0966390631591,19.5305747821983,21.2619860454748,20.019401944243,11.8405736617537,11.7295817752528,23.2870092177637,35.1106593656617,39.6315776956661,24.7222244474166,20.0911999359437,16.6513502586578,15.4853372856473,15.8618972842091,14.7573173810553,14.3468414985262,11.8592311822708,15.8281306825775,12.2603609485528,15.7977455916941,16.4167464079095,10.9442892886905,13.4503988431306,17.344459107993,11.6759584321523,13.0379768109759,17.4937841044784,11.2342386214491,22.4782981664013,23.674995809411,22.759193842323,22.2940708087221,18.756567789970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|EntrezGene=234825
|HGNC=
|MCL_coexpression_id=101
|UniProt=G3X961,Q921I2
|association_with_transcript=0bp_to_ENSMUST00000045884,ENSMUST00000174709,NM_145605,uc009nsb.2_5end
|description=CAGE_peak_1_at_Klhdc4_5end
|id=chr8:124353420..124353471,-
|ontology_enrichment_celltype=CL:0000988!2.16e-07!32;CL:0002032!2.16e-07!32;CL:0000037!2.16e-07!32;CL:0000566!2.16e-07!32;CL:0000837!2.16e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!2.71e-09!23;UBERON:0000974!2.71e-09!23;UBERON:0004807!2.71e-09!23;UBERON:0005058!2.71e-09!23;UBERON:0003351!2.71e-09!23;UBERON:0009113!2.71e-09!23;UBERON:0003295!2.71e-09!23;UBERON:0009722!2.71e-09!23;UBERON:0005562!2.71e-09!23;UBERON:0007690!2.71e-09!23;UBERON:0004177!4.28e-09!29;UBERON:0003408!6.05e-09!24;UBERON:0000072!1.56e-08!27;UBERON:0006562!2.30e-08!24;UBERON:0001557!2.30e-08!24;UBERON:0001042!2.30e-08!24;UBERON:0008814!2.30e-08!24;UBERON:0009145!2.30e-08!24;UBERON:0002193!1.97e-07!48;UBERON:0002390!4.33e-07!45;UBERON:0003061!4.33e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-09,23;UBERON:0000974,2.71e-09,23;UBERON:0004807,2.71e-09,23;UBERON:0005058,2.71e-09,23;UBERON:0003351,2.71e-09,23;UBERON:0009113,2.71e-09,23;UBERON:0003295,2.71e-09,23;UBERON:0009722,2.71e-09,23;UBERON:0005562,2.71e-09,23;UBERON:0007690,2.71e-09,23;UBERON:0004177,4.28e-09,29;UBERON:0005057,4.28e-09,29;UBERON:0003408,6.05e-09,24;UBERON:0000072,1.56e-08,27;UBERON:0006562,2.30e-08,24;UBERON:0001557,2.30e-08,24;UBERON:0001042,2.30e-08,24;UBERON:0008814,2.30e-08,24;UBERON:0009145,2.30e-08,24;UBERON:0000153,1.25e-07,43;UBERON:0002193,1.97e-07,48;UBERON:0002405,1.97e-07,48;UBERON:0007811,3.10e-07,36;UBERON:0002390,4.33e-07,45;UBERON:0003061,4.33e-07,45;UBERON:0000077,5.27e-07,35
|phase1_expression=11.5307169915452,21.6364752736404,18.654968814971,6.0492842261366,11.520601788766,20.6491504451624,21.2587502941928,23.75869151325,64.0588685790084,70.45342242292,69.856931036006,82.8832731961545,22.2560948910567,22.7293046289393,14.9899392817048,18.2227740650843,13.2916756844348,22.3978137404349,19.3331351384092,26.3121584114779,14.4573593256819,19.9574811913779,13.5823890352246,15.9992422793407,17.4351053611049,16.0784949952206,13.7843838770904,16.8067561494993,8.7410772949932,18.6502296022349,23.9468951507729,34.9266870402797,36.2888224674896,15.8481681015439,25.7077941578634,25.6001353852078,22.4586291888606,22.1821764290561,36.7227611926186,30.3643771504803,31.1762688656438,32.7861832780054,30.1016418879315,13.2191658874356,12.8748702648783,12.4811791469943,7.82391344348039,16.5699118849139,12.3024262331304,14.387812531497,16.2384249085421,5.75010257459886,23.8251300601986,21.7608642603403,22.8543783416875,10.2903774414379,8.30946975822394,9.28209766099396,14.1621522601718,13.7537654610729,15.2119536841483,12.1984031544888,16.8966011261116,9.44894703145469,14.8329954385046,13.4991221839759,12.8828047522914,10.373894243682,14.2054768862614,18.9008313664367,12.6194976810829,11.9973413449598,14.1355866209033,17.5161842877384,17.3480302543008,16.5459381589804,3.30347642998166,11.1087984134113,10.5988507946808,16.4857859662742,20.0357939489277,18.7528813400434,9.77140496504833,14.069065250792,11.7654650788144,8.83885756421003,11.2473627831291,13.4207600994216,19.0072745266292,7.3304413303582,15.3628179011889,13.7667820317022,12.2394840067395,13.4925797909454,22.0923981932207,15.6809410484067,11.7973312910672,14.1457167739788,17.6654483129951,17.666978725517,9.43650912503759,12.8326477414318,15.2883143823987,42.6640021891999,18.8347205679756,19.5087096415826,16.6823066854878,15.4148237620731,24.3401610628341,10.5393918736026,19.0833859442749,10.6562917409249,12.6838523490832,10.7013074792362,11.7588707135705,13.8233250462643,14.8316980640624,12.4355446951124,10.6153266233985,14.8825501951616,12.5879665522424,13.091631834651,18.6391761218122,15.8101630386235,18.850203613211,18.3929079750186,32.2302684920926,28.1954283566902,28.5908010914396,16.4769703345305,17.3850229071078,17.591609295801,14.6012428961512,16.1100738118108,14.7529511637288,13.4660248346239,14.6648683944455,15.1776504144313,10.6143558542143,10.5220927943237,24.3325228340256,24.8294272788151,21.9675798362526,18.6873974116287,16.6689422920753,20.1138540847214,19.021450085625,17.5918292102531,31.472926968195,26.0966390631591,19.5305747821983,21.2619860454748,20.019401944243,11.8405736617537,11.7295817752528,23.2870092177637,35.1106593656617,39.6315776956661,24.7222244474166,20.0911999359437,16.6513502586578,15.4853372856473,15.8618972842091,14.7573173810553,14.3468414985262,11.8592311822708,15.8281306825775,12.2603609485528,15.7977455916941,16.4167464079095,10.9442892886905,13.4503988431306,17.344459107993,11.6759584321523,13.0379768109759,17.4937841044784,11.2342386214491,22.4782981664013,23.674995809411,22.759193842323,22.2940708087221,18.7565677899709,18.4573776391242,15.0278244628922,16.1339880925134,13.9994111515409,10.8074139784116,9.94782360205754,12.0877734013854,21.5716658077013,13.6166971421057,11.1519113022446,23.329151817229,23.9921876480431,14.6520056375005,19.3468761453049,19.0073437424273,15.4298803758701,14.7973496870762,12.6944727262458,15.071877872772,16.4118228015995,17.1942523710546,24.1925403288336,23.3905204184712,26.084005036643,19.0688514105193,18.3294641411837,12.731292589071,14.6725030099913,10.3766545136023,15.1008777253445,11.5014565221884,10.7920874823866,13.1055822708115,18.6908369680863,23.5010611713705,13.5084185981743,14.2259956428286,26.5287976478679,21.1854469374634,17.8232340063948,19.0099101113687,15.5780819420889,11.1880511216426,13.2690880543303,15.2906089783005,10.85176979279,14.0320196418589,12.4536119183961,16.577758259126,11.5719246865209,9.04747703635634,16.86107619838,17.7035138286853,12.9690270763224,11.559642479121,14.417037450841,6.06559297893699,7.06918596172244,14.1978698737316,7.80877488593277,10.5557464889071,12.9043150894378,9.35754431146055,12.1722908239198,10.5250782435473,13.151513606009,9.48690667071656,15.4234231882467,13.3423680095772,16.3820355373875,15.1484872198826,13.3625799607754,13.2745138339963,25.2491861601181,21.7672961014621,20.7465587731488,23.9194533233426,15.9866276930842,13.6966995379157,9.45187696641514,19.250858432775,24.6508671189936,15.8127912862498,19.5957532171555,11.234506989875,19.9867814374754,20.9561067728062,17.1469628025274,18.6207245324387,16.9450376721967,11.0247843803421,14.0053876592716,19.7124234773517,14.4045808187398,13.8932890774626,16.3237390412065,12.4327608555847,15.078231232039,13.966564248367,18.2196398717018,14.8655226681224,11.1255181206306,16.5744754373917,16.3045625690946,22.4085378117351,13.9392658183471,17.3601669205702,24.4792645330979,21.7572390392135,22.9520381810799,21.4209959396857,5.72802370809068,22.30168754747,17.2821547057821,18.3609079397062,12.9634743528971,16.3771922809633,15.1048067950999,13.3898598275044,14.1348208671376,12.9614973291793,15.5334828271731,23.675103424736,25.4178128274764,22.1714377212511,18.8617652693726,15.7574984642832,14.8681390431885,16.6647278876971,17.5775919539333,20.0281347853108,16.9108884578204,19.298010419277,22.7528006852288,21.2861476054672,23.7262311050751,27.8030561172481,26.4959509587873,25.2325320572206,24.6400671515936,26.1410463099002,25.2416124870369,22.25238754326,21.9801083598312,24.0720965427188,21.2628170025128,17.7652891315985,11.789979947991,23.7524970110249,61.2745640642719,24.0075001400632,8.113962949352,13.8885031833875,17.7657075539247,15.2201549146137,11.5361583928134,14.6835479080437,16.1113832777512,14.3223878359849,13.0608418581203,14.3867329151835,20.3956352295219,14.1754725048679,16.2115633160719,12.6879874515577,17.0860902878101,32.7968018365998,15.9609949360412,21.683167930775,17.7467903459855,16.7690530102386,17.2812897943013,15.7795176739147,17.7190149225449,15.4041220604071,13.3929522234813,14.1948407938534,15.0901073108861,15.8254147624101,16.1343384060271,15.2778347421931,13.3362233559261,16.1079213063349,16.7831021803423,10.3021475200827,15.0142898537085,18.172070376427,16.3277741666591,12.3986818772607,17.8776092457764,15.7162665293602,13.3691080468849,14.0854539112035,12.8904158604543,16.5681018891951,16.8342681497322,15.5411873742668,14.5786633915834,14.3230865109391,15.4936841185966,13.8892759906422,19.7350356570977,14.9716229405061,10.09893954027,11.4772999241306,12.5737108898124,15.3032771509478
|short_description=p1@Klhdc4
}}

Revision as of 15:00, 14 September 2013

Short description:p1@Klhdc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Klhdc4_5end
Coexpression cluster:MCL_coexpression_mm9:101
Association with transcript: 0bp_to_ENSMUST00000045884, ENSMUST00000174709, NM_145605, uc009nsb.2_5end
EntrezGene:Klhdc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Klhdc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.26
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E764.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F270.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E669.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F182.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.22
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A222.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.44
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I216.81
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C118.65
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.60
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H136.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G931.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.57
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.83
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.76
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.85
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C314.16
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.20
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.90
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.49
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D919.01
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.41
accessory axillary lymph node, adult.CNhs10475.1063-29H924.34
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C519.08
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I313.82
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H112.44
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F514.88
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I218.85
colon, adult.CNhs10468.36-18H718.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C732.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.59
corpora quadrigemina, adult.CNhs10501.16-22A416.48
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F117.59
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B213.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.18
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C624.33
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C921.97
eyeball, embryo E17.CNhs11023.1261-18D418.69
eyeball, neonate N00.CNhs11207.633-15C616.67
eyeball, neonate N01.CNhs11140.1532-43E720.11
eyeball, neonate N02.CNhs11205.1551-44G819.02
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E231.47
forelimb, embryo E12.CNhs10600.359-14H226.10
forelimb, embryo E13.CNhs10589.384-1E219.53
forelimb, embryo E14.CNhs10577.413-26A821.26
forelimb, embryo E15.CNhs11007.437-20E720.02
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I623.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D239.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.72
heart, embryo E11.CNhs10586.331-24E920.09
heart, embryo E12.CNhs11015.353-12F516.65
heart, embryo E13.CNhs11013.376-3I915.49
heart, embryo E14.CNhs10597.403-26D415.86
heart, embryo E15.CNhs11017.431-16C814.76
heart, embryo E16.CNhs11021.457-17C614.35
heart, embryo E17.CNhs11025.479-18E511.86
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E312.26
heart, neonate N03.CNhs11221.1349-25I215.80
heart, neonate N10.CNhs11118.749-24G116.42
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I613.45
heart, neonate N25.CNhs11196.1351-25D317.34
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E813.04
hippocampus, neonate N00.CNhs11228.627-43G117.49
intestinal mucosa, adult.CNhs10506.860-29I311.23
intestine, adult.CNhs10496.178-9A322.48
intestine, embryo E12.CNhs11019.1251-16I523.67
intestine, embryo E13.CNhs11010.381-16D522.76
intestine, embryo E15.CNhs10602.976-16D822.29
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D318.46
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E914.00
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A512.09
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I923.33
kidney, embryo E15.CNhs10997.434-16F823.99
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G715.43
kidney, neonate N10.CNhs11206.758-6D514.80
kidney, neonate N20.CNhs11113.832-19I112.69
kidney, neonate N25.CNhs11122.1353-25F315.07
kidney, neonate N30.CNhs11203.1385-42H116.41
liver, adult pregnant day01.CNhs10466.508-5B217.19
liver, embryo E12.CNhs10601.355-15F824.19
liver, embryo E13.CNhs10524.378-3H623.39
liver, embryo E14.CNhs10594.409-16E126.08
liver, embryo E15.CNhs10520.433-16D719.07
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A312.73
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B913.11
liver, neonate N20.CNhs11220.823-25A318.69
liver, neonate N25.CNhs11198.1368-26H123.50
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G226.53
lung, embryo E14.CNhs10604.404-26F821.19
lung, embryo E15.CNhs11020.432-17C517.82
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E515.29
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E614.03
lung, neonate N20.CNhs11109.822-18A412.45
lung, neonate N25.CNhs11119.1359-25C716.58
lung, neonate N30.CNhs11133.1394-42H211.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H212.97
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A314.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G613.36
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F221.77
pancreas, embryo E16.CNhs11003.460-26E520.75
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B624.65
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E619.99
pituitary gland, embryo E13.CNhs11009.370-44C720.96
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G314.40
prostate, adult.CNhs10470.859-1F813.89
skin, adult.CNhs10492.30-1C316.32
skin, neonate N00.CNhs11124.650-25G412.43
skin, neonate N03.CNhs11215.662-22H315.08
skin, neonate N06.CNhs11097.693-20I513.97
skin, neonate N10.CNhs11108.762-6C418.22
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G216.57
spleen, embryo E16.CNhs11035.461-43C116.30
spleen, embryo E18.CNhs11011.1271-21F222.41
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H117.36
spleen, neonate N25.CNhs11099.1354-25G324.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.42
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E322.30
stomach, embryo E15.CNhs10603.1252-16G817.28
stomach, embryo E16.CNhs11022.459-17D418.36
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A913.39
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I112.96
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F525.42
testis, embryo E15.CNhs11034.443-27C522.17
testis, embryo E16.CNhs11033.470-26G518.86
testis, embryo E17.CNhs11029.486-18I515.76
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B716.66
testis, neonate N07.CNhs11222.726-26I417.58
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H316.91
testis, neonate N30.CNhs11130.1391-42E219.30
thymus, adult.CNhs10471.38-12B522.75
thymus, embryo E14.CNhs11041.402-44I421.29
thymus, embryo E15.CNhs11005.430-45I223.73
thymus, embryo E16.CNhs11002.456-26C527.80
thymus, embryo E17.CNhs10581.478-18C126.50
thymus, embryo E18.CNhs10595.1273-19G425.23
thymus, neonate N02.CNhs11181.1541-43F824.64
thymus, neonate N03.CNhs11137.2104-43C726.14
thymus, neonate N06.CNhs11197.681-26C425.24
thymus, neonate N07.CNhs11211.713-19D322.25
thymus, neonate N10.CNhs11194.748-24E421.98
thymus, neonate N20.CNhs11186.820-7A224.07
thymus, neonate N25.CNhs11125.1362-25G721.26
thymus, neonate N30.CNhs11132.1393-42G217.77
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.75
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F761.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.01
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E517.77
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I832.80
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H221.68
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B116.77
whole body, embryo E16.CNhs10514.453-14F217.28
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.49
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I519.74
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B415.30





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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