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FFCP PHASE1:Mm9::chr7:87331795..87331818,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20352|HGNC=|MCL_coexpression_id=12|UniProt=Q62179,F2Z3W4|association_with_transcript=68bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end|description=CAGE_peak_4_at_Sema4b_5end|id=chr7:87331795..87331818,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,4.23e-08,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9;CL:0000239,1.88e-07,6;CL:0000677,1.88e-07,6;CL:0000584,1.88e-07,6;CL:0000066,2.24e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.89e-09!15;UBERON:0001242!3.33e-08!13;UBERON:0000060!3.33e-08!13;UBERON:0001262!3.33e-08!13;UBERON:0004786!3.33e-08!13;UBERON:0000160!3.69e-08!43;UBERON:0005409!2.24e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-18,31;UBERON:0005409,2.40e-16,47;UBERON:0000344,5.63e-14,15;UBERON:0001242,5.11e-12,13;UBERON:0001262,5.11e-12,13;UBERON:0004786,5.11e-12,13;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0004923,6.81e-08,24;UBERON:0000485,1.29e-07,11;UBERON:0007023,3.98e-07,51|phase1_expression=0.80074423552397,32.4547129104606,36.8549383905524,19.3577095236371,27.5492651470491,3.3575854382378,4.43864017131499,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.78590909317247,0,0,9.11956809922418,12.6175104586944,19.5238867799107,12.4920978886132,9.26526300549323,16.1519906537918,10.0812051903972,9.3126814475228,0,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.65407546914134,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0.763991238884051,1.76777151284201,1.28134512719193,0.559198337475902,0.302904773332736,1.28471652181535,2.6087803983151,2.58127163094416,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0,0,2.53518155598025,0,0,0,2.16491041011214,1.26679932737549,1.01104889002957,2.2836775943812,0.517875767294343,2.3750742250372,1.04091196059682,1.52232739156071,3.45923245884088,2.56228488939458,1.76383060703557,4.14699751387929,0.988779870937496,8.09756398751505,0.884610551949874,0.323533699894818,0.441683036920787,0,11.1835056730873,0,0.83778682725382,12.7728527604296,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,1.11966273549084,0.505445516867349,2.94618598241064,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.817357396570186,0.658239399653922,0.164167464079095,0.891756905004413,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0,47.5803047496669,12.9580777665137,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,1.33157938278791,10.9141684155238,3.45867804920423,1.50801125280162,2.98434708061726,6.43381487493096,7.19055526923377,9.07779809473716,7.96565093017469,0,0,1.1270773567308,0,1.35766741017338,0.841629838683823,1.07502113111237,2.36176236767363,1.41298855057237,4.19550357334122,0.889357881261447,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,2.23284568601102,0.936113019343682,0.757736633841335,0.717589654087649,0.964887042726734,0.184753190166605,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.723245292907558,0,0,1.47529281905711,1.65562047782839,0.481651769963376,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,0.321321316421807,1.41940085208269,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,0.188605079755898,0.885905678642318,0.614870295887855,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,3.40439605753788,0.18006109403131,0.517434735131018,0.214337035031592,1.24138163549592,0.535106452806212,0.493647061806363,1.522324745573,0,2.33015277950202,0.661585194164886,2.63818004706368,0.322928853391811,0.663442174209714,1.19372344003136,1.14898629821543,7.57850175237612,0.18542530201051,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0,9.54670618015114,0.158167996790568,0,0.432021363287205,1.67270636811575,3.05707589244649,2.15782954215713,2.0663363931334,2.6175594198403,7.90651337079936,12.4267862617385,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,0.675824501963113,1.17357238645754,1.17183946359555,1.36317147753424,0.724752362478018,0.864090018773596,0.632022241256357,0.810900861160657,0.924398614483445,0.389762468933385,0.358053391334963,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.192423683280659,0.233753804363138,2.0405734525369,1.33191572024439,0.179427713218951,0.839423081820392,3.09103350451505,2.62755465631655,0.915758121336325,5.35920947697665,2.50786052017682,1.6942555278512,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.655490552289177,1.34452820050225,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.294397840268795,0,1.24233064311536,1.43061713968393,0.872078499793971,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,1.68342681497322,1.06771516311757,1.18205378850676,1.63692417267876,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0.956441660344217,0.661774257358546,1.15933917810211|short_description=p4@Sema4b}}
|EntrezGene=20352
|HGNC=
|MCL_coexpression_id=12
|UniProt=Q62179,F2Z3W4
|association_with_transcript=68bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end
|description=CAGE_peak_4_at_Sema4b_5end
|id=chr7:87331795..87331818,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000075,4.23e-08,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9;CL:0000239,1.88e-07,6;CL:0000677,1.88e-07,6;CL:0000584,1.88e-07,6;CL:0000066,2.24e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.89e-09!15;UBERON:0001242!3.33e-08!13;UBERON:0000060!3.33e-08!13;UBERON:0001262!3.33e-08!13;UBERON:0004786!3.33e-08!13;UBERON:0000160!3.69e-08!43;UBERON:0005409!2.24e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-18,31;UBERON:0005409,2.40e-16,47;UBERON:0000344,5.63e-14,15;UBERON:0001242,5.11e-12,13;UBERON:0001262,5.11e-12,13;UBERON:0004786,5.11e-12,13;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0004923,6.81e-08,24;UBERON:0000485,1.29e-07,11;UBERON:0007023,3.98e-07,51
|phase1_expression=0.80074423552397,32.4547129104606,36.8549383905524,19.3577095236371,27.5492651470491,3.3575854382378,4.43864017131499,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.78590909317247,0,0,9.11956809922418,12.6175104586944,19.5238867799107,12.4920978886132,9.26526300549323,16.1519906537918,10.0812051903972,9.3126814475228,0,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.65407546914134,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0.763991238884051,1.76777151284201,1.28134512719193,0.559198337475902,0.302904773332736,1.28471652181535,2.6087803983151,2.58127163094416,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0,0,2.53518155598025,0,0,0,2.16491041011214,1.26679932737549,1.01104889002957,2.2836775943812,0.517875767294343,2.3750742250372,1.04091196059682,1.52232739156071,3.45923245884088,2.56228488939458,1.76383060703557,4.14699751387929,0.988779870937496,8.09756398751505,0.884610551949874,0.323533699894818,0.441683036920787,0,11.1835056730873,0,0.83778682725382,12.7728527604296,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,1.11966273549084,0.505445516867349,2.94618598241064,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.817357396570186,0.658239399653922,0.164167464079095,0.891756905004413,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0,47.5803047496669,12.9580777665137,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,1.33157938278791,10.9141684155238,3.45867804920423,1.50801125280162,2.98434708061726,6.43381487493096,7.19055526923377,9.07779809473716,7.96565093017469,0,0,1.1270773567308,0,1.35766741017338,0.841629838683823,1.07502113111237,2.36176236767363,1.41298855057237,4.19550357334122,0.889357881261447,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,2.23284568601102,0.936113019343682,0.757736633841335,0.717589654087649,0.964887042726734,0.184753190166605,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.723245292907558,0,0,1.47529281905711,1.65562047782839,0.481651769963376,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,0.321321316421807,1.41940085208269,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,0.188605079755898,0.885905678642318,0.614870295887855,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,3.40439605753788,0.18006109403131,0.517434735131018,0.214337035031592,1.24138163549592,0.535106452806212,0.493647061806363,1.522324745573,0,2.33015277950202,0.661585194164886,2.63818004706368,0.322928853391811,0.663442174209714,1.19372344003136,1.14898629821543,7.57850175237612,0.18542530201051,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0,9.54670618015114,0.158167996790568,0,0.432021363287205,1.67270636811575,3.05707589244649,2.15782954215713,2.0663363931334,2.6175594198403,7.90651337079936,12.4267862617385,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,0.675824501963113,1.17357238645754,1.17183946359555,1.36317147753424,0.724752362478018,0.864090018773596,0.632022241256357,0.810900861160657,0.924398614483445,0.389762468933385,0.358053391334963,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.192423683280659,0.233753804363138,2.0405734525369,1.33191572024439,0.179427713218951,0.839423081820392,3.09103350451505,2.62755465631655,0.915758121336325,5.35920947697665,2.50786052017682,1.6942555278512,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.655490552289177,1.34452820050225,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.294397840268795,0,1.24233064311536,1.43061713968393,0.872078499793971,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,1.68342681497322,1.06771516311757,1.18205378850676,1.63692417267876,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0.956441660344217,0.661774257358546,1.15933917810211
|short_description=p4@Sema4b
}}

Revision as of 14:18, 14 September 2013

Short description:p4@Sema4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sema4b_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 68bp_to_ENSMUST00000032754, ENSMUST00000107383, NM_013659, uc009hzo.1, uc009hzp.1_5end
EntrezGene:Sema4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sema4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I532.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I427.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I112.49
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B916.15
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I347.58
intestine, adult.CNhs10496.178-9A312.96
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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