FFCP PHASE1:Mm9::chr7:71647076..71647091,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11784|HGNC=|MCL_coexpression_id=13|UniProt=E9Q0G5|association_with_transcript=52bp_to_ENSMUST00000137732_5end|description=CAGE_peak_6_at_Apba2_5end|id=chr7:71647076..71647091,+|ontology_enrichment_celltype=CL:0000540!7.13e-20!33;CL:0000047!7.13e-20!33;CL:0000031!7.13e-20!33;CL:0000404!7.13e-20!33;CL:0000117!8.80e-20!23;CL:0000337!8.80e-20!23;CL:0002319!5.82e-18!43;CL:0000221!3.10e-17!44;CL:0000133!3.10e-17!44;CL:0000393!6.68e-15!39;CL:0000211!6.68e-15!39;CL:0000055!1.55e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-35,23;CL:0000337,1.59e-35,23;CL:0000540,1.01e-22,33;CL:0000047,1.01e-22,33;CL:0000031,1.01e-22,33;CL:0000404,1.01e-22,33;CL:0002319,1.23e-20,43;CL:0000221,5.31e-20,44;CL:0000133,5.31e-20,44;CL:0000393,3.24e-18,39;CL:0000211,3.24e-18,39;CL:0002321,5.69e-10,70;CL:0002609,6.77e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.87e-39!73;UBERON:0005743!9.87e-39!73;UBERON:0000073!5.42e-38!75;UBERON:0001016!5.42e-38!75;UBERON:0004121!6.80e-34!102;UBERON:0000924!6.80e-34!102;UBERON:0006601!6.80e-34!102;UBERON:0002346!9.45e-31!71;UBERON:0003075!9.45e-31!71;UBERON:0007284!9.45e-31!71;UBERON:0000033!3.87e-28!63;UBERON:0001049!7.32e-28!52;UBERON:0005068!7.32e-28!52;UBERON:0006241!7.32e-28!52;UBERON:0007135!7.32e-28!52;UBERON:0000955!8.57e-26!50;UBERON:0006238!8.57e-26!50;UBERON:0002616!4.77e-25!49;UBERON:0003056!3.33e-24!49;UBERON:0002020!1.43e-23!34;UBERON:0003080!6.44e-21!40;UBERON:0002780!4.96e-20!39;UBERON:0001890!4.96e-20!39;UBERON:0006240!4.96e-20!39;UBERON:0002791!3.63e-19!29;UBERON:0003528!3.63e-19!29;UBERON:0001893!3.63e-19!29;UBERON:0007811!3.83e-17!86;UBERON:0000153!1.59e-16!94;UBERON:0000956!9.51e-13!21;UBERON:0001869!9.51e-13!21;UBERON:0000203!9.51e-13!21;UBERON:0002619!2.22e-10!17;UBERON:0002021!6.61e-09!10;UBERON:0000411!6.61e-09!10;UBERON:0001950!6.61e-09!10;UBERON:0002420!9.80e-08!8;UBERON:0007245!9.80e-08!8;UBERON:0010009!9.80e-08!8;UBERON:0010011!9.80e-08!8;UBERON:0000454!9.80e-08!8;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-47,73;UBERON:0001016,1.35e-45,75;UBERON:0000073,5.92e-45,54;UBERON:0001049,6.98e-42,52;UBERON:0005068,6.98e-42,52;UBERON:0006241,6.98e-42,52;UBERON:0007135,6.98e-42,52;UBERON:0002020,2.54e-41,34;UBERON:0004121,1.60e-38,95;UBERON:0000924,1.60e-38,95;UBERON:0006601,1.60e-38,95;UBERON:0002346,8.69e-38,64;UBERON:0003075,8.69e-38,64;UBERON:0007284,8.69e-38,64;UBERON:0000955,1.19e-33,47;UBERON:0006238,1.19e-33,47;UBERON:0003528,3.97e-33,29;UBERON:0002791,3.97e-33,29;UBERON:0001893,3.97e-33,29;UBERON:0002616,2.30e-32,46;UBERON:0010371,8.71e-32,73;UBERON:0003080,1.75e-28,40;UBERON:0003056,4.74e-27,49;UBERON:0002780,5.85e-27,39;UBERON:0001890,5.85e-27,39;UBERON:0006240,5.85e-27,39;UBERON:0010314,5.57e-23,92;UBERON:0000956,3.13e-21,21;UBERON:0001869,3.13e-21,21;UBERON:0000203,3.13e-21,21;UBERON:0002619,7.64e-17,17;UBERON:0000025,1.64e-13,114;UBERON:0003076,2.13e-13,12;UBERON:0003057,2.13e-13,12;UBERON:0002420,4.74e-13,8;UBERON:0007245,4.74e-13,8;UBERON:0010009,4.74e-13,8;UBERON:0010011,4.74e-13,8;UBERON:0000454,4.74e-13,8;UBERON:0002021,8.09e-13,10;UBERON:0000411,8.09e-13,10;UBERON:0001950,8.09e-13,10;UBERON:0004111,5.70e-12,122;UBERON:0002240,6.97e-11,6;UBERON:0005174,6.97e-11,6;UBERON:0001137,6.97e-11,6;UBERON:0011216,2.46e-10,194;UBERON:0001948,3.31e-09,5;UBERON:0002315,3.31e-09,5;UBERON:0000369,6.66e-09,5;UBERON:0002435,6.66e-09,5;UBERON:0000204,6.66e-09,5;UBERON:0010082,6.66e-09,5;UBERON:0002950,2.59e-07,4;UBERON:0001891,2.59e-07,4;UBERON:0009616,2.59e-07,4;UBERON:0010286,2.59e-07,4;UBERON:0000483,3.43e-07,174;UBERON:0000119,5.38e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,6.67644320836673,3.1739458756322,6.33831403506179,0,0,0,0,0,1.79760066311043,2.30530983192933,1.65903379693564,1.62007125998029,1.68259969081106,3.42781181284564,3.75476519617743,2.44981598429908,2.97120960156533,4.5960939330501,3.30347642998166,4.46905683298157,2.91852413186863,5.53922408466814,5.94669683415663,2.08365348222704,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,4.55589378557129,3.54158947068071,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,3.59497534571574,1.83000241127451,3.76963056338593,2.08589184230732,3.58001640262463,2.70124457927428,2.92034273521964,0,0,0,0,0.260240885925407,0.459804208866946,0.720248519221397,0.452114453507145,2.04109497453984,1.40925092313335,2.71735001223214,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,2.26390147234426,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.88991061978026,3.39913891117389,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.584511715822624,0.395287777946524,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,2.86447756719698,3.43706364687375,2.74033007908257,3.7769694869485,0.675022500231806,1.80128481289688,3.17199686288943,4.65984280576638,1.14166082342594,0.798049746802062,0.853668028770671,0.243106717068294,0,0.735374033800057,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.754505365544305,0.37456602987953,0.320125762024346,0.229741875822453,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,1.01537529470012,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0,0.749431733813838,0,0,0.382576664137687,0.220591419119515,0|short_description=p6@Apba2}} | ||
|EntrezGene=11784 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=E9Q0G5 | |||
|association_with_transcript=52bp_to_ENSMUST00000137732_5end | |||
|description=CAGE_peak_6_at_Apba2_5end | |||
|id=chr7:71647076..71647091,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.13e-20!33;CL:0000047!7.13e-20!33;CL:0000031!7.13e-20!33;CL:0000404!7.13e-20!33;CL:0000117!8.80e-20!23;CL:0000337!8.80e-20!23;CL:0002319!5.82e-18!43;CL:0000221!3.10e-17!44;CL:0000133!3.10e-17!44;CL:0000393!6.68e-15!39;CL:0000211!6.68e-15!39;CL:0000055!1.55e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-35,23;CL:0000337,1.59e-35,23;CL:0000540,1.01e-22,33;CL:0000047,1.01e-22,33;CL:0000031,1.01e-22,33;CL:0000404,1.01e-22,33;CL:0002319,1.23e-20,43;CL:0000221,5.31e-20,44;CL:0000133,5.31e-20,44;CL:0000393,3.24e-18,39;CL:0000211,3.24e-18,39;CL:0002321,5.69e-10,70;CL:0002609,6.77e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.87e-39!73;UBERON:0005743!9.87e-39!73;UBERON:0000073!5.42e-38!75;UBERON:0001016!5.42e-38!75;UBERON:0004121!6.80e-34!102;UBERON:0000924!6.80e-34!102;UBERON:0006601!6.80e-34!102;UBERON:0002346!9.45e-31!71;UBERON:0003075!9.45e-31!71;UBERON:0007284!9.45e-31!71;UBERON:0000033!3.87e-28!63;UBERON:0001049!7.32e-28!52;UBERON:0005068!7.32e-28!52;UBERON:0006241!7.32e-28!52;UBERON:0007135!7.32e-28!52;UBERON:0000955!8.57e-26!50;UBERON:0006238!8.57e-26!50;UBERON:0002616!4.77e-25!49;UBERON:0003056!3.33e-24!49;UBERON:0002020!1.43e-23!34;UBERON:0003080!6.44e-21!40;UBERON:0002780!4.96e-20!39;UBERON:0001890!4.96e-20!39;UBERON:0006240!4.96e-20!39;UBERON:0002791!3.63e-19!29;UBERON:0003528!3.63e-19!29;UBERON:0001893!3.63e-19!29;UBERON:0007811!3.83e-17!86;UBERON:0000153!1.59e-16!94;UBERON:0000956!9.51e-13!21;UBERON:0001869!9.51e-13!21;UBERON:0000203!9.51e-13!21;UBERON:0002619!2.22e-10!17;UBERON:0002021!6.61e-09!10;UBERON:0000411!6.61e-09!10;UBERON:0001950!6.61e-09!10;UBERON:0002420!9.80e-08!8;UBERON:0007245!9.80e-08!8;UBERON:0010009!9.80e-08!8;UBERON:0010011!9.80e-08!8;UBERON:0000454!9.80e-08!8;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-47,73;UBERON:0001016,1.35e-45,75;UBERON:0000073,5.92e-45,54;UBERON:0001049,6.98e-42,52;UBERON:0005068,6.98e-42,52;UBERON:0006241,6.98e-42,52;UBERON:0007135,6.98e-42,52;UBERON:0002020,2.54e-41,34;UBERON:0004121,1.60e-38,95;UBERON:0000924,1.60e-38,95;UBERON:0006601,1.60e-38,95;UBERON:0002346,8.69e-38,64;UBERON:0003075,8.69e-38,64;UBERON:0007284,8.69e-38,64;UBERON:0000955,1.19e-33,47;UBERON:0006238,1.19e-33,47;UBERON:0003528,3.97e-33,29;UBERON:0002791,3.97e-33,29;UBERON:0001893,3.97e-33,29;UBERON:0002616,2.30e-32,46;UBERON:0010371,8.71e-32,73;UBERON:0003080,1.75e-28,40;UBERON:0003056,4.74e-27,49;UBERON:0002780,5.85e-27,39;UBERON:0001890,5.85e-27,39;UBERON:0006240,5.85e-27,39;UBERON:0010314,5.57e-23,92;UBERON:0000956,3.13e-21,21;UBERON:0001869,3.13e-21,21;UBERON:0000203,3.13e-21,21;UBERON:0002619,7.64e-17,17;UBERON:0000025,1.64e-13,114;UBERON:0003076,2.13e-13,12;UBERON:0003057,2.13e-13,12;UBERON:0002420,4.74e-13,8;UBERON:0007245,4.74e-13,8;UBERON:0010009,4.74e-13,8;UBERON:0010011,4.74e-13,8;UBERON:0000454,4.74e-13,8;UBERON:0002021,8.09e-13,10;UBERON:0000411,8.09e-13,10;UBERON:0001950,8.09e-13,10;UBERON:0004111,5.70e-12,122;UBERON:0002240,6.97e-11,6;UBERON:0005174,6.97e-11,6;UBERON:0001137,6.97e-11,6;UBERON:0011216,2.46e-10,194;UBERON:0001948,3.31e-09,5;UBERON:0002315,3.31e-09,5;UBERON:0000369,6.66e-09,5;UBERON:0002435,6.66e-09,5;UBERON:0000204,6.66e-09,5;UBERON:0010082,6.66e-09,5;UBERON:0002950,2.59e-07,4;UBERON:0001891,2.59e-07,4;UBERON:0009616,2.59e-07,4;UBERON:0010286,2.59e-07,4;UBERON:0000483,3.43e-07,174;UBERON:0000119,5.38e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,6.67644320836673,3.1739458756322,6.33831403506179,0,0,0,0,0,1.79760066311043,2.30530983192933,1.65903379693564,1.62007125998029,1.68259969081106,3.42781181284564,3.75476519617743,2.44981598429908,2.97120960156533,4.5960939330501,3.30347642998166,4.46905683298157,2.91852413186863,5.53922408466814,5.94669683415663,2.08365348222704,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,4.55589378557129,3.54158947068071,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,3.59497534571574,1.83000241127451,3.76963056338593,2.08589184230732,3.58001640262463,2.70124457927428,2.92034273521964,0,0,0,0,0.260240885925407,0.459804208866946,0.720248519221397,0.452114453507145,2.04109497453984,1.40925092313335,2.71735001223214,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,2.26390147234426,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.88991061978026,3.39913891117389,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.584511715822624,0.395287777946524,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,2.86447756719698,3.43706364687375,2.74033007908257,3.7769694869485,0.675022500231806,1.80128481289688,3.17199686288943,4.65984280576638,1.14166082342594,0.798049746802062,0.853668028770671,0.243106717068294,0,0.735374033800057,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.754505365544305,0.37456602987953,0.320125762024346,0.229741875822453,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,1.01537529470012,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0,0.749431733813838,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p6@Apba2 | |||
}} |
Revision as of 14:04, 14 September 2013
Short description: | p6@Apba2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Apba2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 52bp_to_ENSMUST00000137732_5end |
EntrezGene: | Apba2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-35 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-35 | 23 |
neuron | 1.01e-22 | 33 |
neuronal stem cell | 1.01e-22 | 33 |
neuroblast | 1.01e-22 | 33 |
electrically signaling cell | 1.01e-22 | 33 |
neural cell | 1.23e-20 | 43 |
ectodermal cell | 5.31e-20 | 44 |
neurectodermal cell | 5.31e-20 | 44 |
electrically responsive cell | 3.24e-18 | 39 |
electrically active cell | 3.24e-18 | 39 |
embryonic cell | 5.69e-10 | 70 |
neuron of cerebral cortex | 6.77e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.