FFCP PHASE1:Mm9::chr7:52970050..52970066,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=493|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52970050..52970066,-|id=chr7:52970050..52970066,-|ontology_enrichment_celltype=CL:0002563!8.98e-08!9;CL:0002251!8.98e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.93e-10,9;CL:0002251,2.93e-10,9;CL:0000066,2.73e-09,25;CL:0000239,6.25e-08,6;CL:0000677,6.25e-08,6;CL:0000584,6.25e-08,6;CL:0000223,7.12e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.03e-19!43;UBERON:0005409!1.12e-19!59;UBERON:0001007!1.04e-13!128;UBERON:0001555!1.04e-13!128;UBERON:0007026!1.04e-13!128;UBERON:0004119!1.55e-13!130;UBERON:0000925!1.55e-13!130;UBERON:0006595!1.55e-13!130;UBERON:0004921!1.20e-12!126;UBERON:0004185!1.20e-12!126;UBERON:0000344!7.37e-12!15;UBERON:0001242!1.67e-10!13;UBERON:0000060!1.67e-10!13;UBERON:0001262!1.67e-10!13;UBERON:0004786!1.67e-10!13;UBERON:0003350!8.98e-08!9;UBERON:0004808!8.98e-08!9;UBERON:0001277!8.98e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.67e-28,47;UBERON:0000160,1.80e-27,31;UBERON:0001007,3.35e-16,116;UBERON:0001555,3.35e-16,116;UBERON:0007026,3.35e-16,116;UBERON:0000344,5.68e-16,15;UBERON:0004119,1.24e-15,118;UBERON:0000925,1.24e-15,118;UBERON:0006595,1.24e-15,118;UBERON:0004921,8.48e-15,114;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0003350,2.93e-10,9;UBERON:0004808,2.93e-10,9;UBERON:0001277,2.93e-10,9;UBERON:0004923,4.11e-08,24;UBERON:0000485,6.49e-08,11|phase1_expression=0,63.5135241903637,46.8649216571222,50.2090590769338,64.6155491630788,8.72972213941827,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,14.0793332058198,8.94696196161963,32.7312219545562,17.6612418425221,15.9448712187558,13.8717096203153,15.1218077855958,5.09980174507201,0,0,0,6.64358725427932,5.65197794218874,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,2.03991400112325,5.39703191637817,3.24888208723835,4.03224198387602,3.65155492342555,0,0,0,0,0,0,0,0.216491041011214,0,0,7.9928715803342,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,27.9587641827183,0,0,27.3339049073193,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,112.375951043377,0,0.229902104433473,0,0.150704817835715,0,0.384341160854549,0.187403449119458,34.4075483082891,0,0,0,0,0.834141747676794,2.43776516565517,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.466637286035,27.2384083663451,0,0.464473343720877,1.28867461322093,7.66397393568702,7.56085349072559,8.3699275489526,26.5736274464927,15.317002789333,9.0480675168097,7.56034593756373,9.55324026883689,26.9645822596266,19.6685625385972,22.5029638777435,0,0.114248512609729,0,0,0,1.05203729835478,2.15004226222475,1.32849133181642,3.45397201251025,5.30607804863742,0.296452627087149,0,0,0,0,0,0.25462585178142,0,3.24270453550071,1.09824565275233,0,2.23284568601102,0.312037673114561,3.03094653536534,2.33216637578486,4.82443521363367,1.10851914099963,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0,0,0.655453258862952,0.172684981865896,1.01254341007058,0,0,0,1.65562047782839,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0,0,0,0,0.329940245945071,0,0.728341908464944,0.906970670894253,0.377210159511796,2.06711325016541,0.307435147943927,3.10113951801865,0,1.42598951353889,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0.220528398054962,17.6428290647384,2.74489525383039,4.28221766989907,4.8942661041286,8.69946768648825,25.9417944600567,0,0,0,0,0,0,0,0,0,0,16.2294005062569,0,1.42323626988794,2.70013352054503,2.92723614420256,6.55087691238533,5.12484516262319,5.53778153359751,8.37619014348895,14.1280320888054,20.5041973318685,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.292373642219257,0,0,6.34845074122592,0.221985953374065,0,0,1.54551675225752,6.00583921443782,1.09890974560359,4.71610433973945,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,1.76888048234658,2.28131369901216,0.565879024158229,0.468207537349412,0.89635213366817,0.804096565378586,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,0.294397840268795,0,1.06485483695602,0,1.16277133305863,1.12931256498397,0.930760686808441,0.914639864363863,0.789209134313529,0.814824683075171,0,0.830445126869219,0.985044823755635,1.22769312950907,0.929621047115796,0.964533054905707,0.749431733813838,2.10538447600868,2.14871054048298,0.765153328275374,0.661774257358546,0|short_description=p@chr7:52970050..52970066,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=493 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:52970050..52970066,- | |||
|id=chr7:52970050..52970066,- | |||
|ontology_enrichment_celltype=CL:0002563!8.98e-08!9;CL:0002251!8.98e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.93e-10,9;CL:0002251,2.93e-10,9;CL:0000066,2.73e-09,25;CL:0000239,6.25e-08,6;CL:0000677,6.25e-08,6;CL:0000584,6.25e-08,6;CL:0000223,7.12e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.03e-19!43;UBERON:0005409!1.12e-19!59;UBERON:0001007!1.04e-13!128;UBERON:0001555!1.04e-13!128;UBERON:0007026!1.04e-13!128;UBERON:0004119!1.55e-13!130;UBERON:0000925!1.55e-13!130;UBERON:0006595!1.55e-13!130;UBERON:0004921!1.20e-12!126;UBERON:0004185!1.20e-12!126;UBERON:0000344!7.37e-12!15;UBERON:0001242!1.67e-10!13;UBERON:0000060!1.67e-10!13;UBERON:0001262!1.67e-10!13;UBERON:0004786!1.67e-10!13;UBERON:0003350!8.98e-08!9;UBERON:0004808!8.98e-08!9;UBERON:0001277!8.98e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.67e-28,47;UBERON:0000160,1.80e-27,31;UBERON:0001007,3.35e-16,116;UBERON:0001555,3.35e-16,116;UBERON:0007026,3.35e-16,116;UBERON:0000344,5.68e-16,15;UBERON:0004119,1.24e-15,118;UBERON:0000925,1.24e-15,118;UBERON:0006595,1.24e-15,118;UBERON:0004921,8.48e-15,114;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0003350,2.93e-10,9;UBERON:0004808,2.93e-10,9;UBERON:0001277,2.93e-10,9;UBERON:0004923,4.11e-08,24;UBERON:0000485,6.49e-08,11 | |||
|phase1_expression=0,63.5135241903637,46.8649216571222,50.2090590769338,64.6155491630788,8.72972213941827,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,14.0793332058198,8.94696196161963,32.7312219545562,17.6612418425221,15.9448712187558,13.8717096203153,15.1218077855958,5.09980174507201,0,0,0,6.64358725427932,5.65197794218874,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,2.03991400112325,5.39703191637817,3.24888208723835,4.03224198387602,3.65155492342555,0,0,0,0,0,0,0,0.216491041011214,0,0,7.9928715803342,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,27.9587641827183,0,0,27.3339049073193,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,112.375951043377,0,0.229902104433473,0,0.150704817835715,0,0.384341160854549,0.187403449119458,34.4075483082891,0,0,0,0,0.834141747676794,2.43776516565517,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.466637286035,27.2384083663451,0,0.464473343720877,1.28867461322093,7.66397393568702,7.56085349072559,8.3699275489526,26.5736274464927,15.317002789333,9.0480675168097,7.56034593756373,9.55324026883689,26.9645822596266,19.6685625385972,22.5029638777435,0,0.114248512609729,0,0,0,1.05203729835478,2.15004226222475,1.32849133181642,3.45397201251025,5.30607804863742,0.296452627087149,0,0,0,0,0,0.25462585178142,0,3.24270453550071,1.09824565275233,0,2.23284568601102,0.312037673114561,3.03094653536534,2.33216637578486,4.82443521363367,1.10851914099963,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0,0,0.655453258862952,0.172684981865896,1.01254341007058,0,0,0,1.65562047782839,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0,0,0,0,0.329940245945071,0,0.728341908464944,0.906970670894253,0.377210159511796,2.06711325016541,0.307435147943927,3.10113951801865,0,1.42598951353889,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0.220528398054962,17.6428290647384,2.74489525383039,4.28221766989907,4.8942661041286,8.69946768648825,25.9417944600567,0,0,0,0,0,0,0,0,0,0,16.2294005062569,0,1.42323626988794,2.70013352054503,2.92723614420256,6.55087691238533,5.12484516262319,5.53778153359751,8.37619014348895,14.1280320888054,20.5041973318685,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.292373642219257,0,0,6.34845074122592,0.221985953374065,0,0,1.54551675225752,6.00583921443782,1.09890974560359,4.71610433973945,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,1.76888048234658,2.28131369901216,0.565879024158229,0.468207537349412,0.89635213366817,0.804096565378586,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,0.294397840268795,0,1.06485483695602,0,1.16277133305863,1.12931256498397,0.930760686808441,0.914639864363863,0.789209134313529,0.814824683075171,0,0.830445126869219,0.985044823755635,1.22769312950907,0.929621047115796,0.964533054905707,0.749431733813838,2.10538447600868,2.14871054048298,0.765153328275374,0.661774257358546,0 | |||
|short_description=p@chr7:52970050..52970066,- | |||
}} |
Revision as of 13:48, 14 September 2013
Short description: | p@chr7:52970050..52970066, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52970050..52970066, - |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.93e-10 | 9 |
epithelial cell of alimentary canal | 2.93e-10 | 9 |
epithelial cell | 2.73e-09 | 25 |
brush border epithelial cell | 6.25e-08 | 6 |
gut absorptive cell | 6.25e-08 | 6 |
enterocyte | 6.25e-08 | 6 |
endodermal cell | 7.12e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.67e-28 | 47 |
intestine | 1.80e-27 | 31 |
digestive system | 3.35e-16 | 116 |
digestive tract | 3.35e-16 | 116 |
primitive gut | 3.35e-16 | 116 |
mucosa | 5.68e-16 | 15 |
endoderm-derived structure | 1.24e-15 | 118 |
endoderm | 1.24e-15 | 118 |
presumptive endoderm | 1.24e-15 | 118 |
subdivision of digestive tract | 8.48e-15 | 114 |
intestinal mucosa | 4.48e-14 | 13 |
wall of intestine | 4.48e-14 | 13 |
gastrointestinal system mucosa | 4.48e-14 | 13 |
epithelium of mucosa | 2.93e-10 | 9 |
gastrointestinal system epithelium | 2.93e-10 | 9 |
intestinal epithelium | 2.93e-10 | 9 |
organ component layer | 4.11e-08 | 24 |
simple columnar epithelium | 6.49e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.