FFCP PHASE1:Mm9::chr7:20257042..20257052,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=309|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20257042..20257052,-|id=chr7:20257042..20257052,-|ontology_enrichment_celltype=CL:0000239!6.80e-14!6;CL:0000677!6.80e-14!6;CL:0000212!6.80e-14!6;CL:0000584!6.80e-14!6;CL:0000075!7.28e-12!7;CL:0000066!2.54e-09!25;CL:0002563!3.74e-09!9;CL:0002251!3.74e-09!9;CL:0000223!2.94e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,4.62e-27,6;CL:0000677,4.62e-27,6;CL:0000584,4.62e-27,6;CL:0000075,2.44e-23,7;CL:0002563,2.30e-18,9;CL:0002251,2.30e-18,9;CL:0000066,7.02e-12,25;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000682,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.47e-14!43;UBERON:0001242!1.19e-11!13;UBERON:0000060!1.19e-11!13;UBERON:0001262!1.19e-11!13;UBERON:0004786!1.19e-11!13;UBERON:0000344!5.78e-10!15;UBERON:0005409!2.98e-09!59;UBERON:0003350!3.74e-09!9;UBERON:0004808!3.74e-09!9;UBERON:0001277!3.74e-09!9;UBERON:0004923!1.73e-07!24;UBERON:0000485!2.01e-07!11;UBERON:0004921!6.73e-07!126;UBERON:0004185!6.73e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-18,9;UBERON:0004808,2.30e-18,9;UBERON:0001277,2.30e-18,9;UBERON:0000485,3.43e-15,11;UBERON:0001242,5.49e-13,13;UBERON:0001262,5.49e-13,13;UBERON:0004786,5.49e-13,13;UBERON:0000344,2.29e-11,15;UBERON:0000160,1.10e-09,31;UBERON:0004923,2.18e-07,24|phase1_expression=0,0.348975407639361,1.36499771816861,4.83942738090928,25.0447864973174,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.86152399231815,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0,0.988193728344065,1.00534083520108,0.994782360205754,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:20257042..20257052,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=309 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:20257042..20257052,- | |||
|id=chr7:20257042..20257052,- | |||
|ontology_enrichment_celltype=CL:0000239!6.80e-14!6;CL:0000677!6.80e-14!6;CL:0000212!6.80e-14!6;CL:0000584!6.80e-14!6;CL:0000075!7.28e-12!7;CL:0000066!2.54e-09!25;CL:0002563!3.74e-09!9;CL:0002251!3.74e-09!9;CL:0000223!2.94e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.62e-27,6;CL:0000677,4.62e-27,6;CL:0000584,4.62e-27,6;CL:0000075,2.44e-23,7;CL:0002563,2.30e-18,9;CL:0002251,2.30e-18,9;CL:0000066,7.02e-12,25;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000682,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.47e-14!43;UBERON:0001242!1.19e-11!13;UBERON:0000060!1.19e-11!13;UBERON:0001262!1.19e-11!13;UBERON:0004786!1.19e-11!13;UBERON:0000344!5.78e-10!15;UBERON:0005409!2.98e-09!59;UBERON:0003350!3.74e-09!9;UBERON:0004808!3.74e-09!9;UBERON:0001277!3.74e-09!9;UBERON:0004923!1.73e-07!24;UBERON:0000485!2.01e-07!11;UBERON:0004921!6.73e-07!126;UBERON:0004185!6.73e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-18,9;UBERON:0004808,2.30e-18,9;UBERON:0001277,2.30e-18,9;UBERON:0000485,3.43e-15,11;UBERON:0001242,5.49e-13,13;UBERON:0001262,5.49e-13,13;UBERON:0004786,5.49e-13,13;UBERON:0000344,2.29e-11,15;UBERON:0000160,1.10e-09,31;UBERON:0004923,2.18e-07,24 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,4.83942738090928,25.0447864973174,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.86152399231815,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0,0.988193728344065,1.00534083520108,0.994782360205754,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:20257042..20257052,- | |||
}} |
Revision as of 12:43, 14 September 2013
Short description: | p@chr7:20257042..20257052, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20257042..20257052, - |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.62e-27 | 6 |
gut absorptive cell | 4.62e-27 | 6 |
enterocyte | 4.62e-27 | 6 |
columnar/cuboidal epithelial cell | 2.44e-23 | 7 |
intestinal epithelial cell | 2.30e-18 | 9 |
epithelial cell of alimentary canal | 2.30e-18 | 9 |
epithelial cell | 7.02e-12 | 25 |
endo-epithelial cell | 2.29e-11 | 15 |
endodermal cell | 1.01e-08 | 20 |
M cell of gut | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.30e-18 | 9 |
gastrointestinal system epithelium | 2.30e-18 | 9 |
intestinal epithelium | 2.30e-18 | 9 |
simple columnar epithelium | 3.43e-15 | 11 |
intestinal mucosa | 5.49e-13 | 13 |
wall of intestine | 5.49e-13 | 13 |
gastrointestinal system mucosa | 5.49e-13 | 13 |
mucosa | 2.29e-11 | 15 |
intestine | 1.10e-09 | 31 |
organ component layer | 2.18e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.