FFCP PHASE1:Mm9::chr7:15032000..15032021,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76971|HGNC=|MCL_coexpression_id=73|UniProt=Q8BGL3|association_with_transcript=-64bp_to_NM_175250,uc009fgc.2,uc012ezu.1_5end|description=CAGE_peak_2_at_2810007J24Rik_5end|id=chr7:15032000..15032021,-|ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000057!3.59e-07!1;CL:0000632!3.59e-07!1;CL:0000223!4.14e-07!20|ontology_enrichment_celltype_v019_2=CL:0000182,2.23e-40,5;CL:0000223,3.37e-10,20;CL:0000057,1.44e-09,1;CL:0000632,1.44e-09,1;CL:0000213,6.33e-09,1;CL:0002078,6.33e-09,1;CL:0000115,6.33e-09,1;CL:0002262,6.33e-09,1;CL:1000398,6.33e-09,1;CL:0000066,3.68e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.40e-16!22;UBERON:0007499!8.40e-16!22;UBERON:0006925!8.40e-16!22;UBERON:0009497!8.40e-16!22;UBERON:0000015!8.40e-16!22;UBERON:0002423!8.40e-16!22;UBERON:0006235!8.40e-16!22;UBERON:0008835!8.40e-16!22;UBERON:0003894!8.40e-16!22;UBERON:0004161!8.40e-16!22;UBERON:0008836!8.40e-16!22;UBERON:0009854!4.45e-15!23;UBERON:0009856!4.45e-15!23;UBERON:0002365!8.38e-14!25;UBERON:0002330!8.38e-14!25;UBERON:0003914!1.04e-10!47;UBERON:0005256!9.80e-09!47;UBERON:0005172!2.48e-08!49;UBERON:0005173!2.48e-08!49;UBERON:0002417!2.48e-08!49;UBERON:0000916!2.48e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.90e-23,22;UBERON:0007499,6.90e-23,22;UBERON:0006925,6.90e-23,22;UBERON:0009497,6.90e-23,22;UBERON:0000015,6.90e-23,22;UBERON:0002423,6.90e-23,22;UBERON:0006235,6.90e-23,22;UBERON:0008835,6.90e-23,22;UBERON:0003894,6.90e-23,22;UBERON:0004161,6.90e-23,22;UBERON:0008836,6.90e-23,22;UBERON:0009854,7.08e-22,23;UBERON:0009856,7.08e-22,23;UBERON:0002365,4.28e-20,25;UBERON:0002330,4.28e-20,25;UBERON:0005256,8.10e-14,45;UBERON:0005172,1.22e-12,49;UBERON:0005173,1.22e-12,49;UBERON:0002417,1.22e-12,49;UBERON:0000916,1.22e-12,49;UBERON:0003914,1.82e-10,47;UBERON:0002368,3.33e-10,60;UBERON:0003104,5.02e-10,61;UBERON:0009142,5.02e-10,61;UBERON:0002530,2.29e-09,65;UBERON:0009569,3.26e-09,66;UBERON:0002394,6.33e-09,1;UBERON:0001281,6.33e-09,1;UBERON:0000353,6.33e-09,1;UBERON:0003497,6.33e-09,1;UBERON:0003909,6.33e-09,1;UBERON:0003928,6.33e-09,1;UBERON:0003835,6.33e-09,1;UBERON:0003513,6.33e-09,1;UBERON:0001280,6.33e-09,1;UBERON:0004647,6.33e-09,1;UBERON:0002294,6.33e-09,1;UBERON:0001173,6.33e-09,1;UBERON:0004912,6.33e-09,1;UBERON:0005171,6.33e-09,1;UBERON:0003929,7.34e-09,55;UBERON:0000949,2.19e-08,72;UBERON:0005177,1.41e-07,79;UBERON:0000490,2.78e-07,66;UBERON:0005911,6.14e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,152.295026225705,84.9964167134688,290.360317101146,129.305507072086,161.737706242138,70.2222100658759,0,0,0,0,0,0,0,0,0,0,88.2641390228334,0,1.1875371125186,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8268522857105,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15276896226295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@2810007J24Rik}} | ||
|EntrezGene=76971 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=Q8BGL3 | |||
|association_with_transcript=-64bp_to_NM_175250,uc009fgc.2,uc012ezu.1_5end | |||
|description=CAGE_peak_2_at_2810007J24Rik_5end | |||
|id=chr7:15032000..15032021,- | |||
|ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000057!3.59e-07!1;CL:0000632!3.59e-07!1;CL:0000223!4.14e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.23e-40,5;CL:0000223,3.37e-10,20;CL:0000057,1.44e-09,1;CL:0000632,1.44e-09,1;CL:0000213,6.33e-09,1;CL:0002078,6.33e-09,1;CL:0000115,6.33e-09,1;CL:0002262,6.33e-09,1;CL:1000398,6.33e-09,1;CL:0000066,3.68e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.40e-16!22;UBERON:0007499!8.40e-16!22;UBERON:0006925!8.40e-16!22;UBERON:0009497!8.40e-16!22;UBERON:0000015!8.40e-16!22;UBERON:0002423!8.40e-16!22;UBERON:0006235!8.40e-16!22;UBERON:0008835!8.40e-16!22;UBERON:0003894!8.40e-16!22;UBERON:0004161!8.40e-16!22;UBERON:0008836!8.40e-16!22;UBERON:0009854!4.45e-15!23;UBERON:0009856!4.45e-15!23;UBERON:0002365!8.38e-14!25;UBERON:0002330!8.38e-14!25;UBERON:0003914!1.04e-10!47;UBERON:0005256!9.80e-09!47;UBERON:0005172!2.48e-08!49;UBERON:0005173!2.48e-08!49;UBERON:0002417!2.48e-08!49;UBERON:0000916!2.48e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.90e-23,22;UBERON:0007499,6.90e-23,22;UBERON:0006925,6.90e-23,22;UBERON:0009497,6.90e-23,22;UBERON:0000015,6.90e-23,22;UBERON:0002423,6.90e-23,22;UBERON:0006235,6.90e-23,22;UBERON:0008835,6.90e-23,22;UBERON:0003894,6.90e-23,22;UBERON:0004161,6.90e-23,22;UBERON:0008836,6.90e-23,22;UBERON:0009854,7.08e-22,23;UBERON:0009856,7.08e-22,23;UBERON:0002365,4.28e-20,25;UBERON:0002330,4.28e-20,25;UBERON:0005256,8.10e-14,45;UBERON:0005172,1.22e-12,49;UBERON:0005173,1.22e-12,49;UBERON:0002417,1.22e-12,49;UBERON:0000916,1.22e-12,49;UBERON:0003914,1.82e-10,47;UBERON:0002368,3.33e-10,60;UBERON:0003104,5.02e-10,61;UBERON:0009142,5.02e-10,61;UBERON:0002530,2.29e-09,65;UBERON:0009569,3.26e-09,66;UBERON:0002394,6.33e-09,1;UBERON:0001281,6.33e-09,1;UBERON:0000353,6.33e-09,1;UBERON:0003497,6.33e-09,1;UBERON:0003909,6.33e-09,1;UBERON:0003928,6.33e-09,1;UBERON:0003835,6.33e-09,1;UBERON:0003513,6.33e-09,1;UBERON:0001280,6.33e-09,1;UBERON:0004647,6.33e-09,1;UBERON:0002294,6.33e-09,1;UBERON:0001173,6.33e-09,1;UBERON:0004912,6.33e-09,1;UBERON:0005171,6.33e-09,1;UBERON:0003929,7.34e-09,55;UBERON:0000949,2.19e-08,72;UBERON:0005177,1.41e-07,79;UBERON:0000490,2.78e-07,66;UBERON:0005911,6.14e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,152.295026225705,84.9964167134688,290.360317101146,129.305507072086,161.737706242138,70.2222100658759,0,0,0,0,0,0,0,0,0,0,88.2641390228334,0,1.1875371125186,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8268522857105,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15276896226295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@2810007J24Rik | |||
}} |
Revision as of 12:28, 14 September 2013
Short description: | p2@2810007J24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2810007J24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | -64bp_to_NM_175250, uc009fgc.2, uc012ezu.1_5end |
EntrezGene: | 2810007J24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.23e-40 | 5 |
endodermal cell | 3.37e-10 | 20 |
fibroblast | 1.44e-09 | 1 |
hepatic stellate cell | 1.44e-09 | 1 |
lining cell | 6.33e-09 | 1 |
meso-epithelial cell | 6.33e-09 | 1 |
endothelial cell | 6.33e-09 | 1 |
endothelial cell of sinusoid | 6.33e-09 | 1 |
endothelial cell of hepatic sinusoid | 6.33e-09 | 1 |
epithelial cell | 3.68e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.