FFCP PHASE1:Mm9::chr7:138175575..138175588,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12945|HGNC=|MCL_coexpression_id=23|UniProt=E9QPG8,Q60997|association_with_transcript=-1bp_to_ENSMUST00000084509,NM_007769,uc009kaw.1,uc009kax.1_5end|description=CAGE_peak_1_at_Dmbt1_5end|id=chr7:138175575..138175588,+|ontology_enrichment_celltype=CL:0002563!1.73e-07!9;CL:0002251!1.73e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.42e-34!59;UBERON:0000160!9.62e-29!43;UBERON:0001007!1.45e-19!128;UBERON:0001555!1.45e-19!128;UBERON:0007026!1.45e-19!128;UBERON:0004119!8.23e-19!130;UBERON:0000925!8.23e-19!130;UBERON:0006595!8.23e-19!130;UBERON:0004921!3.45e-18!126;UBERON:0004185!3.45e-18!126;UBERON:0000344!4.43e-12!15;UBERON:0002108!1.48e-11!16;UBERON:0001242!1.60e-10!13;UBERON:0000060!1.60e-10!13;UBERON:0001262!1.60e-10!13;UBERON:0004786!1.60e-10!13;UBERON:0001045!2.08e-09!13;UBERON:0004923!2.61e-09!24;UBERON:0002075!1.23e-08!19;UBERON:0001264!1.44e-08!12;UBERON:0003922!1.44e-08!12;UBERON:0002114!1.44e-08!12;UBERON:0003923!1.44e-08!12;UBERON:0003924!1.44e-08!12;UBERON:0003921!1.44e-08!12;UBERON:0003350!1.73e-07!9;UBERON:0004808!1.73e-07!9;UBERON:0001277!1.73e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.22e-25,47;UBERON:0000160,1.05e-22,31;UBERON:0000344,1.11e-13,15;UBERON:0001242,6.93e-12,13;UBERON:0001262,6.93e-12,13;UBERON:0004786,6.93e-12,13;UBERON:0001264,9.23e-10,12;UBERON:0001007,2.24e-09,116;UBERON:0001555,2.24e-09,116;UBERON:0007026,2.24e-09,116;UBERON:0004119,6.05e-09,118;UBERON:0000925,6.05e-09,118;UBERON:0006595,6.05e-09,118;UBERON:0004923,1.61e-08,24;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0004921,2.36e-08,114|phase1_expression=0,529.395693388911,630.628945793897,170.892279388359,221.395912636285,557.694941291298,555.063634054969,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,834.520477290409,705.892357843682,528.867638949934,753.833493278381,840.553278707653,574.440797016618,552.450044433768,1224.17414932794,0,0,0,414.213222723328,494.714304586873,354.029663758948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,5.16254326188832,0,0,0,0,105.754648359209,0,0,0,0,0,0,0,0,0,0,143.757504566296,0,0,0,0,0.230615497256059,0.904335843315735,0,0.125666591329675,0,0,0,0.323533699894818,0,0,1310.3340813634,0,0.209446706813455,1166.92782819285,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.2562274405697,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,755.337337900962,1110.95683055355,0,0.232236671860439,66.8822124261664,181.918539210255,147.436643069149,197.644425530949,764.466318148208,145.75857493075,298.08355763712,247.899764163274,321.30081557231,755.008303269546,549.639060831347,852.523790801946,0,0,0,0,0,3.22624771495465,0.252946148497029,5.16635517928608,0,0,44.1714414359852,0,0,0,0,0.482354319504834,2.03700681425136,0,1.45921704097532,3.29473695825698,0,3.34926852901653,8.11297950097858,30.0568864757063,28.524188749984,10.6137574699941,0.184753190166605,0,0,0.848725428875941,0,0,0,6.63454402716516,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,4.45419332025846,9223.13221186062,0,5.44182402536552,24.3300552885109,220.295212089056,1296.45401887954,1397.83863774691,2335.70421189297,2386.03695352894,4377.42513416899,14489.7877486336,8707.73391644441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,5.58079059133208,572.759843977657,0,0.170870880797853,0.412773735926445,9.63011542322501,0.941842285023455,9.56859594047176,0,0,0,0,112.651132925783,0,10.9792512248498,63.8311564256845,38.2631581706478,176.000226379419,170.198805137644,49.6747268909269,51.8276765128379,2809.14531615303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.807731599585181,0.304827226619999,0.100826185136841,0.682205165178267,0.384847366561318,0,778.138676567405,0,0,0,0.579568782096571,0,2.38097111547445,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8897074730927,0.209613162627982,2.20612210140017,6.44515510624684,7.62329711783909,6.09746498224449,7.58091635291392,8.61829619626815,8.48818536237343,7.58496210506047,10.1799992323742,8.84506221916444,9.52587382566147,11.3566639425958,9.25964258225784,6.59337441285291,7.21274708658547,5.48590803816665,7.45398385869217,7.39152188836695,6.83128158171944,7.71696919405711,8.88453382862603,6.95126296916536,4.20911538300549,9.64209208305619,1.68342681497322,7.23673610557462,8.66839444904958,14.3230865109391,8.2116525828562,9.83823716003821,0,18.2466654587419,21.7019764588781,2.29545998482612,5.29419405886837,1.39120701372253|short_description=p1@Dmbt1}} | ||
|EntrezGene=12945 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=E9QPG8,Q60997 | |||
|association_with_transcript=-1bp_to_ENSMUST00000084509,NM_007769,uc009kaw.1,uc009kax.1_5end | |||
|description=CAGE_peak_1_at_Dmbt1_5end | |||
|id=chr7:138175575..138175588,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.73e-07!9;CL:0002251!1.73e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.42e-34!59;UBERON:0000160!9.62e-29!43;UBERON:0001007!1.45e-19!128;UBERON:0001555!1.45e-19!128;UBERON:0007026!1.45e-19!128;UBERON:0004119!8.23e-19!130;UBERON:0000925!8.23e-19!130;UBERON:0006595!8.23e-19!130;UBERON:0004921!3.45e-18!126;UBERON:0004185!3.45e-18!126;UBERON:0000344!4.43e-12!15;UBERON:0002108!1.48e-11!16;UBERON:0001242!1.60e-10!13;UBERON:0000060!1.60e-10!13;UBERON:0001262!1.60e-10!13;UBERON:0004786!1.60e-10!13;UBERON:0001045!2.08e-09!13;UBERON:0004923!2.61e-09!24;UBERON:0002075!1.23e-08!19;UBERON:0001264!1.44e-08!12;UBERON:0003922!1.44e-08!12;UBERON:0002114!1.44e-08!12;UBERON:0003923!1.44e-08!12;UBERON:0003924!1.44e-08!12;UBERON:0003921!1.44e-08!12;UBERON:0003350!1.73e-07!9;UBERON:0004808!1.73e-07!9;UBERON:0001277!1.73e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.22e-25,47;UBERON:0000160,1.05e-22,31;UBERON:0000344,1.11e-13,15;UBERON:0001242,6.93e-12,13;UBERON:0001262,6.93e-12,13;UBERON:0004786,6.93e-12,13;UBERON:0001264,9.23e-10,12;UBERON:0001007,2.24e-09,116;UBERON:0001555,2.24e-09,116;UBERON:0007026,2.24e-09,116;UBERON:0004119,6.05e-09,118;UBERON:0000925,6.05e-09,118;UBERON:0006595,6.05e-09,118;UBERON:0004923,1.61e-08,24;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0004921,2.36e-08,114 | |||
|phase1_expression=0,529.395693388911,630.628945793897,170.892279388359,221.395912636285,557.694941291298,555.063634054969,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,834.520477290409,705.892357843682,528.867638949934,753.833493278381,840.553278707653,574.440797016618,552.450044433768,1224.17414932794,0,0,0,414.213222723328,494.714304586873,354.029663758948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,5.16254326188832,0,0,0,0,105.754648359209,0,0,0,0,0,0,0,0,0,0,143.757504566296,0,0,0,0,0.230615497256059,0.904335843315735,0,0.125666591329675,0,0,0,0.323533699894818,0,0,1310.3340813634,0,0.209446706813455,1166.92782819285,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.2562274405697,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,755.337337900962,1110.95683055355,0,0.232236671860439,66.8822124261664,181.918539210255,147.436643069149,197.644425530949,764.466318148208,145.75857493075,298.08355763712,247.899764163274,321.30081557231,755.008303269546,549.639060831347,852.523790801946,0,0,0,0,0,3.22624771495465,0.252946148497029,5.16635517928608,0,0,44.1714414359852,0,0,0,0,0.482354319504834,2.03700681425136,0,1.45921704097532,3.29473695825698,0,3.34926852901653,8.11297950097858,30.0568864757063,28.524188749984,10.6137574699941,0.184753190166605,0,0,0.848725428875941,0,0,0,6.63454402716516,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,4.45419332025846,9223.13221186062,0,5.44182402536552,24.3300552885109,220.295212089056,1296.45401887954,1397.83863774691,2335.70421189297,2386.03695352894,4377.42513416899,14489.7877486336,8707.73391644441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,5.58079059133208,572.759843977657,0,0.170870880797853,0.412773735926445,9.63011542322501,0.941842285023455,9.56859594047176,0,0,0,0,112.651132925783,0,10.9792512248498,63.8311564256845,38.2631581706478,176.000226379419,170.198805137644,49.6747268909269,51.8276765128379,2809.14531615303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.807731599585181,0.304827226619999,0.100826185136841,0.682205165178267,0.384847366561318,0,778.138676567405,0,0,0,0.579568782096571,0,2.38097111547445,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8897074730927,0.209613162627982,2.20612210140017,6.44515510624684,7.62329711783909,6.09746498224449,7.58091635291392,8.61829619626815,8.48818536237343,7.58496210506047,10.1799992323742,8.84506221916444,9.52587382566147,11.3566639425958,9.25964258225784,6.59337441285291,7.21274708658547,5.48590803816665,7.45398385869217,7.39152188836695,6.83128158171944,7.71696919405711,8.88453382862603,6.95126296916536,4.20911538300549,9.64209208305619,1.68342681497322,7.23673610557462,8.66839444904958,14.3230865109391,8.2116525828562,9.83823716003821,0,18.2466654587419,21.7019764588781,2.29545998482612,5.29419405886837,1.39120701372253 | |||
|short_description=p1@Dmbt1 | |||
}} |
Revision as of 12:03, 14 September 2013
Short description: | p1@Dmbt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dmbt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | -1bp_to_ENSMUST00000084509, NM_007769, uc009kaw.1, uc009kax.1_5end |
EntrezGene: | Dmbt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.16e-08 | 9 |
epithelial cell of alimentary canal | 2.16e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.22e-25 | 47 |
intestine | 1.05e-22 | 31 |
mucosa | 1.11e-13 | 15 |
intestinal mucosa | 6.93e-12 | 13 |
wall of intestine | 6.93e-12 | 13 |
gastrointestinal system mucosa | 6.93e-12 | 13 |
pancreas | 9.23e-10 | 12 |
digestive system | 2.24e-09 | 116 |
digestive tract | 2.24e-09 | 116 |
primitive gut | 2.24e-09 | 116 |
endoderm-derived structure | 6.05e-09 | 118 |
endoderm | 6.05e-09 | 118 |
presumptive endoderm | 6.05e-09 | 118 |
organ component layer | 1.61e-08 | 24 |
epithelium of mucosa | 2.16e-08 | 9 |
gastrointestinal system epithelium | 2.16e-08 | 9 |
intestinal epithelium | 2.16e-08 | 9 |
subdivision of digestive tract | 2.36e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.