FFCP PHASE1:Mm9::chr7:127317341..127317346,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72074|HGNC=|MCL_coexpression_id=12|UniProt=Q8K3X6|association_with_transcript=-25bp_to_ENSMUST00000033201,NM_028085,uc009jmj.2_5end|description=CAGE_peak_3_at_Anks4b_5end|id=chr7:127317341..127317346,+|ontology_enrichment_celltype=CL:0002563!1.65e-09!9;CL:0002251!1.65e-09!9;CL:0000239!2.48e-07!6;CL:0000677!2.48e-07!6;CL:0000212!2.48e-07!6;CL:0000584!2.48e-07!6;CL:0000066!5.34e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,8.46e-11,6;CL:0000677,8.46e-11,6;CL:0000584,8.46e-11,6;CL:0000066,4.86e-10,25;CL:0002563,9.21e-10,9;CL:0002251,9.21e-10,9;CL:0000075,3.33e-09,7;CL:0000682,1.68e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.43e-23!43;UBERON:0005409!2.09e-21!59;UBERON:0001007!1.94e-17!128;UBERON:0001555!1.94e-17!128;UBERON:0007026!1.94e-17!128;UBERON:0004119!7.29e-17!130;UBERON:0000925!7.29e-17!130;UBERON:0006595!7.29e-17!130;UBERON:0004921!5.18e-16!126;UBERON:0004185!5.18e-16!126;UBERON:0000344!1.92e-15!15;UBERON:0001242!1.38e-13!13;UBERON:0000060!1.38e-13!13;UBERON:0001262!1.38e-13!13;UBERON:0004786!1.38e-13!13;UBERON:0002107!4.03e-10!22;UBERON:0007499!4.03e-10!22;UBERON:0006925!4.03e-10!22;UBERON:0009497!4.03e-10!22;UBERON:0000015!4.03e-10!22;UBERON:0002423!4.03e-10!22;UBERON:0006235!4.03e-10!22;UBERON:0008835!4.03e-10!22;UBERON:0003894!4.03e-10!22;UBERON:0004161!4.03e-10!22;UBERON:0008836!4.03e-10!22;UBERON:0003350!1.65e-09!9;UBERON:0004808!1.65e-09!9;UBERON:0001277!1.65e-09!9;UBERON:0009854!1.89e-09!23;UBERON:0009856!1.89e-09!23;UBERON:0004923!5.74e-09!24;UBERON:0002365!2.81e-08!25;UBERON:0002330!2.81e-08!25;UBERON:0003929!3.74e-08!55;UBERON:0000485!2.67e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-40,31;UBERON:0005409,3.40e-27,47;UBERON:0000344,4.61e-19,15;UBERON:0001242,3.45e-18,13;UBERON:0001262,3.45e-18,13;UBERON:0004786,3.45e-18,13;UBERON:0001007,1.21e-17,116;UBERON:0001555,1.21e-17,116;UBERON:0007026,1.21e-17,116;UBERON:0004119,3.14e-17,118;UBERON:0000925,3.14e-17,118;UBERON:0006595,3.14e-17,118;UBERON:0004921,1.48e-16,114;UBERON:0004923,4.78e-11,24;UBERON:0002108,2.96e-10,4;UBERON:0003350,9.21e-10,9;UBERON:0004808,9.21e-10,9;UBERON:0001277,9.21e-10,9;UBERON:0000331,3.77e-08,3;UBERON:0002116,3.77e-08,3;UBERON:0001204,3.77e-08,3;UBERON:0001168,3.77e-08,3;UBERON:0000485,7.33e-08,11;UBERON:0011216,5.90e-07,194|phase1_expression=0,5.58360652222978,1.36499771816861,3.0246421130683,3.00537437967808,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,0.68822784320151,1.72269589234506,3.01533397311352,3.01659725760245,2.09025761402011,2.77233142735924,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,1.07940638327563,0,1.34408066129201,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,3.43785736662608,0,0,0.515469845288373,0.80673409849337,2.2237804384487,2.66315876557583,2.37264530772256,3.12928013975621,2.5133520880027,3.78017296878187,2.33956904542944,2.69645822596266,2.80979464837102,2.38969527905241,0,0,0,0,0,0.0701358198903186,0.379419222745544,0.442830443938806,0.31399745568275,0.493588655687202,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,0,1.11642284300551,1.24815069245824,2.02063102357689,1.79397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0|short_description=p3@Anks4b}} | ||
|EntrezGene=72074 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q8K3X6 | |||
|association_with_transcript=-25bp_to_ENSMUST00000033201,NM_028085,uc009jmj.2_5end | |||
|description=CAGE_peak_3_at_Anks4b_5end | |||
|id=chr7:127317341..127317346,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.65e-09!9;CL:0002251!1.65e-09!9;CL:0000239!2.48e-07!6;CL:0000677!2.48e-07!6;CL:0000212!2.48e-07!6;CL:0000584!2.48e-07!6;CL:0000066!5.34e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.46e-11,6;CL:0000677,8.46e-11,6;CL:0000584,8.46e-11,6;CL:0000066,4.86e-10,25;CL:0002563,9.21e-10,9;CL:0002251,9.21e-10,9;CL:0000075,3.33e-09,7;CL:0000682,1.68e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.43e-23!43;UBERON:0005409!2.09e-21!59;UBERON:0001007!1.94e-17!128;UBERON:0001555!1.94e-17!128;UBERON:0007026!1.94e-17!128;UBERON:0004119!7.29e-17!130;UBERON:0000925!7.29e-17!130;UBERON:0006595!7.29e-17!130;UBERON:0004921!5.18e-16!126;UBERON:0004185!5.18e-16!126;UBERON:0000344!1.92e-15!15;UBERON:0001242!1.38e-13!13;UBERON:0000060!1.38e-13!13;UBERON:0001262!1.38e-13!13;UBERON:0004786!1.38e-13!13;UBERON:0002107!4.03e-10!22;UBERON:0007499!4.03e-10!22;UBERON:0006925!4.03e-10!22;UBERON:0009497!4.03e-10!22;UBERON:0000015!4.03e-10!22;UBERON:0002423!4.03e-10!22;UBERON:0006235!4.03e-10!22;UBERON:0008835!4.03e-10!22;UBERON:0003894!4.03e-10!22;UBERON:0004161!4.03e-10!22;UBERON:0008836!4.03e-10!22;UBERON:0003350!1.65e-09!9;UBERON:0004808!1.65e-09!9;UBERON:0001277!1.65e-09!9;UBERON:0009854!1.89e-09!23;UBERON:0009856!1.89e-09!23;UBERON:0004923!5.74e-09!24;UBERON:0002365!2.81e-08!25;UBERON:0002330!2.81e-08!25;UBERON:0003929!3.74e-08!55;UBERON:0000485!2.67e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-40,31;UBERON:0005409,3.40e-27,47;UBERON:0000344,4.61e-19,15;UBERON:0001242,3.45e-18,13;UBERON:0001262,3.45e-18,13;UBERON:0004786,3.45e-18,13;UBERON:0001007,1.21e-17,116;UBERON:0001555,1.21e-17,116;UBERON:0007026,1.21e-17,116;UBERON:0004119,3.14e-17,118;UBERON:0000925,3.14e-17,118;UBERON:0006595,3.14e-17,118;UBERON:0004921,1.48e-16,114;UBERON:0004923,4.78e-11,24;UBERON:0002108,2.96e-10,4;UBERON:0003350,9.21e-10,9;UBERON:0004808,9.21e-10,9;UBERON:0001277,9.21e-10,9;UBERON:0000331,3.77e-08,3;UBERON:0002116,3.77e-08,3;UBERON:0001204,3.77e-08,3;UBERON:0001168,3.77e-08,3;UBERON:0000485,7.33e-08,11;UBERON:0011216,5.90e-07,194 | |||
|phase1_expression=0,5.58360652222978,1.36499771816861,3.0246421130683,3.00537437967808,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,0.68822784320151,1.72269589234506,3.01533397311352,3.01659725760245,2.09025761402011,2.77233142735924,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,1.07940638327563,0,1.34408066129201,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,3.43785736662608,0,0,0.515469845288373,0.80673409849337,2.2237804384487,2.66315876557583,2.37264530772256,3.12928013975621,2.5133520880027,3.78017296878187,2.33956904542944,2.69645822596266,2.80979464837102,2.38969527905241,0,0,0,0,0,0.0701358198903186,0.379419222745544,0.442830443938806,0.31399745568275,0.493588655687202,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,0,1.11642284300551,1.24815069245824,2.02063102357689,1.79397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Anks4b | |||
}} |
Revision as of 11:37, 14 September 2013
Short description: | p3@Anks4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Anks4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -25bp_to_ENSMUST00000033201, NM_028085, uc009jmj.2_5end |
EntrezGene: | Anks4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.46e-11 | 6 |
gut absorptive cell | 8.46e-11 | 6 |
enterocyte | 8.46e-11 | 6 |
epithelial cell | 4.86e-10 | 25 |
intestinal epithelial cell | 9.21e-10 | 9 |
epithelial cell of alimentary canal | 9.21e-10 | 9 |
columnar/cuboidal epithelial cell | 3.33e-09 | 7 |
M cell of gut | 1.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.50e-40 | 31 |
gastrointestinal system | 3.40e-27 | 47 |
mucosa | 4.61e-19 | 15 |
intestinal mucosa | 3.45e-18 | 13 |
wall of intestine | 3.45e-18 | 13 |
gastrointestinal system mucosa | 3.45e-18 | 13 |
digestive system | 1.21e-17 | 116 |
digestive tract | 1.21e-17 | 116 |
primitive gut | 1.21e-17 | 116 |
endoderm-derived structure | 3.14e-17 | 118 |
endoderm | 3.14e-17 | 118 |
presumptive endoderm | 3.14e-17 | 118 |
subdivision of digestive tract | 1.48e-16 | 114 |
organ component layer | 4.78e-11 | 24 |
small intestine | 2.96e-10 | 4 |
epithelium of mucosa | 9.21e-10 | 9 |
gastrointestinal system epithelium | 9.21e-10 | 9 |
intestinal epithelium | 9.21e-10 | 9 |
ileal mucosa | 3.77e-08 | 3 |
ileum | 3.77e-08 | 3 |
mucosa of small intestine | 3.77e-08 | 3 |
wall of small intestine | 3.77e-08 | 3 |
simple columnar epithelium | 7.33e-08 | 11 |
organ system subdivision | 5.90e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.