FFCP PHASE1:Mm9::chr6:68491613..68491626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=929|UniProt=|association_with_transcript=-25bp_to_ENSMUST00000103326_5end|description=CAGE_peak_1_at_ENSMUST00000103326_5end|id=chr6:68491613..68491626,+|ontology_enrichment_celltype=CL:0000553!5.00e-11!6;CL:0000556!5.00e-11!6;CL:0000050!5.65e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,4.37e-18,6;CL:0000556,4.37e-18,6;CL:0000050,7.99e-12,9;CL:0002027,1.80e-09,3;CL:0002006,1.80e-09,3;CL:0002024,1.80e-09,3;CL:0000839,5.80e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.84e-18!51;UBERON:0000161!4.23e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-12,51;UBERON:0002465,1.80e-09,3;UBERON:0002193,2.90e-09,48;UBERON:0002405,2.90e-09,48;UBERON:0002106,7.04e-08,6;UBERON:0004457,7.04e-08,6;UBERON:0000042,7.04e-08,6;UBERON:0004854,7.04e-08,6;UBERON:0009034,7.04e-08,6;UBERON:0002095,7.04e-08,6;UBERON:0004782,7.04e-08,6;UBERON:0003281,7.04e-08,6;UBERON:0009664,7.04e-08,6;UBERON:0002296,7.04e-08,6;UBERON:0005602,7.04e-08,6;UBERON:0001179,7.04e-08,6;UBERON:0006293,7.04e-08,6;UBERON:0003887,8.22e-07,10;UBERON:0001155,9.20e-07,2;UBERON:0000059,9.20e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9919514253639,25.3094084237282,3.49780939064073,94.4809185247922,31.9476630301371,28.434106670468,0.425216450755349,0,0,3.83981814704176,6.19405058881359,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4761735753903,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,112.379041502873,0.29688427812965,0,0,0,0,0,0,0,1.73519228303894,11.4999371753484,0,0.883366073841574,0.484875253135222,3.72783522436244,0,0,16.3492515333498,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,3.15662783829711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91210208533135,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,2.45882136509518,1.65562047782839,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.709700426041343,0,0,0.164970122972535,5.30980553359851,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.927126510052548,242.124038090557,0,0,1.50694765603753,6.83471138605126,7.77845788902177,0,8.81694149639045,0,0.954670618015114,0,0,0,0,0,0,0,0,0,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0,12.0084225838708,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0.384847366561318,0,0.226730383615211,0,0,0,2.51146472241848,0,1.64836461840539,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p1@ENSMUST00000103326}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=929 | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENSMUST00000103326_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103326_5end | |||
|id=chr6:68491613..68491626,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.00e-11!6;CL:0000556!5.00e-11!6;CL:0000050!5.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.37e-18,6;CL:0000556,4.37e-18,6;CL:0000050,7.99e-12,9;CL:0002027,1.80e-09,3;CL:0002006,1.80e-09,3;CL:0002024,1.80e-09,3;CL:0000839,5.80e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-18!51;UBERON:0000161!4.23e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-12,51;UBERON:0002465,1.80e-09,3;UBERON:0002193,2.90e-09,48;UBERON:0002405,2.90e-09,48;UBERON:0002106,7.04e-08,6;UBERON:0004457,7.04e-08,6;UBERON:0000042,7.04e-08,6;UBERON:0004854,7.04e-08,6;UBERON:0009034,7.04e-08,6;UBERON:0002095,7.04e-08,6;UBERON:0004782,7.04e-08,6;UBERON:0003281,7.04e-08,6;UBERON:0009664,7.04e-08,6;UBERON:0002296,7.04e-08,6;UBERON:0005602,7.04e-08,6;UBERON:0001179,7.04e-08,6;UBERON:0006293,7.04e-08,6;UBERON:0003887,8.22e-07,10;UBERON:0001155,9.20e-07,2;UBERON:0000059,9.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9919514253639,25.3094084237282,3.49780939064073,94.4809185247922,31.9476630301371,28.434106670468,0.425216450755349,0,0,3.83981814704176,6.19405058881359,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4761735753903,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,112.379041502873,0.29688427812965,0,0,0,0,0,0,0,1.73519228303894,11.4999371753484,0,0.883366073841574,0.484875253135222,3.72783522436244,0,0,16.3492515333498,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,3.15662783829711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91210208533135,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,2.45882136509518,1.65562047782839,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.709700426041343,0,0,0.164970122972535,5.30980553359851,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.927126510052548,242.124038090557,0,0,1.50694765603753,6.83471138605126,7.77845788902177,0,8.81694149639045,0,0.954670618015114,0,0,0,0,0,0,0,0,0,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0,12.0084225838708,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0.384847366561318,0,0.226730383615211,0,0,0,2.51146472241848,0,1.64836461840539,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000103326 | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p1@ENSMUST00000103326 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103326_5end |
Coexpression cluster: | MCL_coexpression_mm9:929 |
Association with transcript: | -25bp_to_ENSMUST00000103326_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.37e-18 | 6 |
megakaryocyte | 4.37e-18 | 6 |
megakaryocyte-erythroid progenitor cell | 7.99e-12 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.80e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.80e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.80e-09 | 3 |
myeloid lineage restricted progenitor cell | 5.80e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.87e-12 | 51 |
lymphoid system | 1.80e-09 | 3 |
hemolymphoid system | 2.90e-09 | 48 |
immune system | 2.90e-09 | 48 |
spleen | 7.04e-08 | 6 |
cavity lining | 7.04e-08 | 6 |
serous membrane | 7.04e-08 | 6 |
gastrointestinal system mesentery | 7.04e-08 | 6 |
stomach region | 7.04e-08 | 6 |
mesentery | 7.04e-08 | 6 |
gastrointestinal system serosa | 7.04e-08 | 6 |
mesentery of stomach | 7.04e-08 | 6 |
gut mesentery | 7.04e-08 | 6 |
dorsal mesentery | 7.04e-08 | 6 |
dorsal mesogastrium | 7.04e-08 | 6 |
peritoneal cavity | 7.04e-08 | 6 |
spleen primordium | 7.04e-08 | 6 |
intraembryonic coelom | 8.22e-07 | 10 |
colon | 9.20e-07 | 2 |
large intestine | 9.20e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.