FFCP PHASE1:Hg19::chrX:110507067..110507079,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=827|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1483|TSSclassifier=S|UniProt=F5GWQ6|association_with_transcript=24bp_to_ENST00000541758_5end|coexpression_cluster_id=C533|description=CAGE_peak_6_at_CAPN6_5end|id=chrX:110507067..110507079,-|ontology_enrichment_celltype=CL:0002541!8.13e-26!3;CL:0002537!3.48e-15!5;CL:0000039!6.51e-11!7;CL:0000586!6.51e-11!7|ontology_enrichment_celltype_v019=CL:0002541;6.88e-75;3!CL:0000349;7.31e-33;19!CL:0002577;1.60e-09;3!CL:0000083;1.86e-07;4|ontology_enrichment_celltype_v019_2=CL:0002541,6.07e-75,3;CL:0000349,6.62e-33,19;CL:0002577,1.41e-09,3;CL:0000083,2.04e-07,4|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1|ontology_enrichment_disease=DOID:1799!1.43e-09!1;DOID:10165!1.43e-09!1;DOID:1798!1.43e-09!1|ontology_enrichment_disease_v019=DOID:1799;8.64e-26;1!DOID:10165;8.64e-26;1!DOID:1798;8.64e-26;1!DOID:1793;1.86e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,1.26e-25,1;DOID:10165,1.26e-25,1;DOID:1798,1.26e-25,1;DOID:1793,2.04e-07,4|ontology_enrichment_uberon=UBERON:0005631!1.46e-36!14;UBERON:0000158!1.46e-36!14;UBERON:0003124!1.13e-29!7;UBERON:0000476!8.13e-26!3;UBERON:0000920!8.13e-26!3;UBERON:0000478!6.54e-21!24;UBERON:0000305!5.30e-11!7;UBERON:0004871!1.09e-09!8;UBERON:0001736!3.00e-09!1;UBERON:0006298!3.00e-09!1;UBERON:0001987!3.13e-09!4;UBERON:0004340!3.13e-09!4;UBERON:0001000!3.53e-09!1;UBERON:0005352!3.53e-09!1;UBERON:0004923!3.52e-08!57|ontology_enrichment_uberon_v019=UBERON:0003124;6.88e-75;3!UBERON:0000920;6.88e-75;3!UBERON:0005631;3.51e-40;10!UBERON:0000158;3.51e-40;10!UBERON:0000478;3.60e-37;24!UBERON:0001987;1.84e-25;4|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.11e-88,7;UBERON:0000920,6.07e-75,3;UBERON:0005631,1.83e-63,14;UBERON:0000158,1.83e-63,14;UBERON:0000478,3.38e-37,24;UBERON:0001987,1.62e-25,4;UBERON:0004340,1.62e-25,4;UBERON:0004923,1.12e-13,66|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,5.04839957415486,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,0.0897576444097721,0.760531603454056,3.82801391678303,12.9152606696626,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p6@CAPN6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |||
|TSSclassifier=S | |||
|UniProt=F5GWQ6 | |||
|association_with_transcript=24bp_to_ENST00000541758_5end | |||
|coexpression_cluster_id=C533 | |||
|description=CAGE_peak_6_at_CAPN6_5end | |||
|id=chrX:110507067..110507079,- | |||
|ontology_enrichment_celltype=CL:0002541!8.13e-26!3;CL:0002537!3.48e-15!5;CL:0000039!6.51e-11!7;CL:0000586!6.51e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.88e-75;3!CL:0000349;7.31e-33;19!CL:0002577;1.60e-09;3!CL:0000083;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.07e-75,3;CL:0000349,6.62e-33,19;CL:0002577,1.41e-09,3;CL:0000083,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1 | |||
|ontology_enrichment_disease=DOID:1799!1.43e-09!1;DOID:10165!1.43e-09!1;DOID:1798!1.43e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;8.64e-26;1!DOID:10165;8.64e-26;1!DOID:1798;8.64e-26;1!DOID:1793;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.26e-25,1;DOID:10165,1.26e-25,1;DOID:1798,1.26e-25,1;DOID:1793,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.46e-36!14;UBERON:0000158!1.46e-36!14;UBERON:0003124!1.13e-29!7;UBERON:0000476!8.13e-26!3;UBERON:0000920!8.13e-26!3;UBERON:0000478!6.54e-21!24;UBERON:0000305!5.30e-11!7;UBERON:0004871!1.09e-09!8;UBERON:0001736!3.00e-09!1;UBERON:0006298!3.00e-09!1;UBERON:0001987!3.13e-09!4;UBERON:0004340!3.13e-09!4;UBERON:0001000!3.53e-09!1;UBERON:0005352!3.53e-09!1;UBERON:0004923!3.52e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.88e-75;3!UBERON:0000920;6.88e-75;3!UBERON:0005631;3.51e-40;10!UBERON:0000158;3.51e-40;10!UBERON:0000478;3.60e-37;24!UBERON:0001987;1.84e-25;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.11e-88,7;UBERON:0000920,6.07e-75,3;UBERON:0005631,1.83e-63,14;UBERON:0000158,1.83e-63,14;UBERON:0000478,3.38e-37,24;UBERON:0001987,1.62e-25,4;UBERON:0004340,1.62e-25,4;UBERON:0004923,1.12e-13,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,5.04839957415486,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,0.0897576444097721,0.760531603454056,3.82801391678303,12.9152606696626,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CAPN6 | |||
}} |
Revision as of 10:26, 14 September 2013
Short description: | p6@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CAPN6_5end |
Coexpression cluster: | C533_chorionic_amniotic_pancreatic_placenta_choriocarcinoma_Placental_mesothelioma |
Association with transcript: | 24bp_to_ENST00000541758_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | F5GWQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.07e-75 | 3 |
extraembryonic cell | 6.62e-33 | 19 |
placental epithelial cell | 1.41e-09 | 3 |
epithelial cell of pancreas | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 5.11e-88 | 7 |
egg chorion | 6.07e-75 | 3 |
extraembryonic membrane | 1.83e-63 | 14 |
membranous layer | 1.83e-63 | 14 |
extraembryonic structure | 3.38e-37 | 24 |
placenta | 1.62e-25 | 4 |
allantois | 1.62e-25 | 4 |
organ component layer | 1.12e-13 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.26e-25 | 1 |
endocrine pancreas cancer | 1.26e-25 | 1 |
pancreatic endocrine carcinoma | 1.26e-25 | 1 |
pancreatic cancer | 2.04e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.