FFCP PHASE1:Mm9::chr6:54423148..54423168,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=61|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:54423148..54423168,-|id=chr6:54423148..54423168,-|ontology_enrichment_celltype=CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.09e-17!59;UBERON:0000160!6.48e-17!43;UBERON:0000344!2.48e-13!15;UBERON:0001242!1.64e-11!13;UBERON:0000060!1.64e-11!13;UBERON:0001262!1.64e-11!13;UBERON:0004786!1.64e-11!13;UBERON:0004923!2.07e-08!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0000485!6.09e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.93e-37,31;UBERON:0005409,2.91e-28,47;UBERON:0000344,8.89e-14,15;UBERON:0001242,8.92e-11,13;UBERON:0001262,8.92e-11,13;UBERON:0004786,8.92e-11,13;UBERON:0002108,8.64e-09,4;UBERON:0001007,9.06e-09,116;UBERON:0001555,9.06e-09,116;UBERON:0007026,9.06e-09,116;UBERON:0004119,1.70e-08,118;UBERON:0000925,1.70e-08,118;UBERON:0006595,1.70e-08,118;UBERON:0004923,1.08e-07,24;UBERON:0004921,2.09e-07,114;UBERON:0000331,8.11e-07,3;UBERON:0002116,8.11e-07,3;UBERON:0001204,8.11e-07,3;UBERON:0001168,8.11e-07,3|phase1_expression=0,7.67745896806594,5.0049916332849,0.90739263392049,2.00358291978539,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.91971964335605,4.5881856213434,8.03924749761028,6.03066794622705,3.23206849028834,6.46079626151671,8.82105454159758,4.6563407237614,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0,0,0,0,8.26046957459495,7.40461586657924,0,0,2.57734922644187,11.4959609035305,15.7888411129858,18.2616601068057,5.21981967698963,25.8577358916697,25.6361912976275,22.0841683965677,24.37051088989,8.98819408654222,6.26800344636613,6.77080329064848,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0.42366414172764,0,0.32977250588296,0,0,0,0,16.6144076879015,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,1.40406943068342,0.209088296014469,1.31017538247707,0.269728692769641,0.247960367176008,0,10.3691978633434,0,0,0,0,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.62799699626633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.666740183404846,0,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,0.936415074698824,1.08842759088278,1.09127391015665,1.42888107384922,1.27472758539341,0.964546102318525,2.47251540481984,0.588795680537589,1.02860775715625,1.06485483695602,0.953744759789284,0.581385666529314,1.41164070622996,1.01537529470012,0.548783918618318,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.886540341380071,0.409231043169689,0.929621047115796,0.771626443924566,0,0.935726433781634,0.429742108096597,0,0,0|short_description=p@chr6:54423148..54423168,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:54423148..54423168,- | |||
|id=chr6:54423148..54423168,- | |||
|ontology_enrichment_celltype=CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.09e-17!59;UBERON:0000160!6.48e-17!43;UBERON:0000344!2.48e-13!15;UBERON:0001242!1.64e-11!13;UBERON:0000060!1.64e-11!13;UBERON:0001262!1.64e-11!13;UBERON:0004786!1.64e-11!13;UBERON:0004923!2.07e-08!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0000485!6.09e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.93e-37,31;UBERON:0005409,2.91e-28,47;UBERON:0000344,8.89e-14,15;UBERON:0001242,8.92e-11,13;UBERON:0001262,8.92e-11,13;UBERON:0004786,8.92e-11,13;UBERON:0002108,8.64e-09,4;UBERON:0001007,9.06e-09,116;UBERON:0001555,9.06e-09,116;UBERON:0007026,9.06e-09,116;UBERON:0004119,1.70e-08,118;UBERON:0000925,1.70e-08,118;UBERON:0006595,1.70e-08,118;UBERON:0004923,1.08e-07,24;UBERON:0004921,2.09e-07,114;UBERON:0000331,8.11e-07,3;UBERON:0002116,8.11e-07,3;UBERON:0001204,8.11e-07,3;UBERON:0001168,8.11e-07,3 | |||
|phase1_expression=0,7.67745896806594,5.0049916332849,0.90739263392049,2.00358291978539,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.91971964335605,4.5881856213434,8.03924749761028,6.03066794622705,3.23206849028834,6.46079626151671,8.82105454159758,4.6563407237614,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0,0,0,0,8.26046957459495,7.40461586657924,0,0,2.57734922644187,11.4959609035305,15.7888411129858,18.2616601068057,5.21981967698963,25.8577358916697,25.6361912976275,22.0841683965677,24.37051088989,8.98819408654222,6.26800344636613,6.77080329064848,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0.42366414172764,0,0.32977250588296,0,0,0,0,16.6144076879015,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,1.40406943068342,0.209088296014469,1.31017538247707,0.269728692769641,0.247960367176008,0,10.3691978633434,0,0,0,0,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.62799699626633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.666740183404846,0,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,0.936415074698824,1.08842759088278,1.09127391015665,1.42888107384922,1.27472758539341,0.964546102318525,2.47251540481984,0.588795680537589,1.02860775715625,1.06485483695602,0.953744759789284,0.581385666529314,1.41164070622996,1.01537529470012,0.548783918618318,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.886540341380071,0.409231043169689,0.929621047115796,0.771626443924566,0,0.935726433781634,0.429742108096597,0,0,0 | |||
|short_description=p@chr6:54423148..54423168,- | |||
}} |
Revision as of 10:20, 14 September 2013
Short description: | p@chr6:54423148..54423168, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:54423148..54423168, - |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.93e-37 | 31 |
gastrointestinal system | 2.91e-28 | 47 |
mucosa | 8.89e-14 | 15 |
intestinal mucosa | 8.92e-11 | 13 |
wall of intestine | 8.92e-11 | 13 |
gastrointestinal system mucosa | 8.92e-11 | 13 |
small intestine | 8.64e-09 | 4 |
digestive system | 9.06e-09 | 116 |
digestive tract | 9.06e-09 | 116 |
primitive gut | 9.06e-09 | 116 |
endoderm-derived structure | 1.70e-08 | 118 |
endoderm | 1.70e-08 | 118 |
presumptive endoderm | 1.70e-08 | 118 |
organ component layer | 1.08e-07 | 24 |
subdivision of digestive tract | 2.09e-07 | 114 |
ileal mucosa | 8.11e-07 | 3 |
ileum | 8.11e-07 | 3 |
mucosa of small intestine | 8.11e-07 | 3 |
wall of small intestine | 8.11e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.