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FFCP PHASE1:Mm9::chr6:29998062..29998078,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18181|HGNC=|MCL_coexpression_id=2396|UniProt=E9Q7X0,G3XA39,Q9WU00|association_with_transcript=0bp_to_ENSMUST00000115200,ENSMUST00000115204,ENSMUST00000115209_5end|description=CAGE_peak_2_at_Nrf1_5end|id=chr6:29998062..29998078,+|ontology_enrichment_celltype=CL:0000542!1.36e-07!13;CL:0000051!1.36e-07!13;CL:0000838!3.94e-07!12;CL:0000084!8.61e-07!11;CL:0000827!8.61e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,1.36e-07,13;CL:0000051,1.36e-07,13;CL:0000838,3.94e-07,12;CL:0000084,8.60e-07,11;CL:0000827,8.60e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!6.34e-10!42;UBERON:0000065!7.20e-10!41;UBERON:0004177!2.99e-09!29;UBERON:0003408!1.11e-07!24;UBERON:0002370!1.15e-07!23;UBERON:0000974!1.15e-07!23;UBERON:0004807!1.15e-07!23;UBERON:0005058!1.15e-07!23;UBERON:0003351!1.15e-07!23;UBERON:0009113!1.15e-07!23;UBERON:0003295!1.15e-07!23;UBERON:0009722!1.15e-07!23;UBERON:0005562!1.15e-07!23;UBERON:0007690!1.15e-07!23;UBERON:0006562!4.40e-07!24;UBERON:0001557!4.40e-07!24;UBERON:0001042!4.40e-07!24;UBERON:0008814!4.40e-07!24;UBERON:0009145!4.40e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.31e-12,43;UBERON:0007811,1.66e-10,36;UBERON:0001004,5.62e-10,42;UBERON:0000065,6.38e-10,41;UBERON:0004177,2.61e-09,29;UBERON:0005057,2.61e-09,29;UBERON:0001048,3.03e-08,134;UBERON:0003408,9.76e-08,24;UBERON:0002370,1.01e-07,23;UBERON:0000974,1.01e-07,23;UBERON:0004807,1.01e-07,23;UBERON:0005058,1.01e-07,23;UBERON:0003351,1.01e-07,23;UBERON:0009113,1.01e-07,23;UBERON:0003295,1.01e-07,23;UBERON:0009722,1.01e-07,23;UBERON:0005562,1.01e-07,23;UBERON:0007690,1.01e-07,23;UBERON:0000077,3.63e-07,35;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24;UBERON:0000072,9.27e-07,27|phase1_expression=3.20297694209588,2.79180326111489,4.09499315450582,1.81478526784098,4.00716583957078,2.18243053485457,2.80335168714631,10.3298658753261,15.7683368809867,17.0867104215055,5.82141091966717,5.50427897067821,9.0736386863539,8.13009742496676,2.33176833270964,5.87178275430495,3.49780939064073,6.46697438984387,6.85572168028694,5.51706547337439,2.72138528483423,8.93618560807968,8.35839325244593,3.51983330145495,2.06468352960453,1.14846392823004,1.29228598847722,2.80112602491656,1.90023419456374,1.26015064879965,1.77384408524244,2.54012269383853,1.23012957516914,15.8481681015439,1.73310971850765,2.1610503896604,2.85837098767317,3.76678467663217,5.4693474116666,3.66466620781659,5.88231488031014,4.78131839470912,2.91306211818692,1.38486499773135,1.11514624341466,0.550640256485045,0.782391344348039,3.70642765846759,1.97717564461025,0.972149495371417,2.2397827460058,1.43752564364972,6.71130424230945,11.6057942721815,9.07453257684653,1.54355661621568,1.14613375975503,0.515672092277442,3.64169629547276,10.5798195854407,3.1691570175309,1.0165335962074,1.77858959222228,2.2497492932035,0,0.7104801149461,2.39680088414724,3.07374644257244,5.18448061542388,6.21027316325777,4.41682418837902,3.42781181284564,3.09215957332259,7.7169203505421,6.99671938433125,2.75765635983006,1.10115880999389,1.78762273319263,1.0752457327937,3.69281605644543,4.02545631850602,2.08365348222704,1.3959149950069,1.12552522006336,1.22238598221448,2.06240009831567,2.13557521198654,2.79599168737951,2.72614295999463,3.40072020480535,4.34796733052517,2.58127163094416,5.439770669662,1.07940638327563,2.59910566979068,0.896053774194671,2.52799956237153,0.852151612890289,1.03914401841148,1.7666978725517,3.09855523508697,1.28326477414318,0,0,1.73192832808971,5.06719730950197,5.56076889516262,1.94112595522402,5.69663344023778,4.30482203287992,6.59244241711316,4.56698217468212,1.38369298353635,2.71300752994721,4.70354828542819,2.38766523526383,2.22475470960936,3.61498392299779,6.19227386364912,2.75003644910596,3.3126227769059,4.84875253135222,1.86391761218122,3.22058876712702,2.30391377494801,2.55457055208591,6.35020159881377,4.79922184794726,3.17675567682662,1.79748767285787,3.20250421973039,5.15182843662744,5.04090528557602,2.81287003063364,2.90903262383384,2.75810147215188,3.46253837091075,3.4833951770826,2.27450482590307,6.52369753248069,9.23855145035196,10.3455946995063,7.56260945182467,5.72678307775717,7.96027040070536,10.6334387836425,10.6819965998091,9.05461797586555,12.7185115830377,9.26619792822314,8.62160508403349,7.01426343768239,5.28289773528636,4.52727816478817,2.88094990971121,4.97585667046233,5.61770549850588,3.86021860672073,6.25159698670304,7.04227626620706,8.67746421930056,4.14142741360334,3.55117103377815,3.73852040320067,4.31947916084659,2.79040733700489,2.14618721119695,4.2035523252181,3.29119699826961,2.95501435342371,2.10778904819225,2.92399974850665,2.19550115291051,1.8788898626452,2.52347938276953,2.36680608472354,1.65209391491899,0.528901133327089,8.31824177087412,6.27039014023184,6.05677068213839,2.21851877085677,2.00140239460383,2.09248188723815,2.37264530772256,3.45867804920423,3.01602250560323,2.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|EntrezGene=18181
|HGNC=
|MCL_coexpression_id=2396
|UniProt=E9Q7X0,G3XA39,Q9WU00
|association_with_transcript=0bp_to_ENSMUST00000115200,ENSMUST00000115204,ENSMUST00000115209_5end
|description=CAGE_peak_2_at_Nrf1_5end
|id=chr6:29998062..29998078,+
|ontology_enrichment_celltype=CL:0000542!1.36e-07!13;CL:0000051!1.36e-07!13;CL:0000838!3.94e-07!12;CL:0000084!8.61e-07!11;CL:0000827!8.61e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000542,1.36e-07,13;CL:0000051,1.36e-07,13;CL:0000838,3.94e-07,12;CL:0000084,8.60e-07,11;CL:0000827,8.60e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!6.34e-10!42;UBERON:0000065!7.20e-10!41;UBERON:0004177!2.99e-09!29;UBERON:0003408!1.11e-07!24;UBERON:0002370!1.15e-07!23;UBERON:0000974!1.15e-07!23;UBERON:0004807!1.15e-07!23;UBERON:0005058!1.15e-07!23;UBERON:0003351!1.15e-07!23;UBERON:0009113!1.15e-07!23;UBERON:0003295!1.15e-07!23;UBERON:0009722!1.15e-07!23;UBERON:0005562!1.15e-07!23;UBERON:0007690!1.15e-07!23;UBERON:0006562!4.40e-07!24;UBERON:0001557!4.40e-07!24;UBERON:0001042!4.40e-07!24;UBERON:0008814!4.40e-07!24;UBERON:0009145!4.40e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.31e-12,43;UBERON:0007811,1.66e-10,36;UBERON:0001004,5.62e-10,42;UBERON:0000065,6.38e-10,41;UBERON:0004177,2.61e-09,29;UBERON:0005057,2.61e-09,29;UBERON:0001048,3.03e-08,134;UBERON:0003408,9.76e-08,24;UBERON:0002370,1.01e-07,23;UBERON:0000974,1.01e-07,23;UBERON:0004807,1.01e-07,23;UBERON:0005058,1.01e-07,23;UBERON:0003351,1.01e-07,23;UBERON:0009113,1.01e-07,23;UBERON:0003295,1.01e-07,23;UBERON:0009722,1.01e-07,23;UBERON:0005562,1.01e-07,23;UBERON:0007690,1.01e-07,23;UBERON:0000077,3.63e-07,35;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24;UBERON:0000072,9.27e-07,27
|phase1_expression=3.20297694209588,2.79180326111489,4.09499315450582,1.81478526784098,4.00716583957078,2.18243053485457,2.80335168714631,10.3298658753261,15.7683368809867,17.0867104215055,5.82141091966717,5.50427897067821,9.0736386863539,8.13009742496676,2.33176833270964,5.87178275430495,3.49780939064073,6.46697438984387,6.85572168028694,5.51706547337439,2.72138528483423,8.93618560807968,8.35839325244593,3.51983330145495,2.06468352960453,1.14846392823004,1.29228598847722,2.80112602491656,1.90023419456374,1.26015064879965,1.77384408524244,2.54012269383853,1.23012957516914,15.8481681015439,1.73310971850765,2.1610503896604,2.85837098767317,3.76678467663217,5.4693474116666,3.66466620781659,5.88231488031014,4.78131839470912,2.91306211818692,1.38486499773135,1.11514624341466,0.550640256485045,0.782391344348039,3.70642765846759,1.97717564461025,0.972149495371417,2.2397827460058,1.43752564364972,6.71130424230945,11.6057942721815,9.07453257684653,1.54355661621568,1.14613375975503,0.515672092277442,3.64169629547276,10.5798195854407,3.1691570175309,1.0165335962074,1.77858959222228,2.2497492932035,0,0.7104801149461,2.39680088414724,3.07374644257244,5.18448061542388,6.21027316325777,4.41682418837902,3.42781181284564,3.09215957332259,7.7169203505421,6.99671938433125,2.75765635983006,1.10115880999389,1.78762273319263,1.0752457327937,3.69281605644543,4.02545631850602,2.08365348222704,1.3959149950069,1.12552522006336,1.22238598221448,2.06240009831567,2.13557521198654,2.79599168737951,2.72614295999463,3.40072020480535,4.34796733052517,2.58127163094416,5.439770669662,1.07940638327563,2.59910566979068,0.896053774194671,2.52799956237153,0.852151612890289,1.03914401841148,1.7666978725517,3.09855523508697,1.28326477414318,0,0,1.73192832808971,5.06719730950197,5.56076889516262,1.94112595522402,5.69663344023778,4.30482203287992,6.59244241711316,4.56698217468212,1.38369298353635,2.71300752994721,4.70354828542819,2.38766523526383,2.22475470960936,3.61498392299779,6.19227386364912,2.75003644910596,3.3126227769059,4.84875253135222,1.86391761218122,3.22058876712702,2.30391377494801,2.55457055208591,6.35020159881377,4.79922184794726,3.17675567682662,1.79748767285787,3.20250421973039,5.15182843662744,5.04090528557602,2.81287003063364,2.90903262383384,2.75810147215188,3.46253837091075,3.4833951770826,2.27450482590307,6.52369753248069,9.23855145035196,10.3455946995063,7.56260945182467,5.72678307775717,7.96027040070536,10.6334387836425,10.6819965998091,9.05461797586555,12.7185115830377,9.26619792822314,8.62160508403349,7.01426343768239,5.28289773528636,4.52727816478817,2.88094990971121,4.97585667046233,5.61770549850588,3.86021860672073,6.25159698670304,7.04227626620706,8.67746421930056,4.14142741360334,3.55117103377815,3.73852040320067,4.31947916084659,2.79040733700489,2.14618721119695,4.2035523252181,3.29119699826961,2.95501435342371,2.10778904819225,2.92399974850665,2.19550115291051,1.8788898626452,2.52347938276953,2.36680608472354,1.65209391491899,0.528901133327089,8.31824177087412,6.27039014023184,6.05677068213839,2.21851877085677,2.00140239460383,2.09248188723815,2.37264530772256,3.45867804920423,3.01602250560323,2.18852119245266,2.14460495831032,0.898819408654221,1.72910439899755,2.58883655230677,9.10405924574792,9.82537208443668,7.88954149711563,6.31319116320474,7.95205197387266,4.97964321221262,3.22506339333712,2.95220295959204,3.29697328466887,3.33172342588861,1.48226313543574,4.50481785433454,5.50365186316968,4.94696647246678,4.26006254915856,4.3411888755435,3.31013607315846,2.01387296215567,4.21551589615092,3.84385978463314,2.87536413054709,3.34926852901653,3.43241440426017,2.02063102357689,2.33216637578486,1.92977408545347,4.80358294433172,6.253216588426,9.28900365719548,7.63852885988347,7.97946844180907,8.37531287209079,6.9032655856944,4.48807390072937,5.04432461139811,4.20782910332672,5.26200736569707,4.26044618260919,4.48980952851328,4.62876987460837,0,1.08781136763742,0.491764273019036,3.31124095565679,3.05046120976805,2.34423373184406,3.27869890753351,2.01976741763498,4.41711507182759,5.85658116444958,2.15423397732799,3.34556317133573,4.01037613348309,3.39691836946599,5.26253912177363,3.79932615284705,5.53402889125133,1.92792789853084,4.5420827266646,4.09550888434687,3.58351310577867,4.78413356620353,2.65490276679926,3.64170954232472,5.13950046840077,1.50884063804718,1.77181135728464,2.15204603560749,3.35956781118687,3.27180356529755,2.13898427030833,1.8962205476149,1.05418608574999,2.06271086496374,2.38307724027652,9.90336017172206,9.18446654857557,4.28674070063185,5.67488747655275,4.63758925765383,2.96188237083818,1.8267896946876,4.4587624532105,1.69465656691056,1.98475558249466,3.79238381765404,4.68246837418126,4.70440814439616,5.01363844813173,3.44695889464629,3.20628920292836,3.70850604021019,6.4930934703184,4.33412422722767,6.48180845793991,6.40452753815949,6.83471138605126,5.49067615695654,3.39956859987711,6.71766971153558,6.90999869022119,0,5.06137589729817,5.08298667817122,4.21220829205025,3.97267762427491,5.24070152990826,3.10187996685088,2.23164330458407,3.66458318777641,1.94422459937689,4.34937519160848,0.56369293868419,4.03694674318743,5.29467169462712,5.05573089694524,4.1331143512874,4.89972763923257,4.81164678447591,6.51021924219751,6.39642000996836,3.62376181239009,1.72818003754719,12.324433704499,3.64905387522296,7.18976700153791,7.14564526377873,9.30938817470904,12.715606706001,11.7791540529569,10.3382669022204,11.9140410938814,12.04067545149,16.1321896218945,13.9364769457846,13.5658696712865,16.2458894032381,2.49403421976732,7.76950836809226,9.240527230776,2.85403847818933,3.09103350451505,2.43987218086537,4.2124873581471,2.78678892802786,2.00628841614145,2.25900737046827,0.920650473014354,3.43737308063638,2.06223818812425,0.685082519770642,2.2661816921691,2.70009000092722,1.80128481289688,2.71885445390523,2.5888015587591,7.16132698330819,9.17757208822371,5.9756762013947,4.37592090722929,3.98265008993166,1.83843508450014,4.00044110042907,3.09052585858341,3.85103051510178,4.04315538822076,2.28131369901216,4.33840585187975,3.27745276144588,3.71345883948242,1.95280594449085,3.33405583898152,3.24476112645595,2.50781986602817,3.29668720642645,4.12156976376312,2.40008476669791,3.72699192934609,2.86123427936785,4.21504608233753,4.79957840118186,3.63842813934209,3.29270351170991,1.8414879800649,2.71608227691724,1.68342681497322,3.79632057997357,3.84167481264697,4.09231043169689,3.09873682371932,3.08650577569826,5.74564329257276,3.27504251823572,3.65280791882107,3.44318997723918,3.30887128679273,4.86922454802885
|short_description=p2@Nrf1
}}

Revision as of 09:34, 14 September 2013

Short description:p2@Nrf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrf1_5end
Coexpression cluster:MCL_coexpression_mm9:2396
Association with transcript: 0bp_to_ENSMUST00000115200, ENSMUST00000115204, ENSMUST00000115209_5end
EntrezGene:Nrf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.07
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C69.24
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E212.72
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F89.83
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G74.98
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F89.29
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A68.38
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C79.18
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H34.70
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B74.81
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D96.40
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I27.19
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C19.31
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C710.34
thymus, neonate N06.CNhs11197.681-26C411.91
thymus, neonate N07.CNhs11211.713-19D312.04
thymus, neonate N10.CNhs11194.748-24E416.13
thymus, neonate N20.CNhs11186.820-7A213.94
thymus, neonate N25.CNhs11125.1362-25G713.57
thymus, neonate N30.CNhs11132.1393-42G216.25
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte1.36e-0713
common lymphoid progenitor1.36e-0713
lymphoid lineage restricted progenitor cell3.94e-0712
T cell8.60e-0711
pro-T cell8.60e-0711







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