FFCP PHASE1:Mm9::chr6:129189844..129189851,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=467|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:129189844..129189851,-|id=chr6:129189844..129189851,-|ontology_enrichment_celltype=CL:0000624!2.85e-29!8;CL:0000791!5.32e-26!9;CL:0000789!5.32e-26!9;CL:0002420!5.32e-26!9;CL:0002419!5.32e-26!9;CL:0000790!5.32e-26!9;CL:0000084!3.09e-21!11;CL:0000827!3.09e-21!11;CL:0000838!1.90e-19!12;CL:0000542!6.23e-18!13;CL:0000051!6.23e-18!13;CL:0000893!7.87e-18!6;CL:0002489!7.87e-18!6;CL:0000898!7.87e-18!6;CL:0000809!7.87e-18!6;CL:0000810!7.87e-18!6;CL:0000895!7.87e-18!6;CL:0000808!7.87e-18!6;CL:0000894!7.87e-18!6;CL:0000806!7.87e-18!6;CL:0000807!7.87e-18!6;CL:0000805!7.87e-18!6;CL:0002425!7.87e-18!6;CL:0002436!7.87e-18!6;CL:0002427!7.87e-18!6;CL:0002428!7.87e-18!6;CL:0002429!7.87e-18!6;CL:0002433!7.87e-18!6;CL:0002431!7.87e-18!6;CL:0002432!7.87e-18!6;CL:0000738!1.20e-13!17;CL:0002087!1.20e-13!17;CL:0002031!3.36e-12!25;CL:0000988!2.09e-09!32;CL:0002032!2.09e-09!32;CL:0000037!2.09e-09!32;CL:0000566!2.09e-09!32;CL:0000837!2.09e-09!32;CL:0000815!4.65e-08!1;CL:0000792!4.65e-08!1|ontology_enrichment_celltype_v019_2=CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000893,4.33e-33,6;CL:0002489,4.33e-33,6;CL:0000898,4.33e-33,6;CL:0000809,4.33e-33,6;CL:0000810,4.33e-33,6;CL:0000895,4.33e-33,6;CL:0000808,4.33e-33,6;CL:0000894,4.33e-33,6;CL:0000806,4.33e-33,6;CL:0000807,4.33e-33,6;CL:0000805,4.33e-33,6;CL:0002425,4.33e-33,6;CL:0002436,4.33e-33,6;CL:0002427,4.33e-33,6;CL:0002428,4.33e-33,6;CL:0002429,4.33e-33,6;CL:0002433,4.33e-33,6;CL:0002431,4.33e-33,6;CL:0002432,4.33e-33,6;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.42e-17!48;UBERON:0004177!9.99e-17!29;UBERON:0002370!4.21e-13!23;UBERON:0000974!4.21e-13!23;UBERON:0004807!4.21e-13!23;UBERON:0005058!4.21e-13!23;UBERON:0003351!4.21e-13!23;UBERON:0009113!4.21e-13!23;UBERON:0003295!4.21e-13!23;UBERON:0009722!4.21e-13!23;UBERON:0005562!4.21e-13!23;UBERON:0007690!4.21e-13!23;UBERON:0002390!6.77e-13!45;UBERON:0003061!6.77e-13!45;UBERON:0006562!1.56e-12!24;UBERON:0003408!1.56e-12!24;UBERON:0001557!1.56e-12!24;UBERON:0001042!1.56e-12!24;UBERON:0008814!1.56e-12!24;UBERON:0009145!1.56e-12!24;UBERON:0002405!1.22e-11!70;UBERON:0000072!4.43e-11!27;UBERON:0002465!2.39e-09!3;UBERON:0005057!4.18e-09!51;UBERON:0000063!2.05e-08!35;UBERON:0000029!1.14e-07!1;UBERON:0001097!1.14e-07!1;UBERON:0003968!1.14e-07!1;UBERON:0008785!1.14e-07!1;UBERON:0001467!1.14e-07!1;UBERON:0001421!1.14e-07!1;UBERON:0003199!1.53e-07!1;UBERON:0003081!2.04e-07!88;UBERON:0000065!4.29e-07!41;UBERON:0001004!6.55e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.33e-09,23;UBERON:0000974,2.33e-09,23;UBERON:0004807,2.33e-09,23;UBERON:0005058,2.33e-09,23;UBERON:0003351,2.33e-09,23;UBERON:0009113,2.33e-09,23;UBERON:0003295,2.33e-09,23;UBERON:0009722,2.33e-09,23;UBERON:0005562,2.33e-09,23;UBERON:0007690,2.33e-09,23;UBERON:0006562,5.26e-09,24;UBERON:0003408,5.26e-09,24;UBERON:0001557,5.26e-09,24;UBERON:0001042,5.26e-09,24;UBERON:0008814,5.26e-09,24;UBERON:0009145,5.26e-09,24;UBERON:0002384,2.15e-08,46;UBERON:0000072,4.25e-08,27;UBERON:0004177,1.35e-07,29;UBERON:0005057,1.35e-07,29|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,1.68946466582,0.936258105287974,1.71217968225505,1.43589886191606,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:129189844..129189851,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=467 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:129189844..129189851,- | |||
|id=chr6:129189844..129189851,- | |||
|ontology_enrichment_celltype=CL:0000624!2.85e-29!8;CL:0000791!5.32e-26!9;CL:0000789!5.32e-26!9;CL:0002420!5.32e-26!9;CL:0002419!5.32e-26!9;CL:0000790!5.32e-26!9;CL:0000084!3.09e-21!11;CL:0000827!3.09e-21!11;CL:0000838!1.90e-19!12;CL:0000542!6.23e-18!13;CL:0000051!6.23e-18!13;CL:0000893!7.87e-18!6;CL:0002489!7.87e-18!6;CL:0000898!7.87e-18!6;CL:0000809!7.87e-18!6;CL:0000810!7.87e-18!6;CL:0000895!7.87e-18!6;CL:0000808!7.87e-18!6;CL:0000894!7.87e-18!6;CL:0000806!7.87e-18!6;CL:0000807!7.87e-18!6;CL:0000805!7.87e-18!6;CL:0002425!7.87e-18!6;CL:0002436!7.87e-18!6;CL:0002427!7.87e-18!6;CL:0002428!7.87e-18!6;CL:0002429!7.87e-18!6;CL:0002433!7.87e-18!6;CL:0002431!7.87e-18!6;CL:0002432!7.87e-18!6;CL:0000738!1.20e-13!17;CL:0002087!1.20e-13!17;CL:0002031!3.36e-12!25;CL:0000988!2.09e-09!32;CL:0002032!2.09e-09!32;CL:0000037!2.09e-09!32;CL:0000566!2.09e-09!32;CL:0000837!2.09e-09!32;CL:0000815!4.65e-08!1;CL:0000792!4.65e-08!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000893,4.33e-33,6;CL:0002489,4.33e-33,6;CL:0000898,4.33e-33,6;CL:0000809,4.33e-33,6;CL:0000810,4.33e-33,6;CL:0000895,4.33e-33,6;CL:0000808,4.33e-33,6;CL:0000894,4.33e-33,6;CL:0000806,4.33e-33,6;CL:0000807,4.33e-33,6;CL:0000805,4.33e-33,6;CL:0002425,4.33e-33,6;CL:0002436,4.33e-33,6;CL:0002427,4.33e-33,6;CL:0002428,4.33e-33,6;CL:0002429,4.33e-33,6;CL:0002433,4.33e-33,6;CL:0002431,4.33e-33,6;CL:0002432,4.33e-33,6;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.42e-17!48;UBERON:0004177!9.99e-17!29;UBERON:0002370!4.21e-13!23;UBERON:0000974!4.21e-13!23;UBERON:0004807!4.21e-13!23;UBERON:0005058!4.21e-13!23;UBERON:0003351!4.21e-13!23;UBERON:0009113!4.21e-13!23;UBERON:0003295!4.21e-13!23;UBERON:0009722!4.21e-13!23;UBERON:0005562!4.21e-13!23;UBERON:0007690!4.21e-13!23;UBERON:0002390!6.77e-13!45;UBERON:0003061!6.77e-13!45;UBERON:0006562!1.56e-12!24;UBERON:0003408!1.56e-12!24;UBERON:0001557!1.56e-12!24;UBERON:0001042!1.56e-12!24;UBERON:0008814!1.56e-12!24;UBERON:0009145!1.56e-12!24;UBERON:0002405!1.22e-11!70;UBERON:0000072!4.43e-11!27;UBERON:0002465!2.39e-09!3;UBERON:0005057!4.18e-09!51;UBERON:0000063!2.05e-08!35;UBERON:0000029!1.14e-07!1;UBERON:0001097!1.14e-07!1;UBERON:0003968!1.14e-07!1;UBERON:0008785!1.14e-07!1;UBERON:0001467!1.14e-07!1;UBERON:0001421!1.14e-07!1;UBERON:0003199!1.53e-07!1;UBERON:0003081!2.04e-07!88;UBERON:0000065!4.29e-07!41;UBERON:0001004!6.55e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.33e-09,23;UBERON:0000974,2.33e-09,23;UBERON:0004807,2.33e-09,23;UBERON:0005058,2.33e-09,23;UBERON:0003351,2.33e-09,23;UBERON:0009113,2.33e-09,23;UBERON:0003295,2.33e-09,23;UBERON:0009722,2.33e-09,23;UBERON:0005562,2.33e-09,23;UBERON:0007690,2.33e-09,23;UBERON:0006562,5.26e-09,24;UBERON:0003408,5.26e-09,24;UBERON:0001557,5.26e-09,24;UBERON:0001042,5.26e-09,24;UBERON:0008814,5.26e-09,24;UBERON:0009145,5.26e-09,24;UBERON:0002384,2.15e-08,46;UBERON:0000072,4.25e-08,27;UBERON:0004177,1.35e-07,29;UBERON:0005057,1.35e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,1.68946466582,0.936258105287974,1.71217968225505,1.43589886191606,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:129189844..129189851,- | |||
}} |
Revision as of 09:05, 14 September 2013
Short description: | p@chr6:129189844..129189851, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129189844..129189851, - |
Coexpression cluster: | MCL_coexpression_mm9:467 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.33e-09 | 23 |
neck | 2.33e-09 | 23 |
respiratory system epithelium | 2.33e-09 | 23 |
hemolymphoid system gland | 2.33e-09 | 23 |
pharyngeal epithelium | 2.33e-09 | 23 |
thymic region | 2.33e-09 | 23 |
pharyngeal gland | 2.33e-09 | 23 |
entire pharyngeal arch endoderm | 2.33e-09 | 23 |
thymus primordium | 2.33e-09 | 23 |
early pharyngeal endoderm | 2.33e-09 | 23 |
pharynx | 5.26e-09 | 24 |
gland of gut | 5.26e-09 | 24 |
upper respiratory tract | 5.26e-09 | 24 |
chordate pharynx | 5.26e-09 | 24 |
pharyngeal arch system | 5.26e-09 | 24 |
pharyngeal region of foregut | 5.26e-09 | 24 |
connective tissue | 2.15e-08 | 46 |
segment of respiratory tract | 4.25e-08 | 27 |
hemopoietic organ | 1.35e-07 | 29 |
immune organ | 1.35e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.