FFCP PHASE1:Mm9::chr6:114198155..114198168,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114198155..114198168,+|id=chr6:114198155..114198168,+|ontology_enrichment_celltype=CL:0000117!2.68e-15!23;CL:0000337!2.68e-15!23;CL:0000540!4.30e-10!33;CL:0000047!4.30e-10!33;CL:0000031!4.30e-10!33;CL:0000404!4.30e-10!33;CL:0000393!9.78e-08!39;CL:0000211!9.78e-08!39;CL:0002319!2.42e-07!43;CL:0000221!4.67e-07!44;CL:0000133!4.67e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-25,23;CL:0000337,2.33e-25,23;CL:0000540,4.45e-17,33;CL:0000047,4.45e-17,33;CL:0000031,4.45e-17,33;CL:0000404,4.45e-17,33;CL:0000393,3.84e-14,39;CL:0000211,3.84e-14,39;CL:0002614,5.99e-14,3;CL:0002612,8.90e-14,3;CL:0002610,2.37e-13,3;CL:0002319,1.22e-12,43;CL:0000221,2.63e-12,44;CL:0000133,2.63e-12,44;CL:0002611,3.32e-10,2;CL:0002321,5.60e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.00e-26!73;UBERON:0005743!1.00e-26!73;UBERON:0001049!4.25e-26!52;UBERON:0005068!4.25e-26!52;UBERON:0006241!4.25e-26!52;UBERON:0007135!4.25e-26!52;UBERON:0000073!1.19e-25!75;UBERON:0001016!1.19e-25!75;UBERON:0000033!3.95e-24!63;UBERON:0000955!1.91e-23!50;UBERON:0006238!1.91e-23!50;UBERON:0002616!2.84e-22!49;UBERON:0002346!3.76e-22!71;UBERON:0003075!3.76e-22!71;UBERON:0007284!3.76e-22!71;UBERON:0004121!1.79e-20!102;UBERON:0000924!1.79e-20!102;UBERON:0006601!1.79e-20!102;UBERON:0003056!1.05e-17!49;UBERON:0002020!4.02e-16!34;UBERON:0003080!5.29e-16!40;UBERON:0007811!1.95e-15!86;UBERON:0002780!6.78e-15!39;UBERON:0001890!6.78e-15!39;UBERON:0006240!6.78e-15!39;UBERON:0000153!4.89e-14!94;UBERON:0003076!2.38e-11!12;UBERON:0003057!2.38e-11!12;UBERON:0002791!1.55e-10!29;UBERON:0003528!1.55e-10!29;UBERON:0001893!1.55e-10!29;UBERON:0002240!1.03e-09!6;UBERON:0005174!1.03e-09!6;UBERON:0001137!1.03e-09!6;UBERON:0002298!1.30e-09!6;UBERON:0001948!1.74e-08!5;UBERON:0002315!1.74e-08!5;UBERON:0002950!4.83e-07!4;UBERON:0001891!4.83e-07!4;UBERON:0009616!4.83e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.40e-26,6;UBERON:0005174,5.40e-26,6;UBERON:0001137,5.40e-26,6;UBERON:0000073,4.08e-23,54;UBERON:0001948,2.59e-22,5;UBERON:0002315,2.59e-22,5;UBERON:0003076,3.53e-22,12;UBERON:0003057,3.53e-22,12;UBERON:0001017,1.24e-20,73;UBERON:0001016,5.28e-20,75;UBERON:0001049,1.26e-18,52;UBERON:0005068,1.26e-18,52;UBERON:0006241,1.26e-18,52;UBERON:0007135,1.26e-18,52;UBERON:0002950,5.36e-18,4;UBERON:0001891,5.36e-18,4;UBERON:0009616,5.36e-18,4;UBERON:0010286,5.36e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.24e-16,64;UBERON:0003075,1.24e-16,64;UBERON:0007284,1.24e-16,64;UBERON:0010371,3.10e-14,73;UBERON:0002038,5.99e-14,3;UBERON:0009663,5.99e-14,3;UBERON:0009661,5.99e-14,3;UBERON:0000125,5.99e-14,3;UBERON:0002308,5.99e-14,3;UBERON:0002257,8.90e-14,3;UBERON:0004684,2.37e-13,3;UBERON:0002275,2.37e-13,3;UBERON:0002420,3.09e-13,8;UBERON:0007245,3.09e-13,8;UBERON:0010009,3.09e-13,8;UBERON:0010011,3.09e-13,8;UBERON:0000454,3.09e-13,8;UBERON:0002020,2.59e-11,34;UBERON:0010314,1.05e-10,92;UBERON:0002256,3.32e-10,2;UBERON:0001896,2.42e-09,2;UBERON:0002298,2.42e-09,2;UBERON:0005290,2.42e-09,2;UBERON:0010096,2.42e-09,2;UBERON:0000955,3.47e-09,47;UBERON:0006238,3.47e-09,47;UBERON:0002616,9.92e-08,46;UBERON:0000489,4.51e-07,21;UBERON:0000025,5.28e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,9.42648248532552,6.62605622854841,0,0.479227355091182,0,1.10115880999389,7.2781782708557,3.22573719838111,0,1.18933936683133,0,6.42120897703176,6.19038871034848,5.50073691996516,10.606629077052,6.26435395516053,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,5.99162557619291,1.83000241127451,0.753926112677186,0.173824320192276,0.255715457330331,4.57133698031032,3.0825839982874,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr6:114198155..114198168,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:114198155..114198168,+ | |||
|id=chr6:114198155..114198168,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.68e-15!23;CL:0000337!2.68e-15!23;CL:0000540!4.30e-10!33;CL:0000047!4.30e-10!33;CL:0000031!4.30e-10!33;CL:0000404!4.30e-10!33;CL:0000393!9.78e-08!39;CL:0000211!9.78e-08!39;CL:0002319!2.42e-07!43;CL:0000221!4.67e-07!44;CL:0000133!4.67e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-25,23;CL:0000337,2.33e-25,23;CL:0000540,4.45e-17,33;CL:0000047,4.45e-17,33;CL:0000031,4.45e-17,33;CL:0000404,4.45e-17,33;CL:0000393,3.84e-14,39;CL:0000211,3.84e-14,39;CL:0002614,5.99e-14,3;CL:0002612,8.90e-14,3;CL:0002610,2.37e-13,3;CL:0002319,1.22e-12,43;CL:0000221,2.63e-12,44;CL:0000133,2.63e-12,44;CL:0002611,3.32e-10,2;CL:0002321,5.60e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.00e-26!73;UBERON:0005743!1.00e-26!73;UBERON:0001049!4.25e-26!52;UBERON:0005068!4.25e-26!52;UBERON:0006241!4.25e-26!52;UBERON:0007135!4.25e-26!52;UBERON:0000073!1.19e-25!75;UBERON:0001016!1.19e-25!75;UBERON:0000033!3.95e-24!63;UBERON:0000955!1.91e-23!50;UBERON:0006238!1.91e-23!50;UBERON:0002616!2.84e-22!49;UBERON:0002346!3.76e-22!71;UBERON:0003075!3.76e-22!71;UBERON:0007284!3.76e-22!71;UBERON:0004121!1.79e-20!102;UBERON:0000924!1.79e-20!102;UBERON:0006601!1.79e-20!102;UBERON:0003056!1.05e-17!49;UBERON:0002020!4.02e-16!34;UBERON:0003080!5.29e-16!40;UBERON:0007811!1.95e-15!86;UBERON:0002780!6.78e-15!39;UBERON:0001890!6.78e-15!39;UBERON:0006240!6.78e-15!39;UBERON:0000153!4.89e-14!94;UBERON:0003076!2.38e-11!12;UBERON:0003057!2.38e-11!12;UBERON:0002791!1.55e-10!29;UBERON:0003528!1.55e-10!29;UBERON:0001893!1.55e-10!29;UBERON:0002240!1.03e-09!6;UBERON:0005174!1.03e-09!6;UBERON:0001137!1.03e-09!6;UBERON:0002298!1.30e-09!6;UBERON:0001948!1.74e-08!5;UBERON:0002315!1.74e-08!5;UBERON:0002950!4.83e-07!4;UBERON:0001891!4.83e-07!4;UBERON:0009616!4.83e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.40e-26,6;UBERON:0005174,5.40e-26,6;UBERON:0001137,5.40e-26,6;UBERON:0000073,4.08e-23,54;UBERON:0001948,2.59e-22,5;UBERON:0002315,2.59e-22,5;UBERON:0003076,3.53e-22,12;UBERON:0003057,3.53e-22,12;UBERON:0001017,1.24e-20,73;UBERON:0001016,5.28e-20,75;UBERON:0001049,1.26e-18,52;UBERON:0005068,1.26e-18,52;UBERON:0006241,1.26e-18,52;UBERON:0007135,1.26e-18,52;UBERON:0002950,5.36e-18,4;UBERON:0001891,5.36e-18,4;UBERON:0009616,5.36e-18,4;UBERON:0010286,5.36e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.24e-16,64;UBERON:0003075,1.24e-16,64;UBERON:0007284,1.24e-16,64;UBERON:0010371,3.10e-14,73;UBERON:0002038,5.99e-14,3;UBERON:0009663,5.99e-14,3;UBERON:0009661,5.99e-14,3;UBERON:0000125,5.99e-14,3;UBERON:0002308,5.99e-14,3;UBERON:0002257,8.90e-14,3;UBERON:0004684,2.37e-13,3;UBERON:0002275,2.37e-13,3;UBERON:0002420,3.09e-13,8;UBERON:0007245,3.09e-13,8;UBERON:0010009,3.09e-13,8;UBERON:0010011,3.09e-13,8;UBERON:0000454,3.09e-13,8;UBERON:0002020,2.59e-11,34;UBERON:0010314,1.05e-10,92;UBERON:0002256,3.32e-10,2;UBERON:0001896,2.42e-09,2;UBERON:0002298,2.42e-09,2;UBERON:0005290,2.42e-09,2;UBERON:0010096,2.42e-09,2;UBERON:0000955,3.47e-09,47;UBERON:0006238,3.47e-09,47;UBERON:0002616,9.92e-08,46;UBERON:0000489,4.51e-07,21;UBERON:0000025,5.28e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,9.42648248532552,6.62605622854841,0,0.479227355091182,0,1.10115880999389,7.2781782708557,3.22573719838111,0,1.18933936683133,0,6.42120897703176,6.19038871034848,5.50073691996516,10.606629077052,6.26435395516053,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,5.99162557619291,1.83000241127451,0.753926112677186,0.173824320192276,0.255715457330331,4.57133698031032,3.0825839982874,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr6:114198155..114198168,+ | |||
}} |
Revision as of 08:34, 14 September 2013
Short description: | p@chr6:114198155..114198168, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114198155..114198168, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.33e-25 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-25 | 23 |
neuron | 4.45e-17 | 33 |
neuronal stem cell | 4.45e-17 | 33 |
neuroblast | 4.45e-17 | 33 |
electrically signaling cell | 4.45e-17 | 33 |
electrically responsive cell | 3.84e-14 | 39 |
electrically active cell | 3.84e-14 | 39 |
neuron of the substantia nigra | 5.99e-14 | 3 |
neuron of the ventral spinal cord | 8.90e-14 | 3 |
raphe nuclei neuron | 2.37e-13 | 3 |
neural cell | 1.22e-12 | 43 |
ectodermal cell | 2.63e-12 | 44 |
neurectodermal cell | 2.63e-12 | 44 |
neuron of the dorsal spinal cord | 3.32e-10 | 2 |
embryonic cell | 5.60e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.