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FFCP PHASE1:Mm9::chr6:108778502..108778511,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=192193|HGNC=|MCL_coexpression_id=1583|UniProt=Q925U4,Q6ZQG3|association_with_transcript=-123bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end|description=CAGE_peak_6_at_Edem1_5end|id=chr6:108778502..108778511,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.61e-09!23;UBERON:0000974!1.61e-09!23;UBERON:0004807!1.61e-09!23;UBERON:0005058!1.61e-09!23;UBERON:0003351!1.61e-09!23;UBERON:0009113!1.61e-09!23;UBERON:0003295!1.61e-09!23;UBERON:0009722!1.61e-09!23;UBERON:0005562!1.61e-09!23;UBERON:0007690!1.61e-09!23;UBERON:0006562!8.84e-09!24;UBERON:0003408!8.84e-09!24;UBERON:0001557!8.84e-09!24;UBERON:0001042!8.84e-09!24;UBERON:0008814!8.84e-09!24;UBERON:0009145!8.84e-09!24;UBERON:0001045!9.92e-09!13;UBERON:0004177!3.24e-08!29;UBERON:0001264!5.44e-08!12;UBERON:0003922!5.44e-08!12;UBERON:0002114!5.44e-08!12;UBERON:0003923!5.44e-08!12;UBERON:0003924!5.44e-08!12;UBERON:0003921!5.44e-08!12;UBERON:0000949!1.20e-07!72;UBERON:0000072!6.20e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.92e-31,12;UBERON:0000949,5.98e-22,72;UBERON:0002370,2.32e-20,23;UBERON:0000974,2.32e-20,23;UBERON:0004807,2.32e-20,23;UBERON:0005058,2.32e-20,23;UBERON:0003351,2.32e-20,23;UBERON:0009113,2.32e-20,23;UBERON:0003295,2.32e-20,23;UBERON:0009722,2.32e-20,23;UBERON:0005562,2.32e-20,23;UBERON:0007690,2.32e-20,23;UBERON:0006562,1.95e-19,24;UBERON:0003408,1.95e-19,24;UBERON:0001557,1.95e-19,24;UBERON:0001042,1.95e-19,24;UBERON:0008814,1.95e-19,24;UBERON:0009145,1.95e-19,24;UBERON:0002075,2.60e-19,19;UBERON:0000072,4.51e-17,27;UBERON:0004177,9.10e-16,29;UBERON:0005057,9.10e-16,29;UBERON:0000077,9.57e-13,35;UBERON:0007811,2.44e-12,36;UBERON:0000065,1.32e-10,41;UBERON:0001004,2.61e-10,42;UBERON:0000153,5.02e-10,43;UBERON:0002390,1.70e-09,45;UBERON:0003061,1.70e-09,45;UBERON:0002323,3.64e-09,37;UBERON:0004458,3.64e-09,37;UBERON:0003886,6.97e-09,38;UBERON:0002193,8.71e-09,48;UBERON:0002405,8.71e-09,48;UBERON:0002553,1.29e-08,39;UBERON:0003929,1.98e-07,55|phase1_expression=0,0.697950815278722,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0.516493293766305,0.84473233291,0.468129052643987,0,0.0797721589953364,0.342401459862411,0.699363219351979,0,0.404950534779652,0,0,0.137114433605739,0,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.570070258369122,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.284743361598206,0,0.227178579999552,0.151143120213571,0,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.662524555381181,0,1.86391761218122,0,0,0.510914110417183,0.239630249011841,0,0.381210681219194,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0,0,0.2562274405697,0,0,0,0,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0.327869890753351,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,6.63725691699814,0,1.81394134178851,1.50884063804718,2.65771703592696,1.53717573971964,0.258428293168221,1.09060118843252,1.78248689192361,1.8962205476149,1.05418608574999,3.09406629744561,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0,0,0,0,0.164140899745061,0,0.370850604021019,0.683483523191411,0,0.185194527369712,0,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0.324016022465404,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.629156066554265,0,0.288030006257865,3.47612232690996,0.405450430580328,0.308132871494482,0.51968329191118,1.25318686967237,2.38417625737518,2.76449533895928,3.83992770653901,2.62512769865184,2.51482461961499,3.62974266492626,3.80085734885034,4.9068039236568,5.02570679380746,0,0.221985953374065,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p6@Edem1}}
|EntrezGene=192193
|HGNC=
|MCL_coexpression_id=1583
|UniProt=Q925U4,Q6ZQG3
|association_with_transcript=-123bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end
|description=CAGE_peak_6_at_Edem1_5end
|id=chr6:108778502..108778511,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!1.61e-09!23;UBERON:0000974!1.61e-09!23;UBERON:0004807!1.61e-09!23;UBERON:0005058!1.61e-09!23;UBERON:0003351!1.61e-09!23;UBERON:0009113!1.61e-09!23;UBERON:0003295!1.61e-09!23;UBERON:0009722!1.61e-09!23;UBERON:0005562!1.61e-09!23;UBERON:0007690!1.61e-09!23;UBERON:0006562!8.84e-09!24;UBERON:0003408!8.84e-09!24;UBERON:0001557!8.84e-09!24;UBERON:0001042!8.84e-09!24;UBERON:0008814!8.84e-09!24;UBERON:0009145!8.84e-09!24;UBERON:0001045!9.92e-09!13;UBERON:0004177!3.24e-08!29;UBERON:0001264!5.44e-08!12;UBERON:0003922!5.44e-08!12;UBERON:0002114!5.44e-08!12;UBERON:0003923!5.44e-08!12;UBERON:0003924!5.44e-08!12;UBERON:0003921!5.44e-08!12;UBERON:0000949!1.20e-07!72;UBERON:0000072!6.20e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.92e-31,12;UBERON:0000949,5.98e-22,72;UBERON:0002370,2.32e-20,23;UBERON:0000974,2.32e-20,23;UBERON:0004807,2.32e-20,23;UBERON:0005058,2.32e-20,23;UBERON:0003351,2.32e-20,23;UBERON:0009113,2.32e-20,23;UBERON:0003295,2.32e-20,23;UBERON:0009722,2.32e-20,23;UBERON:0005562,2.32e-20,23;UBERON:0007690,2.32e-20,23;UBERON:0006562,1.95e-19,24;UBERON:0003408,1.95e-19,24;UBERON:0001557,1.95e-19,24;UBERON:0001042,1.95e-19,24;UBERON:0008814,1.95e-19,24;UBERON:0009145,1.95e-19,24;UBERON:0002075,2.60e-19,19;UBERON:0000072,4.51e-17,27;UBERON:0004177,9.10e-16,29;UBERON:0005057,9.10e-16,29;UBERON:0000077,9.57e-13,35;UBERON:0007811,2.44e-12,36;UBERON:0000065,1.32e-10,41;UBERON:0001004,2.61e-10,42;UBERON:0000153,5.02e-10,43;UBERON:0002390,1.70e-09,45;UBERON:0003061,1.70e-09,45;UBERON:0002323,3.64e-09,37;UBERON:0004458,3.64e-09,37;UBERON:0003886,6.97e-09,38;UBERON:0002193,8.71e-09,48;UBERON:0002405,8.71e-09,48;UBERON:0002553,1.29e-08,39;UBERON:0003929,1.98e-07,55
|phase1_expression=0,0.697950815278722,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0.516493293766305,0.84473233291,0.468129052643987,0,0.0797721589953364,0.342401459862411,0.699363219351979,0,0.404950534779652,0,0,0.137114433605739,0,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.570070258369122,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.284743361598206,0,0.227178579999552,0.151143120213571,0,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.662524555381181,0,1.86391761218122,0,0,0.510914110417183,0.239630249011841,0,0.381210681219194,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0,0,0.2562274405697,0,0,0,0,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0.327869890753351,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,6.63725691699814,0,1.81394134178851,1.50884063804718,2.65771703592696,1.53717573971964,0.258428293168221,1.09060118843252,1.78248689192361,1.8962205476149,1.05418608574999,3.09406629744561,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0,0,0,0,0.164140899745061,0,0.370850604021019,0.683483523191411,0,0.185194527369712,0,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0.324016022465404,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.629156066554265,0,0.288030006257865,3.47612232690996,0.405450430580328,0.308132871494482,0.51968329191118,1.25318686967237,2.38417625737518,2.76449533895928,3.83992770653901,2.62512769865184,2.51482461961499,3.62974266492626,3.80085734885034,4.9068039236568,5.02570679380746,0,0.221985953374065,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0.220591419119515,0
|short_description=p6@Edem1
}}

Revision as of 08:28, 14 September 2013

Short description:p6@Edem1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Edem1_5end
Coexpression cluster:MCL_coexpression_mm9:1583
Association with transcript: -123bp_to_ENSMUST00000089162, ENSMUST00000169217, NM_138677, uc009ddq.1, uc009ddr.1_5end
EntrezGene:Edem1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p6@Edem1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pancreas1.92e-3112
endocrine system5.98e-2272
thymus2.32e-2023
neck2.32e-2023
respiratory system epithelium2.32e-2023
hemolymphoid system gland2.32e-2023
pharyngeal epithelium2.32e-2023
thymic region2.32e-2023
pharyngeal gland2.32e-2023
entire pharyngeal arch endoderm2.32e-2023
thymus primordium2.32e-2023
early pharyngeal endoderm2.32e-2023
pharynx1.95e-1924
gland of gut1.95e-1924
upper respiratory tract1.95e-1924
chordate pharynx1.95e-1924
pharyngeal arch system1.95e-1924
pharyngeal region of foregut1.95e-1924
viscus2.60e-1919
segment of respiratory tract4.51e-1727
hemopoietic organ9.10e-1629
immune organ9.10e-1629
mixed endoderm/mesoderm-derived structure9.57e-1335
craniocervical region2.44e-1236
respiratory tract1.32e-1041
respiratory system2.61e-1042
anterior region of body5.02e-1043
hematopoietic system1.70e-0945
blood island1.70e-0945
body cavity3.64e-0937
body cavity or lining3.64e-0937
body cavity precursor6.97e-0938
hemolymphoid system8.71e-0948
immune system8.71e-0948
anatomical cavity1.29e-0839
gut epithelium1.98e-0755







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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