FFCP PHASE1:Mm9::chr5:89022703..89022738,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=351|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:89022703..89022738,+|id=chr5:89022703..89022738,+|ontology_enrichment_celltype=CL:0002563!1.87e-07!9;CL:0002251!1.87e-07!9;CL:0000066!7.20e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-10,25;CL:0002563,7.73e-10,9;CL:0002251,7.73e-10,9;CL:0000223,5.64e-09,20;CL:0000239,4.15e-08,6;CL:0000677,4.15e-08,6;CL:0000584,4.15e-08,6;CL:0000075,9.08e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!2.33e-17!23;UBERON:0009856!2.33e-17!23;UBERON:0002107!9.71e-17!22;UBERON:0007499!9.71e-17!22;UBERON:0006925!9.71e-17!22;UBERON:0009497!9.71e-17!22;UBERON:0000015!9.71e-17!22;UBERON:0002423!9.71e-17!22;UBERON:0006235!9.71e-17!22;UBERON:0008835!9.71e-17!22;UBERON:0003894!9.71e-17!22;UBERON:0004161!9.71e-17!22;UBERON:0008836!9.71e-17!22;UBERON:0005172!4.36e-15!49;UBERON:0005173!4.36e-15!49;UBERON:0002417!4.36e-15!49;UBERON:0000916!4.36e-15!49;UBERON:0000160!4.01e-14!43;UBERON:0002365!1.36e-13!25;UBERON:0002330!1.36e-13!25;UBERON:0005409!2.10e-12!59;UBERON:0000344!1.09e-11!15;UBERON:0004119!6.54e-11!130;UBERON:0000925!6.54e-11!130;UBERON:0006595!6.54e-11!130;UBERON:0001007!7.51e-11!128;UBERON:0001555!7.51e-11!128;UBERON:0007026!7.51e-11!128;UBERON:0001242!3.01e-10!13;UBERON:0000060!3.01e-10!13;UBERON:0001262!3.01e-10!13;UBERON:0004786!3.01e-10!13;UBERON:0004921!7.05e-10!126;UBERON:0004185!7.05e-10!126;UBERON:0005256!3.97e-08!47;UBERON:0003929!4.15e-08!55;UBERON:0009569!8.67e-08!66;UBERON:0004923!1.13e-07!24;UBERON:0003350!1.87e-07!9;UBERON:0004808!1.87e-07!9;UBERON:0001277!1.87e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.07e-27,31;UBERON:0009854,9.63e-24,23;UBERON:0009856,9.63e-24,23;UBERON:0002107,7.16e-23,22;UBERON:0007499,7.16e-23,22;UBERON:0006925,7.16e-23,22;UBERON:0009497,7.16e-23,22;UBERON:0000015,7.16e-23,22;UBERON:0002423,7.16e-23,22;UBERON:0006235,7.16e-23,22;UBERON:0008835,7.16e-23,22;UBERON:0003894,7.16e-23,22;UBERON:0004161,7.16e-23,22;UBERON:0008836,7.16e-23,22;UBERON:0002365,3.10e-19,25;UBERON:0002330,3.10e-19,25;UBERON:0001007,9.27e-19,116;UBERON:0001555,9.27e-19,116;UBERON:0007026,9.27e-19,116;UBERON:0004119,3.66e-18,118;UBERON:0000925,3.66e-18,118;UBERON:0006595,3.66e-18,118;UBERON:0004921,3.42e-17,114;UBERON:0005409,3.77e-17,47;UBERON:0000344,8.95e-16,15;UBERON:0001242,9.46e-14,13;UBERON:0001262,9.46e-14,13;UBERON:0004786,9.46e-14,13;UBERON:0003929,1.57e-13,55;UBERON:0005172,8.68e-12,49;UBERON:0005173,8.68e-12,49;UBERON:0002417,8.68e-12,49;UBERON:0000916,8.68e-12,49;UBERON:0003350,7.73e-10,9;UBERON:0004808,7.73e-10,9;UBERON:0001277,7.73e-10,9;UBERON:0000490,9.85e-10,66;UBERON:0004923,2.19e-09,24;UBERON:0005911,6.33e-09,69;UBERON:0003104,6.60e-08,61;UBERON:0009142,6.60e-08,61;UBERON:0005256,1.10e-07,45;UBERON:0000485,1.22e-07,11;UBERON:0003914,4.23e-07,47;UBERON:0009569,9.52e-07,66|phase1_expression=0,16.40184415905,7.27998783023258,38.4129548359674,30.0537437967808,3.3575854382378,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,4.81759490241057,6.89078356938024,7.32295393470427,9.26526300549323,7.22088993934221,6.30075324399827,1.55211357458713,0,0,0,1.73310971850765,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,2.58127163094416,2.03991400112325,13.4925797909454,14.9448576012964,12.5447528387254,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,2.47194967734374,0.722996784599558,0,0,0,0,3.72783522436244,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,6.73413938836717,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0,0,0,24.1205711578173,15.6025834331491,0,0.232236671860439,1.54640953586512,3.63030344322017,6.0042071838115,5.1360919050391,7.11793592316767,4.77626968699632,5.52937459360593,5.76973768919337,4.09424582950152,4.49409704327111,7.99710784536369,10.1562049359727,0.189667900953082,0,0,0.814605311381257,1.55161989734101,1.40271639780637,2.08680572510049,3.69025369949005,4.08196692387575,2.46794327843601,6.52195779591728,1.83529616287703,1.76903095601883,3.37293168577281,3.44862206360455,5.30589751455317,5.0925170356284,5.4662266115654,4.37765112292595,5.21666685057355,15.814502718009,15.2577788544086,9.98520553966594,12.3763650194085,8.61107584905178,12.5435315554475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,1.80899805217755,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,8.45294426226567,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.972048067396211,0.418176592028937,0.87345025498471,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=351 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:89022703..89022738,+ | |||
|id=chr5:89022703..89022738,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.87e-07!9;CL:0002251!1.87e-07!9;CL:0000066!7.20e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-10,25;CL:0002563,7.73e-10,9;CL:0002251,7.73e-10,9;CL:0000223,5.64e-09,20;CL:0000239,4.15e-08,6;CL:0000677,4.15e-08,6;CL:0000584,4.15e-08,6;CL:0000075,9.08e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.33e-17!23;UBERON:0009856!2.33e-17!23;UBERON:0002107!9.71e-17!22;UBERON:0007499!9.71e-17!22;UBERON:0006925!9.71e-17!22;UBERON:0009497!9.71e-17!22;UBERON:0000015!9.71e-17!22;UBERON:0002423!9.71e-17!22;UBERON:0006235!9.71e-17!22;UBERON:0008835!9.71e-17!22;UBERON:0003894!9.71e-17!22;UBERON:0004161!9.71e-17!22;UBERON:0008836!9.71e-17!22;UBERON:0005172!4.36e-15!49;UBERON:0005173!4.36e-15!49;UBERON:0002417!4.36e-15!49;UBERON:0000916!4.36e-15!49;UBERON:0000160!4.01e-14!43;UBERON:0002365!1.36e-13!25;UBERON:0002330!1.36e-13!25;UBERON:0005409!2.10e-12!59;UBERON:0000344!1.09e-11!15;UBERON:0004119!6.54e-11!130;UBERON:0000925!6.54e-11!130;UBERON:0006595!6.54e-11!130;UBERON:0001007!7.51e-11!128;UBERON:0001555!7.51e-11!128;UBERON:0007026!7.51e-11!128;UBERON:0001242!3.01e-10!13;UBERON:0000060!3.01e-10!13;UBERON:0001262!3.01e-10!13;UBERON:0004786!3.01e-10!13;UBERON:0004921!7.05e-10!126;UBERON:0004185!7.05e-10!126;UBERON:0005256!3.97e-08!47;UBERON:0003929!4.15e-08!55;UBERON:0009569!8.67e-08!66;UBERON:0004923!1.13e-07!24;UBERON:0003350!1.87e-07!9;UBERON:0004808!1.87e-07!9;UBERON:0001277!1.87e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.07e-27,31;UBERON:0009854,9.63e-24,23;UBERON:0009856,9.63e-24,23;UBERON:0002107,7.16e-23,22;UBERON:0007499,7.16e-23,22;UBERON:0006925,7.16e-23,22;UBERON:0009497,7.16e-23,22;UBERON:0000015,7.16e-23,22;UBERON:0002423,7.16e-23,22;UBERON:0006235,7.16e-23,22;UBERON:0008835,7.16e-23,22;UBERON:0003894,7.16e-23,22;UBERON:0004161,7.16e-23,22;UBERON:0008836,7.16e-23,22;UBERON:0002365,3.10e-19,25;UBERON:0002330,3.10e-19,25;UBERON:0001007,9.27e-19,116;UBERON:0001555,9.27e-19,116;UBERON:0007026,9.27e-19,116;UBERON:0004119,3.66e-18,118;UBERON:0000925,3.66e-18,118;UBERON:0006595,3.66e-18,118;UBERON:0004921,3.42e-17,114;UBERON:0005409,3.77e-17,47;UBERON:0000344,8.95e-16,15;UBERON:0001242,9.46e-14,13;UBERON:0001262,9.46e-14,13;UBERON:0004786,9.46e-14,13;UBERON:0003929,1.57e-13,55;UBERON:0005172,8.68e-12,49;UBERON:0005173,8.68e-12,49;UBERON:0002417,8.68e-12,49;UBERON:0000916,8.68e-12,49;UBERON:0003350,7.73e-10,9;UBERON:0004808,7.73e-10,9;UBERON:0001277,7.73e-10,9;UBERON:0000490,9.85e-10,66;UBERON:0004923,2.19e-09,24;UBERON:0005911,6.33e-09,69;UBERON:0003104,6.60e-08,61;UBERON:0009142,6.60e-08,61;UBERON:0005256,1.10e-07,45;UBERON:0000485,1.22e-07,11;UBERON:0003914,4.23e-07,47;UBERON:0009569,9.52e-07,66 | |||
|phase1_expression=0,16.40184415905,7.27998783023258,38.4129548359674,30.0537437967808,3.3575854382378,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,4.81759490241057,6.89078356938024,7.32295393470427,9.26526300549323,7.22088993934221,6.30075324399827,1.55211357458713,0,0,0,1.73310971850765,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,2.58127163094416,2.03991400112325,13.4925797909454,14.9448576012964,12.5447528387254,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,2.47194967734374,0.722996784599558,0,0,0,0,3.72783522436244,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,6.73413938836717,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0,0,0,24.1205711578173,15.6025834331491,0,0.232236671860439,1.54640953586512,3.63030344322017,6.0042071838115,5.1360919050391,7.11793592316767,4.77626968699632,5.52937459360593,5.76973768919337,4.09424582950152,4.49409704327111,7.99710784536369,10.1562049359727,0.189667900953082,0,0,0.814605311381257,1.55161989734101,1.40271639780637,2.08680572510049,3.69025369949005,4.08196692387575,2.46794327843601,6.52195779591728,1.83529616287703,1.76903095601883,3.37293168577281,3.44862206360455,5.30589751455317,5.0925170356284,5.4662266115654,4.37765112292595,5.21666685057355,15.814502718009,15.2577788544086,9.98520553966594,12.3763650194085,8.61107584905178,12.5435315554475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,1.80899805217755,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,8.45294426226567,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.972048067396211,0.418176592028937,0.87345025498471,0,1.40510874733071,0.26175594198403,1.8146096260851,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0,0.44449345560323,1.03017528619447,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,1.12369808963859,0.704276676453562,1.37845125493472,0.476293691283074,0.695305955669133,0.38581844092741,0,2.50238164228475,1.71434626192708,1.59728225543404,0.953744759789284,1.0174249164263,1.2234219453993,1.26921911837515,0.548783918618318,1.57841826862706,1.22223702461276,0,1.18635018124174,0.788035859004508,0.818462086339379,0.154936841185966,0.578719832943424,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr5:89022703..89022738,+ | |||
}} |
Revision as of 08:12, 14 September 2013
Short description: | p@chr5:89022703..89022738, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:89022703..89022738, + |
Coexpression cluster: | MCL_coexpression_mm9:351 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.78e-10 | 25 |
intestinal epithelial cell | 7.73e-10 | 9 |
epithelial cell of alimentary canal | 7.73e-10 | 9 |
endodermal cell | 5.64e-09 | 20 |
brush border epithelial cell | 4.15e-08 | 6 |
gut absorptive cell | 4.15e-08 | 6 |
enterocyte | 4.15e-08 | 6 |
columnar/cuboidal epithelial cell | 9.08e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.