FFCP PHASE1:Hg19::chr9:134145974..134145994,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=286336|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25465|TSSclassifier=S|UniProt=|association_with_transcript=-64bp_to_ENST00000464831_5end|description=CAGE_peak_8_at_FAM78A_5end|id=chr9:134145974..134145994,-|ontology_enrichment_celltype=CL:0000542!1.09e-39!53;CL:0000051!1.09e-39!53;CL:0000838!6.57e-39!52;CL:0002032!3.92e-37!165;CL:0000837!3.92e-37!165;CL:0000037!5.91e-37!172;CL:0000566!5.91e-37!172;CL:0000988!2.39e-36!182;CL:0002087!7.19e-35!119;CL:0000738!1.61e-29!140;CL:0002031!6.21e-29!124;CL:0000084!9.37e-21!25;CL:0000827!9.37e-21!25;CL:0000945!3.79e-20!24;CL:0000826!3.79e-20!24;CL:0000791!1.98e-17!18;CL:0000789!1.98e-17!18;CL:0002420!1.98e-17!18;CL:0002419!1.98e-17!18;CL:0000790!1.98e-17!18;CL:0000236!5.51e-17!14;CL:0000625!1.83e-11!11;CL:0000763!1.92e-08!112;CL:0000049!1.92e-08!112;CL:0002393!8.31e-08!9;CL:0002397!8.31e-08!9|ontology_enrichment_celltype_v019=CL:0000236;2.59e-34;13!CL:0000542;9.09e-25;53!CL:0000084;6.01e-24;25!CL:0000791;4.80e-19;18!CL:0000789;4.80e-19;18!CL:0002419;4.80e-19;18!CL:0000945;1.07e-17;24!CL:0000625;3.21e-10;11!CL:0000815;5.55e-10;2!CL:0000792;5.55e-10;2!CL:0002677;5.55e-10;2!CL:0000624;2.73e-07;6!CL:0002087;4.86e-07;104!CL:0000898;6.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-38,52;CL:0000542,1.72e-37,53;CL:0000051,1.72e-37,53;CL:0000236,2.61e-32,14;CL:0000084,5.72e-24,25;CL:0000827,5.72e-24,25;CL:0000791,4.20e-19,18;CL:0000789,4.20e-19,18;CL:0002420,4.20e-19,18;CL:0002419,4.20e-19,18;CL:0000790,4.20e-19,18;CL:0000945,5.00e-18,24;CL:0000826,5.00e-18,24;CL:0002087,1.99e-17,115;CL:0002031,1.77e-16,120;CL:0000738,6.58e-14,136;CL:0002032,3.89e-12,161;CL:0000837,3.89e-12,161;CL:0000037,2.12e-11,168;CL:0000988,1.54e-10,177;CL:0000625,2.34e-10,11;CL:0000815,3.86e-10,2;CL:0000792,3.86e-10,2;CL:0002677,3.86e-10,2;CL:0000624,3.03e-07,6;CL:0000898,4.97e-07,3|ontology_enrichment_development_v019=CL:0000051;9.09e-25;53!CL:0000790;4.80e-19;18|ontology_enrichment_disease=DOID:1240!1.44e-16!39;DOID:2531!4.41e-14!51;DOID:0060083!4.41e-14!51;DOID:8692!1.00e-10!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.53e-13!15;UBERON:0000179!2.53e-13!15;UBERON:0000463!2.53e-13!15;UBERON:0002390!4.94e-11!102;UBERON:0003061!4.94e-11!102;UBERON:0002193!2.07e-10!112;UBERON:0004177!1.16e-07!7;UBERON:0002370!5.96e-07!4;UBERON:0005058!5.96e-07!4;UBERON:0009113!5.96e-07!4;UBERON:0003295!5.96e-07!4;UBERON:0005562!5.96e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-10;15!UBERON:0000179;1.02e-10;15!UBERON:0000463;1.02e-10;15!UBERON:0002370;2.14e-10;2!UBERON:0005058;2.14e-10;2!UBERON:0009113;2.14e-10;2!UBERON:0002390;3.80e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.76e-11,4;UBERON:0005058,1.76e-11,4;UBERON:0009113,1.76e-11,4;UBERON:0003295,1.76e-11,4;UBERON:0005562,1.76e-11,4;UBERON:0000178,1.32e-10,15;UBERON:0000179,1.32e-10,15;UBERON:0000463,1.32e-10,15;UBERON:0003351,8.60e-08,6;UBERON:0004177,9.89e-07,7;UBERON:0005057,9.89e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.410502947249729,0.550975469195755,0.393364276848904,0,0.154816123316076,0,0,0,0,0.284338464974843,0,0,1.00272223735071,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0.628975936525128,0.673971786878971,0.450530678524519,0.16072558669708,1.14005097496499,0.19891667719909,0.182664153764634,1.75996244461323,1.09227722252426,4.44754626931777,2.56038133539904,1.20118796110804,1.72425731986345,2.64417949113945,1.90810750907073,2.84606484554724,2.93618594685469,0.764546456250458,0,0.560508562981536,0,0.590129310341499,0,1.02800749499755,1.5046784585161,1.62961133316795,0.946895611469467,3.89653456815823,1.11410456885174,1.17842362989935,1.10766947291811,0.270803863765016,1.0247305578054,0.780356085359269,1.15106533222573,0,0.289803085735052,1.03800594213442,1.07016331235885,1.04535523804977,0.339928028092699,0.766440987203842,0.68725489096526,0.759059076058509,0.318565414324097,1.95325036156926,0,1.05402583354441,1.66382594500744,1.24930726552346,0.947109008176067,2.46338399076314,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0,0,0.513372145118994,0,0,0,0,0,0,0,0.41441551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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=286336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25465 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-64bp_to_ENST00000464831_5end | |||
|description=CAGE_peak_8_at_FAM78A_5end | |||
|id=chr9:134145974..134145994,- | |||
|ontology_enrichment_celltype=CL:0000542!1.09e-39!53;CL:0000051!1.09e-39!53;CL:0000838!6.57e-39!52;CL:0002032!3.92e-37!165;CL:0000837!3.92e-37!165;CL:0000037!5.91e-37!172;CL:0000566!5.91e-37!172;CL:0000988!2.39e-36!182;CL:0002087!7.19e-35!119;CL:0000738!1.61e-29!140;CL:0002031!6.21e-29!124;CL:0000084!9.37e-21!25;CL:0000827!9.37e-21!25;CL:0000945!3.79e-20!24;CL:0000826!3.79e-20!24;CL:0000791!1.98e-17!18;CL:0000789!1.98e-17!18;CL:0002420!1.98e-17!18;CL:0002419!1.98e-17!18;CL:0000790!1.98e-17!18;CL:0000236!5.51e-17!14;CL:0000625!1.83e-11!11;CL:0000763!1.92e-08!112;CL:0000049!1.92e-08!112;CL:0002393!8.31e-08!9;CL:0002397!8.31e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.59e-34;13!CL:0000542;9.09e-25;53!CL:0000084;6.01e-24;25!CL:0000791;4.80e-19;18!CL:0000789;4.80e-19;18!CL:0002419;4.80e-19;18!CL:0000945;1.07e-17;24!CL:0000625;3.21e-10;11!CL:0000815;5.55e-10;2!CL:0000792;5.55e-10;2!CL:0002677;5.55e-10;2!CL:0000624;2.73e-07;6!CL:0002087;4.86e-07;104!CL:0000898;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-38,52;CL:0000542,1.72e-37,53;CL:0000051,1.72e-37,53;CL:0000236,2.61e-32,14;CL:0000084,5.72e-24,25;CL:0000827,5.72e-24,25;CL:0000791,4.20e-19,18;CL:0000789,4.20e-19,18;CL:0002420,4.20e-19,18;CL:0002419,4.20e-19,18;CL:0000790,4.20e-19,18;CL:0000945,5.00e-18,24;CL:0000826,5.00e-18,24;CL:0002087,1.99e-17,115;CL:0002031,1.77e-16,120;CL:0000738,6.58e-14,136;CL:0002032,3.89e-12,161;CL:0000837,3.89e-12,161;CL:0000037,2.12e-11,168;CL:0000988,1.54e-10,177;CL:0000625,2.34e-10,11;CL:0000815,3.86e-10,2;CL:0000792,3.86e-10,2;CL:0002677,3.86e-10,2;CL:0000624,3.03e-07,6;CL:0000898,4.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.09e-25;53!CL:0000790;4.80e-19;18 | |||
|ontology_enrichment_disease=DOID:1240!1.44e-16!39;DOID:2531!4.41e-14!51;DOID:0060083!4.41e-14!51;DOID:8692!1.00e-10!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.53e-13!15;UBERON:0000179!2.53e-13!15;UBERON:0000463!2.53e-13!15;UBERON:0002390!4.94e-11!102;UBERON:0003061!4.94e-11!102;UBERON:0002193!2.07e-10!112;UBERON:0004177!1.16e-07!7;UBERON:0002370!5.96e-07!4;UBERON:0005058!5.96e-07!4;UBERON:0009113!5.96e-07!4;UBERON:0003295!5.96e-07!4;UBERON:0005562!5.96e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-10;15!UBERON:0000179;1.02e-10;15!UBERON:0000463;1.02e-10;15!UBERON:0002370;2.14e-10;2!UBERON:0005058;2.14e-10;2!UBERON:0009113;2.14e-10;2!UBERON:0002390;3.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.76e-11,4;UBERON:0005058,1.76e-11,4;UBERON:0009113,1.76e-11,4;UBERON:0003295,1.76e-11,4;UBERON:0005562,1.76e-11,4;UBERON:0000178,1.32e-10,15;UBERON:0000179,1.32e-10,15;UBERON:0000463,1.32e-10,15;UBERON:0003351,8.60e-08,6;UBERON:0004177,9.89e-07,7;UBERON:0005057,9.89e-07,7 | |||
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|short_description=p8@FAM78A | |||
}} |
Revision as of 07:53, 14 September 2013
Short description: | p8@FAM78A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FAM78A_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000464831_5end |
EntrezGene: | FAM78A |
HGNC: | 25465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.59e-38 | 52 |
lymphocyte | 1.72e-37 | 53 |
common lymphoid progenitor | 1.72e-37 | 53 |
B cell | 2.61e-32 | 14 |
T cell | 5.72e-24 | 25 |
pro-T cell | 5.72e-24 | 25 |
mature alpha-beta T cell | 4.20e-19 | 18 |
alpha-beta T cell | 4.20e-19 | 18 |
immature T cell | 4.20e-19 | 18 |
mature T cell | 4.20e-19 | 18 |
immature alpha-beta T cell | 4.20e-19 | 18 |
lymphocyte of B lineage | 5.00e-18 | 24 |
pro-B cell | 5.00e-18 | 24 |
nongranular leukocyte | 1.99e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.77e-16 | 120 |
leukocyte | 6.58e-14 | 136 |
hematopoietic oligopotent progenitor cell | 3.89e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.89e-12 | 161 |
hematopoietic stem cell | 2.12e-11 | 168 |
hematopoietic cell | 1.54e-10 | 177 |
CD8-positive, alpha-beta T cell | 2.34e-10 | 11 |
regulatory T cell | 3.86e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.86e-10 | 2 |
naive regulatory T cell | 3.86e-10 | 2 |
CD4-positive, alpha-beta T cell | 3.03e-07 | 6 |
naive T cell | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.76e-11 | 4 |
hemolymphoid system gland | 1.76e-11 | 4 |
thymic region | 1.76e-11 | 4 |
pharyngeal gland | 1.76e-11 | 4 |
thymus primordium | 1.76e-11 | 4 |
blood | 1.32e-10 | 15 |
haemolymphatic fluid | 1.32e-10 | 15 |
organism substance | 1.32e-10 | 15 |
pharyngeal epithelium | 8.60e-08 | 6 |
hemopoietic organ | 9.89e-07 | 7 |
immune organ | 9.89e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.