FFCP PHASE1:Mm9::chr5:30398904..30398908,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:30398904..30398908,-|id=chr5:30398904..30398908,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.56e-09!147|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.06e-12,29;UBERON:0005057,6.06e-12,29;UBERON:0000077,2.62e-09,35;UBERON:0001048,8.79e-09,134;UBERON:0000153,8.91e-09,43;UBERON:0002390,1.14e-08,45;UBERON:0003061,1.14e-08,45;UBERON:0007811,2.11e-08,36;UBERON:0002193,6.84e-08,48;UBERON:0002405,6.84e-08,48;UBERON:0002370,1.15e-07,23;UBERON:0000974,1.15e-07,23;UBERON:0004807,1.15e-07,23;UBERON:0005058,1.15e-07,23;UBERON:0003351,1.15e-07,23;UBERON:0009113,1.15e-07,23;UBERON:0003295,1.15e-07,23;UBERON:0009722,1.15e-07,23;UBERON:0005562,1.15e-07,23;UBERON:0007690,1.15e-07,23;UBERON:0006562,2.93e-07,24;UBERON:0003408,2.93e-07,24;UBERON:0001557,2.93e-07,24;UBERON:0001042,2.93e-07,24;UBERON:0008814,2.93e-07,24;UBERON:0009145,2.93e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.274228867211478,0,0.17008658030214,0.992909512008853,0.522399578277871,0,0,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,1.04091196059682,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.323533699894818,1.32504911076236,1.93950101254089,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.381210681219194,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.622034853050465,0,0.420883711772948,1.17108398666433,0.459804208866946,0,0.90422890701429,1.56483948048054,1.0249097622788,1.12442069471675,0,1.07783996466421,0.189106080167819,0.527853372491847,0.219195732427575,1.39023624612799,0.348252166522167,0.61734640922383,1.79130840136644,0,0,0.568326998791185,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,1.23413690309903,0.465067889500816,1.07309360559848,0.350296027101508,0.658239399653922,0.492502392237286,0.243206428637567,0.438599962275997,0,0.671032093801859,0,0.102904612379284,0,0.528901133327089,1.2797295032114,1.16118335930219,0.902072229254653,0.80673409849337,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.48523066392647,0,0.407302655690628,0.387904974335251,0.49095073923223,0.252946148497029,0.442830443938806,0.470996183524124,0.493588655687202,0,1.33476084572875,0.196558995113203,0.449724224769707,0.608580364165509,0.964708639009667,0.25462585178142,0.575392274901621,0.972811360650212,1.64736847912849,5.75072826109418,0,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.651859905768103,1.01847051465113,1.87752198630802,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0,1.61924280669958,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.977321756121456,0,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,1.06949213515416,1.26414703174326,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.177340233642274,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0,0.16488625294148,0.645857706783622,0.663442174209714,0.596861720015682,0.656563598980245,0,0.18542530201051,0.341741761595705,0.619160603889667,1.11116716421827,3.57900068308913,3.55404992074665,2.74533807847827,0.169978429993855,0,0.276399947608848,0,0.632671987162271,0.406638934253697,0.216010681643603,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.598066184175915,1.15820943319968,0.194451188344048,0.904118764344118,0.844780627453891,0.821500670520278,1.17183946359555,0.524296722128554,0.724752362478018,0.288030006257865,0.316011120628178,1.21635129174099,1.43795340030758,0.649604114888975,0.716106782669926,0.596044064343795,2.04332264183947,1.9199638532695,2.01932899896295,2.5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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:30398904..30398908,- | |||
|id=chr5:30398904..30398908,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.56e-09!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.06e-12,29;UBERON:0005057,6.06e-12,29;UBERON:0000077,2.62e-09,35;UBERON:0001048,8.79e-09,134;UBERON:0000153,8.91e-09,43;UBERON:0002390,1.14e-08,45;UBERON:0003061,1.14e-08,45;UBERON:0007811,2.11e-08,36;UBERON:0002193,6.84e-08,48;UBERON:0002405,6.84e-08,48;UBERON:0002370,1.15e-07,23;UBERON:0000974,1.15e-07,23;UBERON:0004807,1.15e-07,23;UBERON:0005058,1.15e-07,23;UBERON:0003351,1.15e-07,23;UBERON:0009113,1.15e-07,23;UBERON:0003295,1.15e-07,23;UBERON:0009722,1.15e-07,23;UBERON:0005562,1.15e-07,23;UBERON:0007690,1.15e-07,23;UBERON:0006562,2.93e-07,24;UBERON:0003408,2.93e-07,24;UBERON:0001557,2.93e-07,24;UBERON:0001042,2.93e-07,24;UBERON:0008814,2.93e-07,24;UBERON:0009145,2.93e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.274228867211478,0,0.17008658030214,0.992909512008853,0.522399578277871,0,0,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,1.04091196059682,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.323533699894818,1.32504911076236,1.93950101254089,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.381210681219194,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.622034853050465,0,0.420883711772948,1.17108398666433,0.459804208866946,0,0.90422890701429,1.56483948048054,1.0249097622788,1.12442069471675,0,1.07783996466421,0.189106080167819,0.527853372491847,0.219195732427575,1.39023624612799,0.348252166522167,0.61734640922383,1.79130840136644,0,0,0.568326998791185,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,1.23413690309903,0.465067889500816,1.07309360559848,0.350296027101508,0.658239399653922,0.492502392237286,0.243206428637567,0.438599962275997,0,0.671032093801859,0,0.102904612379284,0,0.528901133327089,1.2797295032114,1.16118335930219,0.902072229254653,0.80673409849337,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.48523066392647,0,0.407302655690628,0.387904974335251,0.49095073923223,0.252946148497029,0.442830443938806,0.470996183524124,0.493588655687202,0,1.33476084572875,0.196558995113203,0.449724224769707,0.608580364165509,0.964708639009667,0.25462585178142,0.575392274901621,0.972811360650212,1.64736847912849,5.75072826109418,0,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.651859905768103,1.01847051465113,1.87752198630802,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0,1.61924280669958,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.977321756121456,0,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,1.06949213515416,1.26414703174326,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.177340233642274,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0,0.16488625294148,0.645857706783622,0.663442174209714,0.596861720015682,0.656563598980245,0,0.18542530201051,0.341741761595705,0.619160603889667,1.11116716421827,3.57900068308913,3.55404992074665,2.74533807847827,0.169978429993855,0,0.276399947608848,0,0.632671987162271,0.406638934253697,0.216010681643603,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.598066184175915,1.15820943319968,0.194451188344048,0.904118764344118,0.844780627453891,0.821500670520278,1.17183946359555,0.524296722128554,0.724752362478018,0.288030006257865,0.316011120628178,1.21635129174099,1.43795340030758,0.649604114888975,0.716106782669926,0.596044064343795,2.04332264183947,1.9199638532695,2.01932899896295,2.51482461961499,2.01652370273681,1.07203668813728,1.53938946624527,1.63627663054197,0,0.221985953374065,0.179427713218951,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.749132059759059,0.576226371643824,0.459483751644906,0,0.115884325944855,1.15745532278223,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.581385666529314,0.282328141245992,0.592302255241736,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.619747364743864,0.578719832943424,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr5:30398904..30398908,- | |||
}} |
Revision as of 07:22, 14 September 2013
Short description: | p@chr5:30398904..30398908, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:30398904..30398908, - |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.06e-12 | 29 |
immune organ | 6.06e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 2.62e-09 | 35 |
primordium | 8.79e-09 | 134 |
anterior region of body | 8.91e-09 | 43 |
hematopoietic system | 1.14e-08 | 45 |
blood island | 1.14e-08 | 45 |
craniocervical region | 2.11e-08 | 36 |
hemolymphoid system | 6.84e-08 | 48 |
immune system | 6.84e-08 | 48 |
thymus | 1.15e-07 | 23 |
neck | 1.15e-07 | 23 |
respiratory system epithelium | 1.15e-07 | 23 |
hemolymphoid system gland | 1.15e-07 | 23 |
pharyngeal epithelium | 1.15e-07 | 23 |
thymic region | 1.15e-07 | 23 |
pharyngeal gland | 1.15e-07 | 23 |
entire pharyngeal arch endoderm | 1.15e-07 | 23 |
thymus primordium | 1.15e-07 | 23 |
early pharyngeal endoderm | 1.15e-07 | 23 |
pharynx | 2.93e-07 | 24 |
gland of gut | 2.93e-07 | 24 |
upper respiratory tract | 2.93e-07 | 24 |
chordate pharynx | 2.93e-07 | 24 |
pharyngeal arch system | 2.93e-07 | 24 |
pharyngeal region of foregut | 2.93e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.