FFCP PHASE1:Mm9::chr5:123516216..123516243,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=415|UniProt=|association_with_transcript=-7bp_to_ENSMUST00000119611_5end|description=CAGE_peak_1_at_ENSMUST00000119611_5end|id=chr5:123516216..123516243,+|ontology_enrichment_celltype=CL:0000063!1.03e-20!66;CL:0000144!5.22e-16!121;CL:0000012!5.22e-16!121;CL:0002371!5.29e-15!118;CL:0000548!1.60e-13!115;CL:0000004!1.60e-13!115;CL:0000255!1.60e-13!115;CL:0000066!1.86e-11!25;CL:0002320!4.36e-10!46;CL:0000134!4.36e-10!46;CL:0002031!9.87e-10!25;CL:0000988!1.28e-09!32;CL:0002032!1.28e-09!32;CL:0000037!1.28e-09!32;CL:0000566!1.28e-09!32;CL:0000837!1.28e-09!32;CL:0000219!2.03e-09!54;CL:0002076!2.31e-09!15;CL:0000223!6.60e-09!20;CL:0000034!7.58e-09!97;CL:0000838!6.32e-08!12;CL:0000084!2.69e-07!11;CL:0000827!2.69e-07!11;CL:0000542!6.33e-07!13;CL:0000051!6.33e-07!13;CL:0000723!6.69e-07!91;CL:0000048!6.69e-07!91;CL:0002563!7.85e-07!9;CL:0002251!7.85e-07!9;CL:0000738!9.98e-07!17;CL:0002087!9.98e-07!17|ontology_enrichment_celltype_v019_2=CL:0002076,1.68e-18,15;CL:0000066,1.18e-16,25;CL:0000988,2.72e-16,32;CL:0002032,2.72e-16,32;CL:0000037,2.72e-16,32;CL:0000837,2.72e-16,32;CL:0002031,3.42e-16,25;CL:0002320,2.60e-15,46;CL:0000134,2.60e-15,46;CL:0000223,4.48e-15,20;CL:0000219,1.85e-14,54;CL:0000838,5.98e-13,12;CL:0000738,1.13e-12,17;CL:0002087,1.13e-12,17;CL:0002563,1.75e-12,9;CL:0002251,1.75e-12,9;CL:0000542,9.31e-12,13;CL:0000051,9.31e-12,13;CL:0000084,1.12e-11,11;CL:0000827,1.12e-11,11;CL:0000791,1.33e-11,9;CL:0000789,1.33e-11,9;CL:0002420,1.33e-11,9;CL:0002419,1.33e-11,9;CL:0000790,1.33e-11,9;CL:0000034,1.67e-11,97;CL:0000624,2.32e-10,8;CL:0000239,1.88e-09,6;CL:0000677,1.88e-09,6;CL:0000584,1.88e-09,6;CL:0000723,3.05e-09,91;CL:0000048,3.05e-09,91;CL:0000075,5.70e-08,7;CL:0000893,7.20e-08,6;CL:0002489,7.20e-08,6;CL:0000898,7.20e-08,6;CL:0000809,7.20e-08,6;CL:0000810,7.20e-08,6;CL:0000895,7.20e-08,6;CL:0000808,7.20e-08,6;CL:0000894,7.20e-08,6;CL:0000806,7.20e-08,6;CL:0000807,7.20e-08,6;CL:0000805,7.20e-08,6;CL:0002425,7.20e-08,6;CL:0002436,7.20e-08,6;CL:0002427,7.20e-08,6;CL:0002428,7.20e-08,6;CL:0002429,7.20e-08,6;CL:0002433,7.20e-08,6;CL:0002431,7.20e-08,6;CL:0002432,7.20e-08,6;CL:0000553,9.16e-07,6;CL:0000556,9.16e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.36e-10!46;UBERON:0000344!4.83e-09!15;UBERON:0000485!1.34e-07!11;UBERON:0001242!1.44e-07!13;UBERON:0000060!1.44e-07!13;UBERON:0001262!1.44e-07!13;UBERON:0004786!1.44e-07!13;UBERON:0003350!7.85e-07!9;UBERON:0004808!7.85e-07!9;UBERON:0001277!7.85e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.98e-18,15;UBERON:0002384,2.60e-15,46;UBERON:0001242,9.41e-15,13;UBERON:0001262,9.41e-15,13;UBERON:0004786,9.41e-15,13;UBERON:0003350,1.75e-12,9;UBERON:0004808,1.75e-12,9;UBERON:0001277,1.75e-12,9;UBERON:0000485,7.30e-10,11;UBERON:0004923,9.11e-10,24|phase1_expression=0.80074423552397,3.48975407639361,2.27499619694768,18.4503168897166,9.01612313903425,1.51091344720701,4.67225281191051,1.93684985162364,1.12630977721333,1.17032263160997,2.39705155515707,1.43589886191606,4.79362043807376,2.44777126773193,0,4.656931149966,6.29605690315332,4.41647031501533,3.29074640653773,4.2438965179803,0,0.297872853602656,6.00759515019551,10.239515058778,5.96464130774642,4.59385571292016,1.7230479846363,3.01659725760245,8.7410772949932,2.01624103807945,2.43903561720835,0.635030673459631,0.61506478758457,0,2.02196133825892,2.65975432573588,1.02084678131185,1.67412652294763,3.1253413780952,2.61761871986899,1.17646297606203,0,1.94204141212461,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,4.36234775750115,6.5282592781021,3.6970317905671,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,2.57469057332826,2.04043212288321,4.63783181922684,21.5105969245347,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,4.41636207824877,7.0667914902068,0.985903938436763,3.84979432242953,0,21.3320010945999,7.57718643539249,6.33399663687746,6.57181778519218,0.22836775943812,0,0,0,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.838705871541442,4.79922184794726,1.01656181658452,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0,0,2.05878325691772,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.493679549740441,0.656669856316381,0.243206428637567,0.292399974850665,0.658650345873152,0.402619256281115,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0.162964976442026,0,0,0.502518772325447,0,0,0.157635144106191,0,0,0,0,0.144649058581512,12.0633027151418,8.15858525728064,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.69975726161829,1.10559979043539,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0.120195449519969,0,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,5.77163478772568,1.61484941897056,4.53288464183012,0.19318959403219,0,0,0,0,0,0.460325236507177,0,9.10821866421544,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p1@ENSMUST00000119611}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=415 | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENSMUST00000119611_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000119611_5end | |||
|id=chr5:123516216..123516243,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.03e-20!66;CL:0000144!5.22e-16!121;CL:0000012!5.22e-16!121;CL:0002371!5.29e-15!118;CL:0000548!1.60e-13!115;CL:0000004!1.60e-13!115;CL:0000255!1.60e-13!115;CL:0000066!1.86e-11!25;CL:0002320!4.36e-10!46;CL:0000134!4.36e-10!46;CL:0002031!9.87e-10!25;CL:0000988!1.28e-09!32;CL:0002032!1.28e-09!32;CL:0000037!1.28e-09!32;CL:0000566!1.28e-09!32;CL:0000837!1.28e-09!32;CL:0000219!2.03e-09!54;CL:0002076!2.31e-09!15;CL:0000223!6.60e-09!20;CL:0000034!7.58e-09!97;CL:0000838!6.32e-08!12;CL:0000084!2.69e-07!11;CL:0000827!2.69e-07!11;CL:0000542!6.33e-07!13;CL:0000051!6.33e-07!13;CL:0000723!6.69e-07!91;CL:0000048!6.69e-07!91;CL:0002563!7.85e-07!9;CL:0002251!7.85e-07!9;CL:0000738!9.98e-07!17;CL:0002087!9.98e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.68e-18,15;CL:0000066,1.18e-16,25;CL:0000988,2.72e-16,32;CL:0002032,2.72e-16,32;CL:0000037,2.72e-16,32;CL:0000837,2.72e-16,32;CL:0002031,3.42e-16,25;CL:0002320,2.60e-15,46;CL:0000134,2.60e-15,46;CL:0000223,4.48e-15,20;CL:0000219,1.85e-14,54;CL:0000838,5.98e-13,12;CL:0000738,1.13e-12,17;CL:0002087,1.13e-12,17;CL:0002563,1.75e-12,9;CL:0002251,1.75e-12,9;CL:0000542,9.31e-12,13;CL:0000051,9.31e-12,13;CL:0000084,1.12e-11,11;CL:0000827,1.12e-11,11;CL:0000791,1.33e-11,9;CL:0000789,1.33e-11,9;CL:0002420,1.33e-11,9;CL:0002419,1.33e-11,9;CL:0000790,1.33e-11,9;CL:0000034,1.67e-11,97;CL:0000624,2.32e-10,8;CL:0000239,1.88e-09,6;CL:0000677,1.88e-09,6;CL:0000584,1.88e-09,6;CL:0000723,3.05e-09,91;CL:0000048,3.05e-09,91;CL:0000075,5.70e-08,7;CL:0000893,7.20e-08,6;CL:0002489,7.20e-08,6;CL:0000898,7.20e-08,6;CL:0000809,7.20e-08,6;CL:0000810,7.20e-08,6;CL:0000895,7.20e-08,6;CL:0000808,7.20e-08,6;CL:0000894,7.20e-08,6;CL:0000806,7.20e-08,6;CL:0000807,7.20e-08,6;CL:0000805,7.20e-08,6;CL:0002425,7.20e-08,6;CL:0002436,7.20e-08,6;CL:0002427,7.20e-08,6;CL:0002428,7.20e-08,6;CL:0002429,7.20e-08,6;CL:0002433,7.20e-08,6;CL:0002431,7.20e-08,6;CL:0002432,7.20e-08,6;CL:0000553,9.16e-07,6;CL:0000556,9.16e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.36e-10!46;UBERON:0000344!4.83e-09!15;UBERON:0000485!1.34e-07!11;UBERON:0001242!1.44e-07!13;UBERON:0000060!1.44e-07!13;UBERON:0001262!1.44e-07!13;UBERON:0004786!1.44e-07!13;UBERON:0003350!7.85e-07!9;UBERON:0004808!7.85e-07!9;UBERON:0001277!7.85e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.98e-18,15;UBERON:0002384,2.60e-15,46;UBERON:0001242,9.41e-15,13;UBERON:0001262,9.41e-15,13;UBERON:0004786,9.41e-15,13;UBERON:0003350,1.75e-12,9;UBERON:0004808,1.75e-12,9;UBERON:0001277,1.75e-12,9;UBERON:0000485,7.30e-10,11;UBERON:0004923,9.11e-10,24 | |||
|phase1_expression=0.80074423552397,3.48975407639361,2.27499619694768,18.4503168897166,9.01612313903425,1.51091344720701,4.67225281191051,1.93684985162364,1.12630977721333,1.17032263160997,2.39705155515707,1.43589886191606,4.79362043807376,2.44777126773193,0,4.656931149966,6.29605690315332,4.41647031501533,3.29074640653773,4.2438965179803,0,0.297872853602656,6.00759515019551,10.239515058778,5.96464130774642,4.59385571292016,1.7230479846363,3.01659725760245,8.7410772949932,2.01624103807945,2.43903561720835,0.635030673459631,0.61506478758457,0,2.02196133825892,2.65975432573588,1.02084678131185,1.67412652294763,3.1253413780952,2.61761871986899,1.17646297606203,0,1.94204141212461,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,4.36234775750115,6.5282592781021,3.6970317905671,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,2.57469057332826,2.04043212288321,4.63783181922684,21.5105969245347,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,4.41636207824877,7.0667914902068,0.985903938436763,3.84979432242953,0,21.3320010945999,7.57718643539249,6.33399663687746,6.57181778519218,0.22836775943812,0,0,0,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.838705871541442,4.79922184794726,1.01656181658452,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0,0,2.05878325691772,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.493679549740441,0.656669856316381,0.243206428637567,0.292399974850665,0.658650345873152,0.402619256281115,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0.162964976442026,0,0,0.502518772325447,0,0,0.157635144106191,0,0,0,0,0.144649058581512,12.0633027151418,8.15858525728064,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.69975726161829,1.10559979043539,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0.120195449519969,0,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,5.77163478772568,1.61484941897056,4.53288464183012,0.19318959403219,0,0,0,0,0,0.460325236507177,0,9.10821866421544,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p1@ENSMUST00000119611 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p1@ENSMUST00000119611 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000119611_5end |
Coexpression cluster: | MCL_coexpression_mm9:415 |
Association with transcript: | -7bp_to_ENSMUST00000119611_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 7.98e-18 | 15 |
connective tissue | 2.60e-15 | 46 |
intestinal mucosa | 9.41e-15 | 13 |
wall of intestine | 9.41e-15 | 13 |
gastrointestinal system mucosa | 9.41e-15 | 13 |
epithelium of mucosa | 1.75e-12 | 9 |
gastrointestinal system epithelium | 1.75e-12 | 9 |
intestinal epithelium | 1.75e-12 | 9 |
simple columnar epithelium | 7.30e-10 | 11 |
organ component layer | 9.11e-10 | 24 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.