FFCP PHASE1:Mm9::chr5:117813507..117813521,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59043|HGNC=|MCL_coexpression_id=12|UniProt=E9Q8J9|association_with_transcript=-9bp_to_ENSMUST00000111959,uc008zfr.1_5end|description=CAGE_peak_5_at_Wsb2_5end|id=chr5:117813507..117813521,+|ontology_enrichment_celltype=CL:0000239!6.23e-09!6;CL:0000677!6.23e-09!6;CL:0000212!6.23e-09!6;CL:0000584!6.23e-09!6;CL:0000075!1.79e-07!7;CL:0002563!4.69e-07!9;CL:0002251!4.69e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,4.92e-12,6;CL:0000677,4.92e-12,6;CL:0000584,4.92e-12,6;CL:0000075,2.93e-10,7;CL:0000682,3.92e-09,3;CL:0002563,6.86e-08,9;CL:0002251,6.86e-08,9;CL:0000066,9.92e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.19e-17!43;UBERON:0000344!6.61e-14!15;UBERON:0005409!8.63e-14!59;UBERON:0001242!1.13e-11!13;UBERON:0000060!1.13e-11!13;UBERON:0001262!1.13e-11!13;UBERON:0004786!1.13e-11!13;UBERON:0004923!1.47e-11!24;UBERON:0003350!4.69e-07!9;UBERON:0004808!4.69e-07!9;UBERON:0001277!4.69e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-38,31;UBERON:0005409,3.96e-26,47;UBERON:0000344,1.94e-20,15;UBERON:0004923,1.16e-16,24;UBERON:0001242,3.25e-16,13;UBERON:0001262,3.25e-16,13;UBERON:0004786,3.25e-16,13;UBERON:0004119,2.50e-12,118;UBERON:0000925,2.50e-12,118;UBERON:0006595,2.50e-12,118;UBERON:0001007,1.49e-11,116;UBERON:0001555,1.49e-11,116;UBERON:0007026,1.49e-11,116;UBERON:0002108,5.71e-11,4;UBERON:0004921,1.09e-09,114;UBERON:0000331,1.92e-08,3;UBERON:0002116,1.92e-08,3;UBERON:0001204,1.92e-08,3;UBERON:0001168,1.92e-08,3;UBERON:0003350,6.86e-08,9;UBERON:0004808,6.86e-08,9;UBERON:0001277,6.86e-08,9|phase1_expression=0,8.72438519098403,6.82498859084304,7.56160528267075,14.0250804384977,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,3.67054849707472,6.89078356938024,6.8921919385452,2.58565479223067,5.13063232532209,4.03248207615889,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,4.75979933595425,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0.150722640552623,0,0,4.6967043869531,0,0,0,0,0,1.86391761218122,0,0,2.55457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,4.49565963328025,0,0,0,0.403367049246685,0,1.33157938278791,5.21981967698963,4.77626968699632,5.7807098024062,7.56034593756373,3.70431765526328,1.79763881730844,3.6743468478698,6.37252074413975,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0,3.24037433229482,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,1.00730769818447,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.644613162144895,0.382576664137687,0,0|short_description=p5@Wsb2}} | ||
|EntrezGene=59043 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=E9Q8J9 | |||
|association_with_transcript=-9bp_to_ENSMUST00000111959,uc008zfr.1_5end | |||
|description=CAGE_peak_5_at_Wsb2_5end | |||
|id=chr5:117813507..117813521,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.23e-09!6;CL:0000677!6.23e-09!6;CL:0000212!6.23e-09!6;CL:0000584!6.23e-09!6;CL:0000075!1.79e-07!7;CL:0002563!4.69e-07!9;CL:0002251!4.69e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.92e-12,6;CL:0000677,4.92e-12,6;CL:0000584,4.92e-12,6;CL:0000075,2.93e-10,7;CL:0000682,3.92e-09,3;CL:0002563,6.86e-08,9;CL:0002251,6.86e-08,9;CL:0000066,9.92e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.19e-17!43;UBERON:0000344!6.61e-14!15;UBERON:0005409!8.63e-14!59;UBERON:0001242!1.13e-11!13;UBERON:0000060!1.13e-11!13;UBERON:0001262!1.13e-11!13;UBERON:0004786!1.13e-11!13;UBERON:0004923!1.47e-11!24;UBERON:0003350!4.69e-07!9;UBERON:0004808!4.69e-07!9;UBERON:0001277!4.69e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-38,31;UBERON:0005409,3.96e-26,47;UBERON:0000344,1.94e-20,15;UBERON:0004923,1.16e-16,24;UBERON:0001242,3.25e-16,13;UBERON:0001262,3.25e-16,13;UBERON:0004786,3.25e-16,13;UBERON:0004119,2.50e-12,118;UBERON:0000925,2.50e-12,118;UBERON:0006595,2.50e-12,118;UBERON:0001007,1.49e-11,116;UBERON:0001555,1.49e-11,116;UBERON:0007026,1.49e-11,116;UBERON:0002108,5.71e-11,4;UBERON:0004921,1.09e-09,114;UBERON:0000331,1.92e-08,3;UBERON:0002116,1.92e-08,3;UBERON:0001204,1.92e-08,3;UBERON:0001168,1.92e-08,3;UBERON:0003350,6.86e-08,9;UBERON:0004808,6.86e-08,9;UBERON:0001277,6.86e-08,9 | |||
|phase1_expression=0,8.72438519098403,6.82498859084304,7.56160528267075,14.0250804384977,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,3.67054849707472,6.89078356938024,6.8921919385452,2.58565479223067,5.13063232532209,4.03248207615889,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,4.75979933595425,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0.150722640552623,0,0,4.6967043869531,0,0,0,0,0,1.86391761218122,0,0,2.55457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,4.49565963328025,0,0,0,0.403367049246685,0,1.33157938278791,5.21981967698963,4.77626968699632,5.7807098024062,7.56034593756373,3.70431765526328,1.79763881730844,3.6743468478698,6.37252074413975,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0,3.24037433229482,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,1.00730769818447,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p5@Wsb2 | |||
}} |
Revision as of 06:10, 14 September 2013
Short description: | p5@Wsb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Wsb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -9bp_to_ENSMUST00000111959, uc008zfr.1_5end |
EntrezGene: | Wsb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.92e-12 | 6 |
gut absorptive cell | 4.92e-12 | 6 |
enterocyte | 4.92e-12 | 6 |
columnar/cuboidal epithelial cell | 2.93e-10 | 7 |
M cell of gut | 3.92e-09 | 3 |
intestinal epithelial cell | 6.86e-08 | 9 |
epithelial cell of alimentary canal | 6.86e-08 | 9 |
epithelial cell | 9.92e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.62e-38 | 31 |
gastrointestinal system | 3.96e-26 | 47 |
mucosa | 1.94e-20 | 15 |
organ component layer | 1.16e-16 | 24 |
intestinal mucosa | 3.25e-16 | 13 |
wall of intestine | 3.25e-16 | 13 |
gastrointestinal system mucosa | 3.25e-16 | 13 |
endoderm-derived structure | 2.50e-12 | 118 |
endoderm | 2.50e-12 | 118 |
presumptive endoderm | 2.50e-12 | 118 |
digestive system | 1.49e-11 | 116 |
digestive tract | 1.49e-11 | 116 |
primitive gut | 1.49e-11 | 116 |
small intestine | 5.71e-11 | 4 |
subdivision of digestive tract | 1.09e-09 | 114 |
ileal mucosa | 1.92e-08 | 3 |
ileum | 1.92e-08 | 3 |
mucosa of small intestine | 1.92e-08 | 3 |
wall of small intestine | 1.92e-08 | 3 |
epithelium of mucosa | 6.86e-08 | 9 |
gastrointestinal system epithelium | 6.86e-08 | 9 |
intestinal epithelium | 6.86e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.