FFCP PHASE1:Mm9::chr4:91030569..91030573,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:91030569..91030573,-|id=chr4:91030569..91030573,-|ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!1.05e-13!33;CL:0000047!1.05e-13!33;CL:0000031!1.05e-13!33;CL:0000404!1.05e-13!33;CL:0002319!5.46e-10!43;CL:0000393!6.12e-10!39;CL:0000211!6.12e-10!39;CL:0000221!1.63e-09!44;CL:0000133!1.63e-09!44;CL:0000055!3.87e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-29,23;CL:0000337,2.64e-29,23;CL:0000540,8.79e-20,33;CL:0000047,8.79e-20,33;CL:0000031,8.79e-20,33;CL:0000404,8.79e-20,33;CL:0000393,2.09e-16,39;CL:0000211,2.09e-16,39;CL:0002319,1.12e-14,43;CL:0000221,2.70e-14,44;CL:0000133,2.70e-14,44;CL:0002612,8.90e-14,3;CL:0002613,1.32e-12,3;CL:0002321,3.66e-08,70;CL:0000120,4.56e-07,3;CL:0002614,6.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.27e-23!71;UBERON:0003075!2.27e-23!71;UBERON:0007284!2.27e-23!71;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!1.84e-22!52;UBERON:0005068!1.84e-22!52;UBERON:0006241!1.84e-22!52;UBERON:0007135!1.84e-22!52;UBERON:0001017!3.46e-22!73;UBERON:0005743!3.46e-22!73;UBERON:0002616!1.04e-19!49;UBERON:0000955!5.66e-19!50;UBERON:0006238!5.66e-19!50;UBERON:0002020!6.04e-19!34;UBERON:0004121!8.73e-19!102;UBERON:0000924!8.73e-19!102;UBERON:0006601!8.73e-19!102;UBERON:0003080!2.02e-18!40;UBERON:0002780!6.82e-18!39;UBERON:0001890!6.82e-18!39;UBERON:0006240!6.82e-18!39;UBERON:0003056!8.01e-18!49;UBERON:0000033!2.09e-16!63;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0000956!3.19e-09!21;UBERON:0001869!3.19e-09!21;UBERON:0000203!3.19e-09!21;UBERON:0007811!4.53e-08!86;UBERON:0002619!3.57e-07!17;UBERON:0002420!4.99e-07!8;UBERON:0007245!4.99e-07!8;UBERON:0010009!4.99e-07!8;UBERON:0010011!4.99e-07!8;UBERON:0000454!4.99e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.02e-19,34;UBERON:0001948,2.88e-14,5;UBERON:0002315,2.88e-14,5;UBERON:0002257,8.90e-14,3;UBERON:0000073,4.61e-13,54;UBERON:0002420,5.27e-13,8;UBERON:0007245,5.27e-13,8;UBERON:0010009,5.27e-13,8;UBERON:0010011,5.27e-13,8;UBERON:0000454,5.27e-13,8;UBERON:0001017,2.10e-12,73;UBERON:0001016,5.31e-12,75;UBERON:0002240,6.46e-12,6;UBERON:0005174,6.46e-12,6;UBERON:0001137,6.46e-12,6;UBERON:0001049,1.10e-11,52;UBERON:0005068,1.10e-11,52;UBERON:0006241,1.10e-11,52;UBERON:0007135,1.10e-11,52;UBERON:0003528,1.75e-10,29;UBERON:0002791,1.75e-10,29;UBERON:0001893,1.75e-10,29;UBERON:0002346,4.42e-09,64;UBERON:0003075,4.42e-09,64;UBERON:0007284,4.42e-09,64;UBERON:0004121,6.77e-09,95;UBERON:0000924,6.77e-09,95;UBERON:0006601,6.77e-09,95;UBERON:0000369,9.03e-08,5;UBERON:0002435,9.03e-08,5;UBERON:0000204,9.03e-08,5;UBERON:0010082,9.03e-08,5;UBERON:0010371,1.09e-07,73;UBERON:0002780,1.83e-07,39;UBERON:0001890,1.83e-07,39;UBERON:0006240,1.83e-07,39;UBERON:0003080,3.04e-07,40;UBERON:0002038,6.81e-07,3;UBERON:0009663,6.81e-07,3;UBERON:0009661,6.81e-07,3;UBERON:0000125,6.81e-07,3;UBERON:0002308,6.81e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,0.61245399607477,0.287536413054709,0,1.10115880999389,0.510749352340751,0.46081959976873,1.05509030184155,1.28082701043374,1.04182674111352,0.558365998002762,2.8138130501584,1.37518422999129,1.17851434189467,2.70506193518296,1.4911955666024,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.617068451549513,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.21433703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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:91030569..91030573,- | |||
|id=chr4:91030569..91030573,- | |||
|ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!1.05e-13!33;CL:0000047!1.05e-13!33;CL:0000031!1.05e-13!33;CL:0000404!1.05e-13!33;CL:0002319!5.46e-10!43;CL:0000393!6.12e-10!39;CL:0000211!6.12e-10!39;CL:0000221!1.63e-09!44;CL:0000133!1.63e-09!44;CL:0000055!3.87e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-29,23;CL:0000337,2.64e-29,23;CL:0000540,8.79e-20,33;CL:0000047,8.79e-20,33;CL:0000031,8.79e-20,33;CL:0000404,8.79e-20,33;CL:0000393,2.09e-16,39;CL:0000211,2.09e-16,39;CL:0002319,1.12e-14,43;CL:0000221,2.70e-14,44;CL:0000133,2.70e-14,44;CL:0002612,8.90e-14,3;CL:0002613,1.32e-12,3;CL:0002321,3.66e-08,70;CL:0000120,4.56e-07,3;CL:0002614,6.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.27e-23!71;UBERON:0003075!2.27e-23!71;UBERON:0007284!2.27e-23!71;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!1.84e-22!52;UBERON:0005068!1.84e-22!52;UBERON:0006241!1.84e-22!52;UBERON:0007135!1.84e-22!52;UBERON:0001017!3.46e-22!73;UBERON:0005743!3.46e-22!73;UBERON:0002616!1.04e-19!49;UBERON:0000955!5.66e-19!50;UBERON:0006238!5.66e-19!50;UBERON:0002020!6.04e-19!34;UBERON:0004121!8.73e-19!102;UBERON:0000924!8.73e-19!102;UBERON:0006601!8.73e-19!102;UBERON:0003080!2.02e-18!40;UBERON:0002780!6.82e-18!39;UBERON:0001890!6.82e-18!39;UBERON:0006240!6.82e-18!39;UBERON:0003056!8.01e-18!49;UBERON:0000033!2.09e-16!63;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0000956!3.19e-09!21;UBERON:0001869!3.19e-09!21;UBERON:0000203!3.19e-09!21;UBERON:0007811!4.53e-08!86;UBERON:0002619!3.57e-07!17;UBERON:0002420!4.99e-07!8;UBERON:0007245!4.99e-07!8;UBERON:0010009!4.99e-07!8;UBERON:0010011!4.99e-07!8;UBERON:0000454!4.99e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.02e-19,34;UBERON:0001948,2.88e-14,5;UBERON:0002315,2.88e-14,5;UBERON:0002257,8.90e-14,3;UBERON:0000073,4.61e-13,54;UBERON:0002420,5.27e-13,8;UBERON:0007245,5.27e-13,8;UBERON:0010009,5.27e-13,8;UBERON:0010011,5.27e-13,8;UBERON:0000454,5.27e-13,8;UBERON:0001017,2.10e-12,73;UBERON:0001016,5.31e-12,75;UBERON:0002240,6.46e-12,6;UBERON:0005174,6.46e-12,6;UBERON:0001137,6.46e-12,6;UBERON:0001049,1.10e-11,52;UBERON:0005068,1.10e-11,52;UBERON:0006241,1.10e-11,52;UBERON:0007135,1.10e-11,52;UBERON:0003528,1.75e-10,29;UBERON:0002791,1.75e-10,29;UBERON:0001893,1.75e-10,29;UBERON:0002346,4.42e-09,64;UBERON:0003075,4.42e-09,64;UBERON:0007284,4.42e-09,64;UBERON:0004121,6.77e-09,95;UBERON:0000924,6.77e-09,95;UBERON:0006601,6.77e-09,95;UBERON:0000369,9.03e-08,5;UBERON:0002435,9.03e-08,5;UBERON:0000204,9.03e-08,5;UBERON:0010082,9.03e-08,5;UBERON:0010371,1.09e-07,73;UBERON:0002780,1.83e-07,39;UBERON:0001890,1.83e-07,39;UBERON:0006240,1.83e-07,39;UBERON:0003080,3.04e-07,40;UBERON:0002038,6.81e-07,3;UBERON:0009663,6.81e-07,3;UBERON:0009661,6.81e-07,3;UBERON:0000125,6.81e-07,3;UBERON:0002308,6.81e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,0.61245399607477,0.287536413054709,0,1.10115880999389,0.510749352340751,0.46081959976873,1.05509030184155,1.28082701043374,1.04182674111352,0.558365998002762,2.8138130501584,1.37518422999129,1.17851434189467,2.70506193518296,1.4911955666024,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.617068451549513,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0,0,0,0,0,0,0,0,0.330916980914195,0,0,0,0.234714477291508,0.13020438484395,0.419437377702843,1.20792060413003,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0.564751842617067,0,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,2.07104124700728,0,1.59609949360412,0.512200817262403,0.729320151204882,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.561849044819294,0.320125762024346,0.516919220600519,0,0.463537303779422,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.761531471025089,1.09756783723664,0.263069711437843,0.679020569229309,0,0.355905054372522,0.29551344712669,1.22769312950907,0.154936841185966,0.578719832943424,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr4:91030569..91030573,- | |||
}} |
Revision as of 05:35, 14 September 2013
Short description: | p@chr4:91030569..91030573, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:91030569..91030573, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.64e-29 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-29 | 23 |
neuron | 8.79e-20 | 33 |
neuronal stem cell | 8.79e-20 | 33 |
neuroblast | 8.79e-20 | 33 |
electrically signaling cell | 8.79e-20 | 33 |
electrically responsive cell | 2.09e-16 | 39 |
electrically active cell | 2.09e-16 | 39 |
neural cell | 1.12e-14 | 43 |
ectodermal cell | 2.70e-14 | 44 |
neurectodermal cell | 2.70e-14 | 44 |
neuron of the ventral spinal cord | 8.90e-14 | 3 |
striatum neuron | 1.32e-12 | 3 |
embryonic cell | 3.66e-08 | 70 |
granule cell | 4.56e-07 | 3 |
neuron of the substantia nigra | 6.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.