FFCP PHASE1:Hg19::chr8:48585931..48585943,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23514|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28971|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc010lxv.1_5end|coexpression_cluster_id=C28|description=CAGE_peak_7_at_KIAA0146_5end|id=chr8:48585931..48585943,+|ontology_enrichment_celltype=CL:0002251!1.34e-22!21;CL:0002623!1.15e-19!3;CL:0002076!2.14e-15!43;CL:0000622!5.17e-12!5;CL:0000223!1.15e-10!59;CL:0000154!4.34e-10!6;CL:0000240!1.78e-09!6;CL:0000311!1.78e-09!6;CL:0000079!1.78e-09!6;CL:0000237!1.78e-09!6;CL:0000036!1.78e-09!6;CL:0000357!1.78e-09!6;CL:0000114!1.78e-09!6;CL:0002166!7.91e-09!3;CL:0002336!1.72e-07!1;CL:0002261!1.72e-07!1;CL:0002170!1.72e-07!1;CL:0002159!2.10e-07!13;CL:0000150!7.24e-07!9|ontology_enrichment_celltype_v019=CL:0002251;7.54e-12;20!CL:0002623;1.10e-09;3|ontology_enrichment_celltype_v019_2=CL:0002251,7.40e-12,20;CL:0002623,1.10e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!1.07e-15!14;DOID:3151!1.83e-07!1;DOID:3149!1.83e-07!1|ontology_enrichment_disease_v019=DOID:1749;1.54e-28;14|ontology_enrichment_disease_v019_2=DOID:1749,1.60e-28,14|ontology_enrichment_uberon=UBERON:0000974!1.49e-22!10;UBERON:0003729!1.64e-20!5;UBERON:0000166!5.63e-18!21;UBERON:0000165!1.23e-16!28;UBERON:0000930!1.23e-16!28;UBERON:0000161!5.85e-16!35;UBERON:0003408!7.18e-16!10;UBERON:0003343!5.21e-15!4;UBERON:0004785!5.21e-15!4;UBERON:0000344!6.64e-13!12;UBERON:0001004!3.73e-10!72;UBERON:0001044!4.34e-10!6;UBERON:0003293!4.34e-10!6;UBERON:0003294!4.34e-10!6;UBERON:0010047!4.34e-10!6;UBERON:0000167!4.34e-10!6;UBERON:0003102!8.23e-10!95;UBERON:0006562!3.16e-09!11;UBERON:0001444!4.40e-09!48;UBERON:0004177!9.83e-09!7;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0002370!1.95e-07!4;UBERON:0005058!1.95e-07!4;UBERON:0009113!1.95e-07!4;UBERON:0003295!1.95e-07!4;UBERON:0005562!1.95e-07!4;UBERON:0002372!2.35e-07!1;UBERON:0001961!2.35e-07!1;UBERON:0001744!2.35e-07!1;UBERON:0001735!2.35e-07!1;UBERON:0004119!5.89e-07!169;UBERON:0000925!5.89e-07!169;UBERON:0006595!5.89e-07!169;UBERON:0001708!7.95e-07!4;UBERON:0001704!7.95e-07!4;UBERON:0001007!8.01e-07!155;UBERON:0001555!8.01e-07!155;UBERON:0007026!8.01e-07!155|ontology_enrichment_uberon_v019=UBERON:0002370;1.66e-50;2!UBERON:0005058;1.66e-50;2!UBERON:0009113;1.66e-50;2!UBERON:0003343;1.52e-25;4!UBERON:0004785;1.52e-25;4!UBERON:0004177;6.32e-21;5!UBERON:0005057;6.32e-21;5!UBERON:0000974;2.10e-17;6!UBERON:0000161;1.95e-12;19!UBERON:0000166;1.95e-12;19!UBERON:0000165;1.19e-08;28!UBERON:0003729;1.44e-08;13!UBERON:0000153;6.15e-08;54|ontology_enrichment_uberon_v019_2=UBERON:0000974,6.42e-40,10;UBERON:0002370,6.73e-26,4;UBERON:0005058,6.73e-26,4;UBERON:0009113,6.73e-26,4;UBERON:0003295,6.73e-26,4;UBERON:0005562,6.73e-26,4;UBERON:0003343,1.43e-25,4;UBERON:0004785,1.43e-25,4;UBERON:0003408,3.80e-23,10;UBERON:0003351,1.22e-17,6;UBERON:0004177,2.85e-15,7;UBERON:0005057,2.85e-15,7;UBERON:0001042,5.41e-11,10;UBERON:0009145,5.41e-11,10;UBERON:0000166,7.66e-11,22;UBERON:0000153,2.77e-10,62;UBERON:0007811,2.77e-10,62;UBERON:0006562,4.42e-10,11;UBERON:0009722,4.42e-10,11;UBERON:0007690,4.42e-10,11;UBERON:0001004,1.20e-08,74;UBERON:0003729,1.42e-08,13;UBERON:0000165,2.21e-08,29;UBERON:0000930,2.21e-08,29;UBERON:0000161,7.22e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,2.00548529691159,1.65085738669511,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,3.39252483350749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,2.0668451147522,33.4582710054674,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0|short_description=p7@KIAA0146}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28971 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010lxv.1_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_7_at_KIAA0146_5end | |||
|id=chr8:48585931..48585943,+ | |||
|ontology_enrichment_celltype=CL:0002251!1.34e-22!21;CL:0002623!1.15e-19!3;CL:0002076!2.14e-15!43;CL:0000622!5.17e-12!5;CL:0000223!1.15e-10!59;CL:0000154!4.34e-10!6;CL:0000240!1.78e-09!6;CL:0000311!1.78e-09!6;CL:0000079!1.78e-09!6;CL:0000237!1.78e-09!6;CL:0000036!1.78e-09!6;CL:0000357!1.78e-09!6;CL:0000114!1.78e-09!6;CL:0002166!7.91e-09!3;CL:0002336!1.72e-07!1;CL:0002261!1.72e-07!1;CL:0002170!1.72e-07!1;CL:0002159!2.10e-07!13;CL:0000150!7.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002251;7.54e-12;20!CL:0002623;1.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,7.40e-12,20;CL:0002623,1.10e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.07e-15!14;DOID:3151!1.83e-07!1;DOID:3149!1.83e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.54e-28;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.60e-28,14 | |||
|ontology_enrichment_uberon=UBERON:0000974!1.49e-22!10;UBERON:0003729!1.64e-20!5;UBERON:0000166!5.63e-18!21;UBERON:0000165!1.23e-16!28;UBERON:0000930!1.23e-16!28;UBERON:0000161!5.85e-16!35;UBERON:0003408!7.18e-16!10;UBERON:0003343!5.21e-15!4;UBERON:0004785!5.21e-15!4;UBERON:0000344!6.64e-13!12;UBERON:0001004!3.73e-10!72;UBERON:0001044!4.34e-10!6;UBERON:0003293!4.34e-10!6;UBERON:0003294!4.34e-10!6;UBERON:0010047!4.34e-10!6;UBERON:0000167!4.34e-10!6;UBERON:0003102!8.23e-10!95;UBERON:0006562!3.16e-09!11;UBERON:0001444!4.40e-09!48;UBERON:0004177!9.83e-09!7;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0002370!1.95e-07!4;UBERON:0005058!1.95e-07!4;UBERON:0009113!1.95e-07!4;UBERON:0003295!1.95e-07!4;UBERON:0005562!1.95e-07!4;UBERON:0002372!2.35e-07!1;UBERON:0001961!2.35e-07!1;UBERON:0001744!2.35e-07!1;UBERON:0001735!2.35e-07!1;UBERON:0004119!5.89e-07!169;UBERON:0000925!5.89e-07!169;UBERON:0006595!5.89e-07!169;UBERON:0001708!7.95e-07!4;UBERON:0001704!7.95e-07!4;UBERON:0001007!8.01e-07!155;UBERON:0001555!8.01e-07!155;UBERON:0007026!8.01e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.66e-50;2!UBERON:0005058;1.66e-50;2!UBERON:0009113;1.66e-50;2!UBERON:0003343;1.52e-25;4!UBERON:0004785;1.52e-25;4!UBERON:0004177;6.32e-21;5!UBERON:0005057;6.32e-21;5!UBERON:0000974;2.10e-17;6!UBERON:0000161;1.95e-12;19!UBERON:0000166;1.95e-12;19!UBERON:0000165;1.19e-08;28!UBERON:0003729;1.44e-08;13!UBERON:0000153;6.15e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,6.42e-40,10;UBERON:0002370,6.73e-26,4;UBERON:0005058,6.73e-26,4;UBERON:0009113,6.73e-26,4;UBERON:0003295,6.73e-26,4;UBERON:0005562,6.73e-26,4;UBERON:0003343,1.43e-25,4;UBERON:0004785,1.43e-25,4;UBERON:0003408,3.80e-23,10;UBERON:0003351,1.22e-17,6;UBERON:0004177,2.85e-15,7;UBERON:0005057,2.85e-15,7;UBERON:0001042,5.41e-11,10;UBERON:0009145,5.41e-11,10;UBERON:0000166,7.66e-11,22;UBERON:0000153,2.77e-10,62;UBERON:0007811,2.77e-10,62;UBERON:0006562,4.42e-10,11;UBERON:0009722,4.42e-10,11;UBERON:0007690,4.42e-10,11;UBERON:0001004,1.20e-08,74;UBERON:0003729,1.42e-08,13;UBERON:0000165,2.21e-08,29;UBERON:0000930,2.21e-08,29;UBERON:0000161,7.22e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,2.00548529691159,1.65085738669511,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,3.39252483350749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,2.0668451147522,33.4582710054674,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p7@KIAA0146 | |||
}} |
Revision as of 05:26, 14 September 2013
Short description: | p7@KIAA0146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KIAA0146_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_uc010lxv.1_5end |
EntrezGene: | KIAA0146 |
HGNC: | 28971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 7.40e-12 | 20 |
acinar cell of salivary gland | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
neck | 6.42e-40 | 10 |
thymus | 6.73e-26 | 4 |
hemolymphoid system gland | 6.73e-26 | 4 |
thymic region | 6.73e-26 | 4 |
pharyngeal gland | 6.73e-26 | 4 |
thymus primordium | 6.73e-26 | 4 |
mucosa of oral region | 1.43e-25 | 4 |
respiratory system mucosa | 1.43e-25 | 4 |
gland of gut | 3.80e-23 | 10 |
pharyngeal epithelium | 1.22e-17 | 6 |
hemopoietic organ | 2.85e-15 | 7 |
immune organ | 2.85e-15 | 7 |
chordate pharynx | 5.41e-11 | 10 |
pharyngeal region of foregut | 5.41e-11 | 10 |
oral opening | 7.66e-11 | 22 |
anterior region of body | 2.77e-10 | 62 |
craniocervical region | 2.77e-10 | 62 |
pharynx | 4.42e-10 | 11 |
entire pharyngeal arch endoderm | 4.42e-10 | 11 |
early pharyngeal endoderm | 4.42e-10 | 11 |
respiratory system | 1.20e-08 | 74 |
mouth mucosa | 1.42e-08 | 13 |
mouth | 2.21e-08 | 29 |
stomodeum | 2.21e-08 | 29 |
orifice | 7.22e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.60e-28 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.