FFCP PHASE1:Mm9::chr4:49554145..49554167,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=461|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:49554145..49554167,-|id=chr4:49554145..49554167,-|ontology_enrichment_celltype=CL:0000066!2.04e-07!25;CL:0002563!5.42e-07!9;CL:0002251!5.42e-07!9;CL:0000239!8.06e-07!6;CL:0000677!8.06e-07!6;CL:0000212!8.06e-07!6;CL:0000584!8.06e-07!6|ontology_enrichment_celltype_v019_2=CL:0000066,8.18e-13,25;CL:0000239,7.07e-11,6;CL:0000677,7.07e-11,6;CL:0000584,7.07e-11,6;CL:0000223,8.26e-10,20;CL:0000075,3.27e-09,7;CL:0002563,3.89e-09,9;CL:0002251,3.89e-09,9;CL:0000182,1.43e-07,5;CL:0000682,2.69e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.97e-18!22;UBERON:0007499!3.97e-18!22;UBERON:0006925!3.97e-18!22;UBERON:0009497!3.97e-18!22;UBERON:0000015!3.97e-18!22;UBERON:0002423!3.97e-18!22;UBERON:0006235!3.97e-18!22;UBERON:0008835!3.97e-18!22;UBERON:0003894!3.97e-18!22;UBERON:0004161!3.97e-18!22;UBERON:0008836!3.97e-18!22;UBERON:0009854!5.31e-17!23;UBERON:0009856!5.31e-17!23;UBERON:0002365!4.98e-15!25;UBERON:0002330!4.98e-15!25;UBERON:0005172!3.25e-13!49;UBERON:0005173!3.25e-13!49;UBERON:0002417!3.25e-13!49;UBERON:0000916!3.25e-13!49;UBERON:0000344!1.15e-12!15;UBERON:0000160!1.09e-11!43;UBERON:0001242!1.22e-10!13;UBERON:0000060!1.22e-10!13;UBERON:0001262!1.22e-10!13;UBERON:0004786!1.22e-10!13;UBERON:0001007!4.08e-10!128;UBERON:0001555!4.08e-10!128;UBERON:0007026!4.08e-10!128;UBERON:0004119!1.03e-09!130;UBERON:0000925!1.03e-09!130;UBERON:0006595!1.03e-09!130;UBERON:0003929!3.93e-09!55;UBERON:0004921!5.60e-09!126;UBERON:0004185!5.60e-09!126;UBERON:0005409!9.64e-09!59;UBERON:0009569!2.61e-07!66;UBERON:0005256!4.08e-07!47;UBERON:0003350!5.42e-07!9;UBERON:0004808!5.42e-07!9;UBERON:0001277!5.42e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-22,31;UBERON:0000344,6.97e-19,15;UBERON:0002107,6.10e-18,22;UBERON:0007499,6.10e-18,22;UBERON:0006925,6.10e-18,22;UBERON:0009497,6.10e-18,22;UBERON:0000015,6.10e-18,22;UBERON:0002423,6.10e-18,22;UBERON:0006235,6.10e-18,22;UBERON:0008835,6.10e-18,22;UBERON:0003894,6.10e-18,22;UBERON:0004161,6.10e-18,22;UBERON:0008836,6.10e-18,22;UBERON:0009854,5.51e-17,23;UBERON:0009856,5.51e-17,23;UBERON:0001007,2.59e-16,116;UBERON:0001555,2.59e-16,116;UBERON:0007026,2.59e-16,116;UBERON:0004119,7.07e-16,118;UBERON:0000925,7.07e-16,118;UBERON:0006595,7.07e-16,118;UBERON:0001242,2.24e-15,13;UBERON:0001262,2.24e-15,13;UBERON:0004786,2.24e-15,13;UBERON:0002365,2.64e-15,25;UBERON:0002330,2.64e-15,25;UBERON:0004921,2.69e-14,114;UBERON:0005409,6.70e-13,47;UBERON:0003929,3.93e-12,55;UBERON:0004923,1.28e-10,24;UBERON:0005172,3.50e-10,49;UBERON:0005173,3.50e-10,49;UBERON:0002417,3.50e-10,49;UBERON:0000916,3.50e-10,49;UBERON:0000490,3.55e-09,66;UBERON:0003350,3.89e-09,9;UBERON:0004808,3.89e-09,9;UBERON:0001277,3.89e-09,9;UBERON:0005911,1.53e-08,69;UBERON:0002108,1.09e-07,4;UBERON:0000485,2.80e-07,11;UBERON:0003104,2.95e-07,61;UBERON:0009142,2.95e-07,61;UBERON:0005256,8.04e-07,45|phase1_expression=0,5.58360652222978,5.91499011206397,3.93203474698879,5.00895729946347,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,6.55968933452967,5.73523202667925,12.0588712464154,6.03066794622705,7.54149314400612,6.27077284206034,3.02436155711917,2.21730510655305,0,0,0,0,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,19.7191686775248,22.6675340487883,9.74664626171504,8.96053774194671,3.37066608316204,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93005079161115,2.11560453330835,0,0,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,1.42358718463353,2.14108641141214,1.75934646160189,1.39269530428806,1.36474860983384,2.69645822596266,2.59365659849633,3.58454291857861,0,0,0,1.01825663922657,0.581857461502877,0.911765658574141,0.69560190836683,4.13308414342886,3.92496819603437,4.44229790118482,5.92905254174298,0.166845105716094,0.393117990226406,0.899448449539415,0.202860121388503,0.482354319504834,0.25462585178142,4.31544206176216,4.21551589615092,4.66754402419738,28.7536413054709,4.46569137202204,5.61667811606209,2.77836765741823,3.04975602987251,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr4:49554145..49554167,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=461 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:49554145..49554167,- | |||
|id=chr4:49554145..49554167,- | |||
|ontology_enrichment_celltype=CL:0000066!2.04e-07!25;CL:0002563!5.42e-07!9;CL:0002251!5.42e-07!9;CL:0000239!8.06e-07!6;CL:0000677!8.06e-07!6;CL:0000212!8.06e-07!6;CL:0000584!8.06e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.18e-13,25;CL:0000239,7.07e-11,6;CL:0000677,7.07e-11,6;CL:0000584,7.07e-11,6;CL:0000223,8.26e-10,20;CL:0000075,3.27e-09,7;CL:0002563,3.89e-09,9;CL:0002251,3.89e-09,9;CL:0000182,1.43e-07,5;CL:0000682,2.69e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.97e-18!22;UBERON:0007499!3.97e-18!22;UBERON:0006925!3.97e-18!22;UBERON:0009497!3.97e-18!22;UBERON:0000015!3.97e-18!22;UBERON:0002423!3.97e-18!22;UBERON:0006235!3.97e-18!22;UBERON:0008835!3.97e-18!22;UBERON:0003894!3.97e-18!22;UBERON:0004161!3.97e-18!22;UBERON:0008836!3.97e-18!22;UBERON:0009854!5.31e-17!23;UBERON:0009856!5.31e-17!23;UBERON:0002365!4.98e-15!25;UBERON:0002330!4.98e-15!25;UBERON:0005172!3.25e-13!49;UBERON:0005173!3.25e-13!49;UBERON:0002417!3.25e-13!49;UBERON:0000916!3.25e-13!49;UBERON:0000344!1.15e-12!15;UBERON:0000160!1.09e-11!43;UBERON:0001242!1.22e-10!13;UBERON:0000060!1.22e-10!13;UBERON:0001262!1.22e-10!13;UBERON:0004786!1.22e-10!13;UBERON:0001007!4.08e-10!128;UBERON:0001555!4.08e-10!128;UBERON:0007026!4.08e-10!128;UBERON:0004119!1.03e-09!130;UBERON:0000925!1.03e-09!130;UBERON:0006595!1.03e-09!130;UBERON:0003929!3.93e-09!55;UBERON:0004921!5.60e-09!126;UBERON:0004185!5.60e-09!126;UBERON:0005409!9.64e-09!59;UBERON:0009569!2.61e-07!66;UBERON:0005256!4.08e-07!47;UBERON:0003350!5.42e-07!9;UBERON:0004808!5.42e-07!9;UBERON:0001277!5.42e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-22,31;UBERON:0000344,6.97e-19,15;UBERON:0002107,6.10e-18,22;UBERON:0007499,6.10e-18,22;UBERON:0006925,6.10e-18,22;UBERON:0009497,6.10e-18,22;UBERON:0000015,6.10e-18,22;UBERON:0002423,6.10e-18,22;UBERON:0006235,6.10e-18,22;UBERON:0008835,6.10e-18,22;UBERON:0003894,6.10e-18,22;UBERON:0004161,6.10e-18,22;UBERON:0008836,6.10e-18,22;UBERON:0009854,5.51e-17,23;UBERON:0009856,5.51e-17,23;UBERON:0001007,2.59e-16,116;UBERON:0001555,2.59e-16,116;UBERON:0007026,2.59e-16,116;UBERON:0004119,7.07e-16,118;UBERON:0000925,7.07e-16,118;UBERON:0006595,7.07e-16,118;UBERON:0001242,2.24e-15,13;UBERON:0001262,2.24e-15,13;UBERON:0004786,2.24e-15,13;UBERON:0002365,2.64e-15,25;UBERON:0002330,2.64e-15,25;UBERON:0004921,2.69e-14,114;UBERON:0005409,6.70e-13,47;UBERON:0003929,3.93e-12,55;UBERON:0004923,1.28e-10,24;UBERON:0005172,3.50e-10,49;UBERON:0005173,3.50e-10,49;UBERON:0002417,3.50e-10,49;UBERON:0000916,3.50e-10,49;UBERON:0000490,3.55e-09,66;UBERON:0003350,3.89e-09,9;UBERON:0004808,3.89e-09,9;UBERON:0001277,3.89e-09,9;UBERON:0005911,1.53e-08,69;UBERON:0002108,1.09e-07,4;UBERON:0000485,2.80e-07,11;UBERON:0003104,2.95e-07,61;UBERON:0009142,2.95e-07,61;UBERON:0005256,8.04e-07,45 | |||
|phase1_expression=0,5.58360652222978,5.91499011206397,3.93203474698879,5.00895729946347,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,6.55968933452967,5.73523202667925,12.0588712464154,6.03066794622705,7.54149314400612,6.27077284206034,3.02436155711917,2.21730510655305,0,0,0,0,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,19.7191686775248,22.6675340487883,9.74664626171504,8.96053774194671,3.37066608316204,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93005079161115,2.11560453330835,0,0,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,1.42358718463353,2.14108641141214,1.75934646160189,1.39269530428806,1.36474860983384,2.69645822596266,2.59365659849633,3.58454291857861,0,0,0,1.01825663922657,0.581857461502877,0.911765658574141,0.69560190836683,4.13308414342886,3.92496819603437,4.44229790118482,5.92905254174298,0.166845105716094,0.393117990226406,0.899448449539415,0.202860121388503,0.482354319504834,0.25462585178142,4.31544206176216,4.21551589615092,4.66754402419738,28.7536413054709,4.46569137202204,5.61667811606209,2.77836765741823,3.04975602987251,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:49554145..49554167,- | |||
}} |
Revision as of 05:12, 14 September 2013
Short description: | p@chr4:49554145..49554167, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49554145..49554167, - |
Coexpression cluster: | MCL_coexpression_mm9:461 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.18e-13 | 25 |
brush border epithelial cell | 7.07e-11 | 6 |
gut absorptive cell | 7.07e-11 | 6 |
enterocyte | 7.07e-11 | 6 |
endodermal cell | 8.26e-10 | 20 |
columnar/cuboidal epithelial cell | 3.27e-09 | 7 |
intestinal epithelial cell | 3.89e-09 | 9 |
epithelial cell of alimentary canal | 3.89e-09 | 9 |
hepatocyte | 1.43e-07 | 5 |
M cell of gut | 2.69e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.