FFCP PHASE1:Mm9::chr4:43575169..43575180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21894|HGNC=|MCL_coexpression_id=3|UniProt=P26039|association_with_transcript=113bp_to_ENSMUST00000030187_5end|description=CAGE_peak_6_at_Tln1_5end|id=chr4:43575169..43575180,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.61e-10!48;UBERON:0002390!2.10e-09!45;UBERON:0003061!2.10e-09!45;UBERON:0002405!7.01e-09!70;UBERON:0000926!8.41e-09!193;UBERON:0004120!8.41e-09!193;UBERON:0006603!8.41e-09!193;UBERON:0003081!8.85e-07!88;UBERON:0004177!9.15e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.01e-11,45;UBERON:0003061,3.01e-11,45;UBERON:0002193,3.31e-11,48;UBERON:0002405,3.31e-11,48;UBERON:0004177,1.12e-07,29;UBERON:0005057,1.12e-07,29;UBERON:0003081,1.45e-07,87;UBERON:0000926,1.67e-07,120;UBERON:0004120,1.67e-07,120;UBERON:0006603,1.67e-07,120;UBERON:0000077,1.84e-07,35;UBERON:0001041,7.30e-07,80|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,0.60492842261366,0.500895729946347,0.16787927191189,0.467225281191051,3.22808308603941,0.281577444303333,0.936258105287974,0.856089841127525,1.11681022593471,3.76641605848653,4.02133851127388,1.66554880907831,1.21485160433896,3.49780939064073,1.41957974411207,1.23402990245165,0.42438965179803,1.36069264241712,0.794327609607082,1.04479915655574,0.95995453676044,1.14704640533585,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0.635030673459631,1.23012957516914,0,0.866554859253824,0.166234645358492,0.204169356262369,7.53356935326434,10.1573594788094,7.85285615960697,11.1763982725893,14.3439551841274,7.2826552954673,0.251793635951155,0.608261587317087,0.550640256485045,1.56478268869608,1.74420125104357,2.41654801007919,0.777719596297134,0.979904951377538,1.43752564364972,1.00669563634642,2.90144856804538,1.34437519656986,1.80081605225163,0.286533439938757,1.03134418455488,0.202316460859598,0,0,2.03306719241479,0.889294796111139,3.1496490104849,4.94433181283487,2.1314403448383,1.19840044207362,1.15265491596466,0.829516898467821,0.405017814995072,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.307213066512487,0,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.757261933331841,1.73814588245607,2.89864488701678,0.860423876981386,0,0,1.29955283489534,0.448026887097336,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.68510327831436,2.07150306917737,2.07818994690755,1.21439728736295,0.304465478312141,1.84492397804847,1.20578112442098,1.41106448562846,0.879666139307728,2.71914464507811,1.3013942122792,9.73071607144862,1.94120219936891,1.32504911076236,0.484875253135222,0,0.585561594023094,0.209446706813455,0.766371165625774,1.07833612055328,0.599902730993408,0.762421362438388,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,1.32391173005411,1.61729061793121,0,1.68353484709179,0.390361328888111,0.229902104433473,0,0.90422890701429,0.340182495756639,0.512454881139399,0.187403449119458,0.776110112217047,0.431135985865684,0.945530400839096,0.175951124163949,0,1.66828349535359,0.348252166522167,0.823128545631774,0.59710280045548,1.40442637462647,0,1.42081749697796,1.24275463521301,0.469052119962192,0.720248245844059,1.18372367792605,0.196764231747404,0.617068451549513,1.16266972375204,1.07309360559848,0.817357396570186,0.822799249567402,0.656669856316381,1.21603214318784,0.584799949701329,1.3173006917463,1.20785776884335,0.420579897128254,0,0.660837565967596,0.793351699990633,1.06644125267617,0.928946687441754,1.03093969057675,0.403367049246685,1.55664630691409,1.52180500890047,0.474529061544512,0.823494773620054,0.502670417600539,0.596869416123452,0.779856348476481,2.69645822596266,1.29682829924817,0.597423819763102,0.758671603812327,0.913988100877831,4.50830942692322,0.814605311381257,1.16371492300575,0.420814919341911,1.3279672796094,1.32849133181642,1.56998727841375,0.863780147452604,0.296452627087149,1.66845105716094,0.589676985339609,2.02375901146368,1.62288097110802,1.92941727801933,2.03700681425136,1.72617682470486,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,0.538192240565737,0,1.47802552133284,0.757965647081939,1.14075483509418,1.01847051465113,1.40814148973101,2.01007508930179,1.19021820443007,0.780534591431195,1.7339865851681,2.21464689648775,3.34855014180723,2.29408640602033,3.45369963731791,1.59113964439663,3.01582567878545,1.63171705145613,1.96705709207614,0.275936746304732,0.481651769963376,0.586058432961016,0.655739781506702,0.252470927204373,1.26203287766503,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,1.61924280669958,1.46127928955656,1.18586333383957,0,0.99358059645788,1.06839362200353,1.14020871547503,1.15479086080775,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,1.84461088766356,0.775284879504663,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,0.36012218806262,1.03486947026204,0.214337035031592,0.354680467284547,0,1.15184314421485,0.608929898229199,2.3467170806371,0.63549621259146,0.661585194164886,2.14352128823924,0.645857706783622,1.02531972377865,1.43246812803764,1.31312719796049,0.582961673259701,0.927126510052548,1.87957968877638,2.68302928352189,1.85194527369712,2.26042148405629,3.00727300986255,1.60144721244566,1.35982743995084,0.559805809294632,1.10559979043539,0,1.10717597753397,1.01659733563424,1.29606408986162,1.04544148007234,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,1.03691978633434,0,1.69107881605257,1.19613236835183,0.992750942742586,0.583353565032143,1.03327858782185,0.844780627453891,0.469428954583016,0.911430693907651,0.734015410979976,0.241584120826006,1.15212002503146,3.79213344753814,1.01362607645082,0.718976700153791,1.29920822977795,1.79026695667481,3.17890167650024,2.40390899039938,2.51072196196781,3.23092639834072,2.59103142626999,3.52891647978942,2.82627854145282,2.30908419936791,2.33753804363138,0.453460767230423,1.33191572024439,1.88399098879899,1.34307693091263,1.73870634628971,1.12609485270709,1.83151624267265,0.214368379079066,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0.51776031175182,0.726511433089237,0.798049746802062,0.170733605754134,1.45864030240976,0.628839487883947,1.2869045591501,2.00022055021454,1.03017528619447,1.92551525755089,1.26348605881899,1.2673964994512,0.754505365544305,1.12369808963859,0.576226371643824,0.746661096422973,0,0.927074607558844,1.54327376370964,1.23625770240992,0.883193520806384,1.37147700954166,1.06485483695602,0,1.59881058295561,1.31753132581463,1.01537529470012,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.830445126869219,1.0835493061312,0.818462086339379,0.929621047115796,1.15743966588685,1.24905288968973,1.40358965067245,0.429742108096597,1.14772999241306,0.661774257358546,0.927471342481686|short_description=p6@Tln1}} | ||
|EntrezGene=21894 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=P26039 | |||
|association_with_transcript=113bp_to_ENSMUST00000030187_5end | |||
|description=CAGE_peak_6_at_Tln1_5end | |||
|id=chr4:43575169..43575180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.61e-10!48;UBERON:0002390!2.10e-09!45;UBERON:0003061!2.10e-09!45;UBERON:0002405!7.01e-09!70;UBERON:0000926!8.41e-09!193;UBERON:0004120!8.41e-09!193;UBERON:0006603!8.41e-09!193;UBERON:0003081!8.85e-07!88;UBERON:0004177!9.15e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.01e-11,45;UBERON:0003061,3.01e-11,45;UBERON:0002193,3.31e-11,48;UBERON:0002405,3.31e-11,48;UBERON:0004177,1.12e-07,29;UBERON:0005057,1.12e-07,29;UBERON:0003081,1.45e-07,87;UBERON:0000926,1.67e-07,120;UBERON:0004120,1.67e-07,120;UBERON:0006603,1.67e-07,120;UBERON:0000077,1.84e-07,35;UBERON:0001041,7.30e-07,80 | |||
|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,0.60492842261366,0.500895729946347,0.16787927191189,0.467225281191051,3.22808308603941,0.281577444303333,0.936258105287974,0.856089841127525,1.11681022593471,3.76641605848653,4.02133851127388,1.66554880907831,1.21485160433896,3.49780939064073,1.41957974411207,1.23402990245165,0.42438965179803,1.36069264241712,0.794327609607082,1.04479915655574,0.95995453676044,1.14704640533585,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0.635030673459631,1.23012957516914,0,0.866554859253824,0.166234645358492,0.204169356262369,7.53356935326434,10.1573594788094,7.85285615960697,11.1763982725893,14.3439551841274,7.2826552954673,0.251793635951155,0.608261587317087,0.550640256485045,1.56478268869608,1.74420125104357,2.41654801007919,0.777719596297134,0.979904951377538,1.43752564364972,1.00669563634642,2.90144856804538,1.34437519656986,1.80081605225163,0.286533439938757,1.03134418455488,0.202316460859598,0,0,2.03306719241479,0.889294796111139,3.1496490104849,4.94433181283487,2.1314403448383,1.19840044207362,1.15265491596466,0.829516898467821,0.405017814995072,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.307213066512487,0,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.757261933331841,1.73814588245607,2.89864488701678,0.860423876981386,0,0,1.29955283489534,0.448026887097336,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.68510327831436,2.07150306917737,2.07818994690755,1.21439728736295,0.304465478312141,1.84492397804847,1.20578112442098,1.41106448562846,0.879666139307728,2.71914464507811,1.3013942122792,9.73071607144862,1.94120219936891,1.32504911076236,0.484875253135222,0,0.585561594023094,0.209446706813455,0.766371165625774,1.07833612055328,0.599902730993408,0.762421362438388,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,1.32391173005411,1.61729061793121,0,1.68353484709179,0.390361328888111,0.229902104433473,0,0.90422890701429,0.340182495756639,0.512454881139399,0.187403449119458,0.776110112217047,0.431135985865684,0.945530400839096,0.175951124163949,0,1.66828349535359,0.348252166522167,0.823128545631774,0.59710280045548,1.40442637462647,0,1.42081749697796,1.24275463521301,0.469052119962192,0.720248245844059,1.18372367792605,0.196764231747404,0.617068451549513,1.16266972375204,1.07309360559848,0.817357396570186,0.822799249567402,0.656669856316381,1.21603214318784,0.584799949701329,1.3173006917463,1.20785776884335,0.420579897128254,0,0.660837565967596,0.793351699990633,1.06644125267617,0.928946687441754,1.03093969057675,0.403367049246685,1.55664630691409,1.52180500890047,0.474529061544512,0.823494773620054,0.502670417600539,0.596869416123452,0.779856348476481,2.69645822596266,1.29682829924817,0.597423819763102,0.758671603812327,0.913988100877831,4.50830942692322,0.814605311381257,1.16371492300575,0.420814919341911,1.3279672796094,1.32849133181642,1.56998727841375,0.863780147452604,0.296452627087149,1.66845105716094,0.589676985339609,2.02375901146368,1.62288097110802,1.92941727801933,2.03700681425136,1.72617682470486,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,0.538192240565737,0,1.47802552133284,0.757965647081939,1.14075483509418,1.01847051465113,1.40814148973101,2.01007508930179,1.19021820443007,0.780534591431195,1.7339865851681,2.21464689648775,3.34855014180723,2.29408640602033,3.45369963731791,1.59113964439663,3.01582567878545,1.63171705145613,1.96705709207614,0.275936746304732,0.481651769963376,0.586058432961016,0.655739781506702,0.252470927204373,1.26203287766503,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,1.61924280669958,1.46127928955656,1.18586333383957,0,0.99358059645788,1.06839362200353,1.14020871547503,1.15479086080775,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,1.84461088766356,0.775284879504663,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,0.36012218806262,1.03486947026204,0.214337035031592,0.354680467284547,0,1.15184314421485,0.608929898229199,2.3467170806371,0.63549621259146,0.661585194164886,2.14352128823924,0.645857706783622,1.02531972377865,1.43246812803764,1.31312719796049,0.582961673259701,0.927126510052548,1.87957968877638,2.68302928352189,1.85194527369712,2.26042148405629,3.00727300986255,1.60144721244566,1.35982743995084,0.559805809294632,1.10559979043539,0,1.10717597753397,1.01659733563424,1.29606408986162,1.04544148007234,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,1.03691978633434,0,1.69107881605257,1.19613236835183,0.992750942742586,0.583353565032143,1.03327858782185,0.844780627453891,0.469428954583016,0.911430693907651,0.734015410979976,0.241584120826006,1.15212002503146,3.79213344753814,1.01362607645082,0.718976700153791,1.29920822977795,1.79026695667481,3.17890167650024,2.40390899039938,2.51072196196781,3.23092639834072,2.59103142626999,3.52891647978942,2.82627854145282,2.30908419936791,2.33753804363138,0.453460767230423,1.33191572024439,1.88399098879899,1.34307693091263,1.73870634628971,1.12609485270709,1.83151624267265,0.214368379079066,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0.51776031175182,0.726511433089237,0.798049746802062,0.170733605754134,1.45864030240976,0.628839487883947,1.2869045591501,2.00022055021454,1.03017528619447,1.92551525755089,1.26348605881899,1.2673964994512,0.754505365544305,1.12369808963859,0.576226371643824,0.746661096422973,0,0.927074607558844,1.54327376370964,1.23625770240992,0.883193520806384,1.37147700954166,1.06485483695602,0,1.59881058295561,1.31753132581463,1.01537529470012,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.830445126869219,1.0835493061312,0.818462086339379,0.929621047115796,1.15743966588685,1.24905288968973,1.40358965067245,0.429742108096597,1.14772999241306,0.661774257358546,0.927471342481686 | |||
|short_description=p6@Tln1 | |||
}} | |||
Revision as of 05:02, 14 September 2013
| Short description: | p6@Tln1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Tln1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 113bp_to_ENSMUST00000030187_5end |
| EntrezGene: | Tln1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.01e-11 | 45 |
| blood island | 3.01e-11 | 45 |
| hemolymphoid system | 3.31e-11 | 48 |
| immune system | 3.31e-11 | 48 |
| hemopoietic organ | 1.12e-07 | 29 |
| immune organ | 1.12e-07 | 29 |
| lateral plate mesoderm | 1.45e-07 | 87 |
| mesoderm | 1.67e-07 | 120 |
| mesoderm-derived structure | 1.67e-07 | 120 |
| presumptive mesoderm | 1.67e-07 | 120 |
| mixed endoderm/mesoderm-derived structure | 1.84e-07 | 35 |
| foregut | 7.30e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
