FFCP PHASE1:Mm9::chr4:134936726..134936754,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=560|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:134936726..134936754,-|id=chr4:134936726..134936754,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,1.63e-10,2;CL:0002612,7.34e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!7.19e-10!6;UBERON:0005174!7.19e-10!6;UBERON:0001137!7.19e-10!6;UBERON:0003076!4.02e-09!12;UBERON:0003057!4.02e-09!12;UBERON:0001948!2.28e-08!5;UBERON:0002315!2.28e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.04e-19,6;UBERON:0005174,4.04e-19,6;UBERON:0001137,4.04e-19,6;UBERON:0001948,5.14e-15,5;UBERON:0002315,5.14e-15,5;UBERON:0002256,1.63e-10,2;UBERON:0000489,7.93e-10,21;UBERON:0003076,1.76e-09,12;UBERON:0003057,1.76e-09,12;UBERON:0000014,3.09e-08,5;UBERON:0001003,3.09e-08,5;UBERON:0002097,3.09e-08,5;UBERON:0002199,3.09e-08,5;UBERON:0007029,3.09e-08,5;UBERON:0007376,3.09e-08,5;UBERON:0002416,3.09e-08,5;UBERON:0007383,3.09e-08,5;UBERON:0002257,7.34e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28476476605705,16.565140571371,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,3.24091444021034,3.55929201997757,0.186399445825301,8.40560745998343,0.604572480854284,0,0,0,0,0,0,1.68533304158102,0,0,0,4.64783285263046,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,1.13236794963186,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.324482526135515,0,1.36847667671102,3.28539585963777,0.841767423545896,0,0,0,0,0,0.640568601424249,0.655912071918102,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0.81931657357869,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,6.81671503451807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.913394847343798,0,0.21183207086382,0.661585194164886,1.48397627647332,0,0.301564624640779,1.43246812803764,1.80554989719567,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.194915761479505,0,0,3.62768613784338,0,0.0897138566094757,0,0.386379188064381,0,0,0.428736758158132,0,0.564751842617067,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.644613162144895,1.14772999241306,8.16188250742207,9.04284558919644|short_description=p@chr4:134936726..134936754,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=560 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:134936726..134936754,- | |||
|id=chr4:134936726..134936754,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.63e-10,2;CL:0002612,7.34e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!7.19e-10!6;UBERON:0005174!7.19e-10!6;UBERON:0001137!7.19e-10!6;UBERON:0003076!4.02e-09!12;UBERON:0003057!4.02e-09!12;UBERON:0001948!2.28e-08!5;UBERON:0002315!2.28e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.04e-19,6;UBERON:0005174,4.04e-19,6;UBERON:0001137,4.04e-19,6;UBERON:0001948,5.14e-15,5;UBERON:0002315,5.14e-15,5;UBERON:0002256,1.63e-10,2;UBERON:0000489,7.93e-10,21;UBERON:0003076,1.76e-09,12;UBERON:0003057,1.76e-09,12;UBERON:0000014,3.09e-08,5;UBERON:0001003,3.09e-08,5;UBERON:0002097,3.09e-08,5;UBERON:0002199,3.09e-08,5;UBERON:0007029,3.09e-08,5;UBERON:0007376,3.09e-08,5;UBERON:0002416,3.09e-08,5;UBERON:0007383,3.09e-08,5;UBERON:0002257,7.34e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28476476605705,16.565140571371,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,3.24091444021034,3.55929201997757,0.186399445825301,8.40560745998343,0.604572480854284,0,0,0,0,0,0,1.68533304158102,0,0,0,4.64783285263046,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,1.13236794963186,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.324482526135515,0,1.36847667671102,3.28539585963777,0.841767423545896,0,0,0,0,0,0.640568601424249,0.655912071918102,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0.81931657357869,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,6.81671503451807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.913394847343798,0,0.21183207086382,0.661585194164886,1.48397627647332,0,0.301564624640779,1.43246812803764,1.80554989719567,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.194915761479505,0,0,3.62768613784338,0,0.0897138566094757,0,0.386379188064381,0,0,0.428736758158132,0,0.564751842617067,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.644613162144895,1.14772999241306,8.16188250742207,9.04284558919644 | |||
|short_description=p@chr4:134936726..134936754,- | |||
}} |
Revision as of 04:06, 14 September 2013
Short description: | p@chr4:134936726..134936754, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134936726..134936754, - |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.63e-10 | 2 |
neuron of the ventral spinal cord | 7.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.04e-19 | 6 |
dorsal region element | 4.04e-19 | 6 |
dorsum | 4.04e-19 | 6 |
regional part of spinal cord | 5.14e-15 | 5 |
gray matter of spinal cord | 5.14e-15 | 5 |
dorsal horn of spinal cord | 1.63e-10 | 2 |
cavitated compound organ | 7.93e-10 | 21 |
posterior neural tube | 1.76e-09 | 12 |
chordal neural plate | 1.76e-09 | 12 |
zone of skin | 3.09e-08 | 5 |
skin epidermis | 3.09e-08 | 5 |
skin of body | 3.09e-08 | 5 |
integument | 3.09e-08 | 5 |
surface | 3.09e-08 | 5 |
outer epithelium | 3.09e-08 | 5 |
integumental system | 3.09e-08 | 5 |
enveloping layer of ectoderm | 3.09e-08 | 5 |
ventral horn of spinal cord | 7.34e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.