FFCP PHASE1:Mm9::chr4:119310309..119310326,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14915|HGNC=|MCL_coexpression_id=424|UniProt=P33680|association_with_transcript=0bp_to_ENSMUST00000024015_5end|description=CAGE_peak_1_at_Guca2a_5end|id=chr4:119310309..119310326,+|ontology_enrichment_celltype=CL:0002563!7.18e-08!9;CL:0002251!7.18e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,9.61e-10,9;CL:0002251,9.61e-10,9;CL:0000239,2.33e-07,6;CL:0000677,2.33e-07,6;CL:0000584,2.33e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.73e-19!43;UBERON:0005409!1.63e-17!59;UBERON:0000344!1.17e-12!15;UBERON:0001242!4.57e-11!13;UBERON:0000060!4.57e-11!13;UBERON:0001262!4.57e-11!13;UBERON:0004786!4.57e-11!13;UBERON:0004119!4.22e-10!130;UBERON:0000925!4.22e-10!130;UBERON:0006595!4.22e-10!130;UBERON:0001007!2.40e-09!128;UBERON:0001555!2.40e-09!128;UBERON:0007026!2.40e-09!128;UBERON:0004921!2.11e-08!126;UBERON:0004185!2.11e-08!126;UBERON:0004923!2.90e-08!24;UBERON:0003350!7.18e-08!9;UBERON:0004808!7.18e-08!9;UBERON:0001277!7.18e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.00e-27,31;UBERON:0005409,1.18e-19,47;UBERON:0000344,6.06e-16,15;UBERON:0001242,6.99e-14,13;UBERON:0001262,6.99e-14,13;UBERON:0004786,6.99e-14,13;UBERON:0004923,2.44e-10,24;UBERON:0003350,9.61e-10,9;UBERON:0004808,9.61e-10,9;UBERON:0001277,9.61e-10,9;UBERON:0000485,1.82e-07,11|phase1_expression=0,2570.20387726389,2718.16545611309,501.788126558031,536.960222502484,1948.07107126557,2261.37036096469,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,1759.75665830468,2671.01225946506,4309.61089068323,3617.10848174775,3043.53116168818,5262.50857842482,4621.98054966737,7004.02337057977,0,0,0,90.4105569821489,216.936212192832,84.1177747800961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0,0.679971333707751,0,0,0,89.4630956239259,0,0,0,0,0,0,0,0,0,0,359.679221115039,0,0,0,0,0,0.301445281105245,0.352766121407114,0,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0,9200.29733372651,0,0,1148.02400610741,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,74.0138073883708,636.003612825824,0,0.232236671860439,54.1243337552792,201.481841098719,486.118403844887,1106.35224147064,829.002270518262,1953.82369989094,1129.24909313961,1179.41396625994,1237.63202503217,740.627192731078,1925.35774828378,2034.82553011312,1.70701110857774,2.28497025219458,5.63538678365402,10.7935203758017,9.50367187121366,4.69909993265134,4.04713837595247,5.46157547524528,7.69293766422737,9.13139013021324,4.74324203339438,0.166845105716094,0.589676985339609,0,0,0,1.01850340712568,0,0,0.274561413188081,0,0,0,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,1.21390318077491,1.81394134178851,0.565815239267694,1.18120757152309,0.614870295887855,14.7304127105886,0.363533729477506,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,936.340115174204,4.44847348814022,0,7.25499512942512,0.322928853391811,0.241251699712623,0.477489376012546,1.14898629821543,1023.09773657078,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,11.9885928312199,3.76358932826044,9.17122767733946,1.07891477107857,0.495920734352016,0.26175594198403,6095.27373401985,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.480781798079875,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,1.54551675225752,9.75948872346146,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.67417388775123,1.25767897576789,6.25067928730048,31.781282075631,27.8147327272507,34.9801938455079,34.1141235881127,32.6988296858409,30.3688409631583,23.5040183749405,23.8173566946114,23.3762358649346,29.0539151682675,20.3956413662946,16.5901929598786,23.9009822465918,26.2014077839227,42.5157872957915,25.3790402807853,25.274236134416,34.4471007418619,26.7270640379539,29.022810506845,22.8659966090966,26.3069711437843,26.481802199943,29.7405403978601,23.6083686067107,19.6023919927371,23.735400503842,27.7336945722879,27.7785519812844,0,48.6577745566449,62.7423477821031,1.53030665655075,1.98532277207564,1.15933917810211|short_description=p1@Guca2a}} | ||
|EntrezGene=14915 | |||
|HGNC= | |||
|MCL_coexpression_id=424 | |||
|UniProt=P33680 | |||
|association_with_transcript=0bp_to_ENSMUST00000024015_5end | |||
|description=CAGE_peak_1_at_Guca2a_5end | |||
|id=chr4:119310309..119310326,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.18e-08!9;CL:0002251!7.18e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.61e-10,9;CL:0002251,9.61e-10,9;CL:0000239,2.33e-07,6;CL:0000677,2.33e-07,6;CL:0000584,2.33e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.73e-19!43;UBERON:0005409!1.63e-17!59;UBERON:0000344!1.17e-12!15;UBERON:0001242!4.57e-11!13;UBERON:0000060!4.57e-11!13;UBERON:0001262!4.57e-11!13;UBERON:0004786!4.57e-11!13;UBERON:0004119!4.22e-10!130;UBERON:0000925!4.22e-10!130;UBERON:0006595!4.22e-10!130;UBERON:0001007!2.40e-09!128;UBERON:0001555!2.40e-09!128;UBERON:0007026!2.40e-09!128;UBERON:0004921!2.11e-08!126;UBERON:0004185!2.11e-08!126;UBERON:0004923!2.90e-08!24;UBERON:0003350!7.18e-08!9;UBERON:0004808!7.18e-08!9;UBERON:0001277!7.18e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.00e-27,31;UBERON:0005409,1.18e-19,47;UBERON:0000344,6.06e-16,15;UBERON:0001242,6.99e-14,13;UBERON:0001262,6.99e-14,13;UBERON:0004786,6.99e-14,13;UBERON:0004923,2.44e-10,24;UBERON:0003350,9.61e-10,9;UBERON:0004808,9.61e-10,9;UBERON:0001277,9.61e-10,9;UBERON:0000485,1.82e-07,11 | |||
|phase1_expression=0,2570.20387726389,2718.16545611309,501.788126558031,536.960222502484,1948.07107126557,2261.37036096469,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,1759.75665830468,2671.01225946506,4309.61089068323,3617.10848174775,3043.53116168818,5262.50857842482,4621.98054966737,7004.02337057977,0,0,0,90.4105569821489,216.936212192832,84.1177747800961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0,0.679971333707751,0,0,0,89.4630956239259,0,0,0,0,0,0,0,0,0,0,359.679221115039,0,0,0,0,0,0.301445281105245,0.352766121407114,0,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0,9200.29733372651,0,0,1148.02400610741,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,74.0138073883708,636.003612825824,0,0.232236671860439,54.1243337552792,201.481841098719,486.118403844887,1106.35224147064,829.002270518262,1953.82369989094,1129.24909313961,1179.41396625994,1237.63202503217,740.627192731078,1925.35774828378,2034.82553011312,1.70701110857774,2.28497025219458,5.63538678365402,10.7935203758017,9.50367187121366,4.69909993265134,4.04713837595247,5.46157547524528,7.69293766422737,9.13139013021324,4.74324203339438,0.166845105716094,0.589676985339609,0,0,0,1.01850340712568,0,0,0.274561413188081,0,0,0,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,1.21390318077491,1.81394134178851,0.565815239267694,1.18120757152309,0.614870295887855,14.7304127105886,0.363533729477506,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,936.340115174204,4.44847348814022,0,7.25499512942512,0.322928853391811,0.241251699712623,0.477489376012546,1.14898629821543,1023.09773657078,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,11.9885928312199,3.76358932826044,9.17122767733946,1.07891477107857,0.495920734352016,0.26175594198403,6095.27373401985,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.480781798079875,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,1.54551675225752,9.75948872346146,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.67417388775123,1.25767897576789,6.25067928730048,31.781282075631,27.8147327272507,34.9801938455079,34.1141235881127,32.6988296858409,30.3688409631583,23.5040183749405,23.8173566946114,23.3762358649346,29.0539151682675,20.3956413662946,16.5901929598786,23.9009822465918,26.2014077839227,42.5157872957915,25.3790402807853,25.274236134416,34.4471007418619,26.7270640379539,29.022810506845,22.8659966090966,26.3069711437843,26.481802199943,29.7405403978601,23.6083686067107,19.6023919927371,23.735400503842,27.7336945722879,27.7785519812844,0,48.6577745566449,62.7423477821031,1.53030665655075,1.98532277207564,1.15933917810211 | |||
|short_description=p1@Guca2a | |||
}} |
Revision as of 03:37, 14 September 2013
Short description: | p1@Guca2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Guca2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | 0bp_to_ENSMUST00000024015_5end |
EntrezGene: | Guca2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.61e-10 | 9 |
epithelial cell of alimentary canal | 9.61e-10 | 9 |
brush border epithelial cell | 2.33e-07 | 6 |
gut absorptive cell | 2.33e-07 | 6 |
enterocyte | 2.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.00e-27 | 31 |
gastrointestinal system | 1.18e-19 | 47 |
mucosa | 6.06e-16 | 15 |
intestinal mucosa | 6.99e-14 | 13 |
wall of intestine | 6.99e-14 | 13 |
gastrointestinal system mucosa | 6.99e-14 | 13 |
organ component layer | 2.44e-10 | 24 |
epithelium of mucosa | 9.61e-10 | 9 |
gastrointestinal system epithelium | 9.61e-10 | 9 |
intestinal epithelium | 9.61e-10 | 9 |
simple columnar epithelium | 1.82e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.