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FFCP PHASE1:Mm9::chr4:119032391..119032415,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=73332|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=0bp_to_ENSMUST00000154606_5end|description=CAGE_peak_4_at_Ccdc30_5end|id=chr4:119032391..119032415,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,3.40e-07,9;CL:0000789,3.40e-07,9;CL:0002420,3.40e-07,9;CL:0002419,3.40e-07,9;CL:0000790,3.40e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.84e-08!23;UBERON:0000974!1.84e-08!23;UBERON:0004807!1.84e-08!23;UBERON:0005058!1.84e-08!23;UBERON:0003351!1.84e-08!23;UBERON:0009113!1.84e-08!23;UBERON:0003295!1.84e-08!23;UBERON:0009722!1.84e-08!23;UBERON:0005562!1.84e-08!23;UBERON:0007690!1.84e-08!23;UBERON:0006562!1.15e-07!24;UBERON:0003408!1.15e-07!24;UBERON:0001557!1.15e-07!24;UBERON:0001042!1.15e-07!24;UBERON:0008814!1.15e-07!24;UBERON:0009145!1.15e-07!24;UBERON:0004177!1.42e-07!29;UBERON:0000153!1.76e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.31e-19,23;UBERON:0000974,4.31e-19,23;UBERON:0004807,4.31e-19,23;UBERON:0005058,4.31e-19,23;UBERON:0003351,4.31e-19,23;UBERON:0009113,4.31e-19,23;UBERON:0003295,4.31e-19,23;UBERON:0009722,4.31e-19,23;UBERON:0005562,4.31e-19,23;UBERON:0007690,4.31e-19,23;UBERON:0006562,4.67e-18,24;UBERON:0003408,4.67e-18,24;UBERON:0001557,4.67e-18,24;UBERON:0001042,4.67e-18,24;UBERON:0008814,4.67e-18,24;UBERON:0009145,4.67e-18,24;UBERON:0000072,2.02e-15,27;UBERON:0004177,5.68e-14,29;UBERON:0005057,5.68e-14,29;UBERON:0007811,5.38e-13,36;UBERON:0000949,2.50e-12,72;UBERON:0000153,3.06e-12,43;UBERON:0000077,1.20e-10,35;UBERON:0002193,3.53e-09,48;UBERON:0002405,3.53e-09,48;UBERON:0002390,4.83e-09,45;UBERON:0003061,4.83e-09,45;UBERON:0000065,2.47e-08,41;UBERON:0001004,5.14e-08,42;UBERON:0002368,1.44e-07,60;UBERON:0001264,8.32e-07,12|phase1_expression=2.24208385946712,0,0,0,0,0,0,2.58246646883153,1.12630977721333,0,1.19852577757853,0.319088635981346,8.04643430676667,2.09808965805594,0.333109761815663,0,0,1.73504190947031,0.685572168028694,1.27316895539409,0.17008658030214,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,7.73015738027667,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.571301968807607,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.921639199537461,0,0.182975287204819,0,0,0.56276261003168,0.30559649555362,1.17851434189467,0.142371680799103,0.372798891650601,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0.693941307064543,0.304465478312141,0.922461989024234,1.05505848386836,0.705532242814229,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0,0.599075622529601,0,0.508280908292259,0.599162557619291,0.457500602818626,1.00523481690292,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,0.407357455401265,0,0,0.210441855886474,2.21204753036596,0.689706313300419,0.540186389416048,0.452114453507145,0.204109497453984,0.384341160854549,0.187403449119458,0,1.5089759505299,0.378212160335639,0.703804496655795,0.219195732427575,1.39023624612799,0,0.61734640922383,2.18937693500343,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.473489471170421,0.787056926989615,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.630869845692382,0.514523061896422,0,0,1.2797295032114,1.16118335930219,0.257734922644187,0.605050573870028,0,0,0,0.329397909448022,1.00534083520108,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,1.48523066392647,0,1.4255592949172,0.775809948670503,1.75339549725796,0.316182685621286,0.295220295959204,0.470996183524124,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.568474235311454,0.651859905768103,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.709700426041343,0.890328018336276,1.62886959353576,0.164970122972535,0,4.37005145078967,5.74414758233027,3.39489143560617,2.65771703592696,0.922305443831782,0.516856586336442,1.81766864738753,2.49548164869305,0.316036757935816,1.05418608574999,3.09406629744561,0.340439605753788,1.62054984628179,0.258717367565509,0.643011105094777,1.06404140185364,0.891844088010353,1.31639216481697,1.8267896946876,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0.82554747185289,0.185194527369712,0.565105371014073,0.410082683163076,0,3.0596117398894,2.6590775941495,0.552799895217695,0,1.42351197111511,0.609958401380546,0.972048067396211,0.209088296014469,0.218362563746178,0.539457385539283,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.777804753376191,1.29159823477731,0.844780627453891,1.17357238645754,0.2604087696879,0.838874755405687,0.241584120826006,0,7.58426689507628,1.62180172232131,3.59488350076895,7.14564526377873,8.05620130503666,7.15252877212554,12.1397404015169,9.30444021199837,12.9237055933629,15.39377494431,13.1074040677893,14.1313927072641,12.9885986214445,17.0640277185091,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,1.37016503954128,0,0,0,0,0.51776031175182,1.14166082342594,0.399024873401031,0.682934423016537,1.21553358534147,0.419226325255965,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0,0,0,0.280924522409647,0.512201219238954,0.229741875822453,0,0.347652977834566,0.38581844092741,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.423073039458382,0,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,1.07435527024149,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p4@Ccdc30}}
|EntrezGene=73332
|HGNC=
|MCL_coexpression_id=4
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000154606_5end
|description=CAGE_peak_4_at_Ccdc30_5end
|id=chr4:119032391..119032415,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,3.40e-07,9;CL:0000789,3.40e-07,9;CL:0002420,3.40e-07,9;CL:0002419,3.40e-07,9;CL:0000790,3.40e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!1.84e-08!23;UBERON:0000974!1.84e-08!23;UBERON:0004807!1.84e-08!23;UBERON:0005058!1.84e-08!23;UBERON:0003351!1.84e-08!23;UBERON:0009113!1.84e-08!23;UBERON:0003295!1.84e-08!23;UBERON:0009722!1.84e-08!23;UBERON:0005562!1.84e-08!23;UBERON:0007690!1.84e-08!23;UBERON:0006562!1.15e-07!24;UBERON:0003408!1.15e-07!24;UBERON:0001557!1.15e-07!24;UBERON:0001042!1.15e-07!24;UBERON:0008814!1.15e-07!24;UBERON:0009145!1.15e-07!24;UBERON:0004177!1.42e-07!29;UBERON:0000153!1.76e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.31e-19,23;UBERON:0000974,4.31e-19,23;UBERON:0004807,4.31e-19,23;UBERON:0005058,4.31e-19,23;UBERON:0003351,4.31e-19,23;UBERON:0009113,4.31e-19,23;UBERON:0003295,4.31e-19,23;UBERON:0009722,4.31e-19,23;UBERON:0005562,4.31e-19,23;UBERON:0007690,4.31e-19,23;UBERON:0006562,4.67e-18,24;UBERON:0003408,4.67e-18,24;UBERON:0001557,4.67e-18,24;UBERON:0001042,4.67e-18,24;UBERON:0008814,4.67e-18,24;UBERON:0009145,4.67e-18,24;UBERON:0000072,2.02e-15,27;UBERON:0004177,5.68e-14,29;UBERON:0005057,5.68e-14,29;UBERON:0007811,5.38e-13,36;UBERON:0000949,2.50e-12,72;UBERON:0000153,3.06e-12,43;UBERON:0000077,1.20e-10,35;UBERON:0002193,3.53e-09,48;UBERON:0002405,3.53e-09,48;UBERON:0002390,4.83e-09,45;UBERON:0003061,4.83e-09,45;UBERON:0000065,2.47e-08,41;UBERON:0001004,5.14e-08,42;UBERON:0002368,1.44e-07,60;UBERON:0001264,8.32e-07,12
|phase1_expression=2.24208385946712,0,0,0,0,0,0,2.58246646883153,1.12630977721333,0,1.19852577757853,0.319088635981346,8.04643430676667,2.09808965805594,0.333109761815663,0,0,1.73504190947031,0.685572168028694,1.27316895539409,0.17008658030214,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,7.73015738027667,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.571301968807607,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.921639199537461,0,0.182975287204819,0,0,0.56276261003168,0.30559649555362,1.17851434189467,0.142371680799103,0.372798891650601,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0.693941307064543,0.304465478312141,0.922461989024234,1.05505848386836,0.705532242814229,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0,0.599075622529601,0,0.508280908292259,0.599162557619291,0.457500602818626,1.00523481690292,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,0.407357455401265,0,0,0.210441855886474,2.21204753036596,0.689706313300419,0.540186389416048,0.452114453507145,0.204109497453984,0.384341160854549,0.187403449119458,0,1.5089759505299,0.378212160335639,0.703804496655795,0.219195732427575,1.39023624612799,0,0.61734640922383,2.18937693500343,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.473489471170421,0.787056926989615,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.630869845692382,0.514523061896422,0,0,1.2797295032114,1.16118335930219,0.257734922644187,0.605050573870028,0,0,0,0.329397909448022,1.00534083520108,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,1.48523066392647,0,1.4255592949172,0.775809948670503,1.75339549725796,0.316182685621286,0.295220295959204,0.470996183524124,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.568474235311454,0.651859905768103,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.709700426041343,0.890328018336276,1.62886959353576,0.164970122972535,0,4.37005145078967,5.74414758233027,3.39489143560617,2.65771703592696,0.922305443831782,0.516856586336442,1.81766864738753,2.49548164869305,0.316036757935816,1.05418608574999,3.09406629744561,0.340439605753788,1.62054984628179,0.258717367565509,0.643011105094777,1.06404140185364,0.891844088010353,1.31639216481697,1.8267896946876,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0.82554747185289,0.185194527369712,0.565105371014073,0.410082683163076,0,3.0596117398894,2.6590775941495,0.552799895217695,0,1.42351197111511,0.609958401380546,0.972048067396211,0.209088296014469,0.218362563746178,0.539457385539283,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.777804753376191,1.29159823477731,0.844780627453891,1.17357238645754,0.2604087696879,0.838874755405687,0.241584120826006,0,7.58426689507628,1.62180172232131,3.59488350076895,7.14564526377873,8.05620130503666,7.15252877212554,12.1397404015169,9.30444021199837,12.9237055933629,15.39377494431,13.1074040677893,14.1313927072641,12.9885986214445,17.0640277185091,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,1.37016503954128,0,0,0,0,0.51776031175182,1.14166082342594,0.399024873401031,0.682934423016537,1.21553358534147,0.419226325255965,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0,0,0,0.280924522409647,0.512201219238954,0.229741875822453,0,0.347652977834566,0.38581844092741,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.423073039458382,0,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,1.07435527024149,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p4@Ccdc30
}}

Revision as of 03:37, 14 September 2013

Short description:p4@Ccdc30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ccdc30_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 0bp_to_ENSMUST00000154606_5end
EntrezGene:Ccdc30
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Ccdc30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F812.14
thymus, neonate N03.CNhs11137.2104-43C79.30
thymus, neonate N06.CNhs11197.681-26C412.92
thymus, neonate N07.CNhs11211.713-19D315.39
thymus, neonate N10.CNhs11194.748-24E413.11
thymus, neonate N20.CNhs11186.820-7A214.13
thymus, neonate N25.CNhs11125.1362-25G712.99
thymus, neonate N30.CNhs11132.1393-42G217.06
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.40e-079
alpha-beta T cell3.40e-079
immature T cell3.40e-079
mature T cell3.40e-079
immature alpha-beta T cell3.40e-079

Uber anatomy
Ontology termp-valuen
thymus4.31e-1923
neck4.31e-1923
respiratory system epithelium4.31e-1923
hemolymphoid system gland4.31e-1923
pharyngeal epithelium4.31e-1923
thymic region4.31e-1923
pharyngeal gland4.31e-1923
entire pharyngeal arch endoderm4.31e-1923
thymus primordium4.31e-1923
early pharyngeal endoderm4.31e-1923
pharynx4.67e-1824
gland of gut4.67e-1824
upper respiratory tract4.67e-1824
chordate pharynx4.67e-1824
pharyngeal arch system4.67e-1824
pharyngeal region of foregut4.67e-1824
segment of respiratory tract2.02e-1527
hemopoietic organ5.68e-1429
immune organ5.68e-1429
craniocervical region5.38e-1336
endocrine system2.50e-1272
anterior region of body3.06e-1243
mixed endoderm/mesoderm-derived structure1.20e-1035
hemolymphoid system3.53e-0948
immune system3.53e-0948
hematopoietic system4.83e-0945
blood island4.83e-0945
respiratory tract2.47e-0841
respiratory system5.14e-0842
endocrine gland1.44e-0760
pancreas8.32e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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