FFCP PHASE1:Mm9::chr4:106295029..106295082,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230576|HGNC=|MCL_coexpression_id=24|UniProt=Q8C159,A2AVQ6|association_with_transcript=0bp_to_ENSMUST00000047922,NM_177667,uc008tyn.1_5end|description=CAGE_peak_1_at_Ttc22_5end|id=chr4:106295029..106295082,+|ontology_enrichment_celltype=CL:0002563!2.90e-07!9;CL:0002251!2.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,8.93e-09,9;CL:0002251,8.93e-09,9;CL:0000239,1.61e-07,6;CL:0000677,1.61e-07,6;CL:0000584,1.61e-07,6;CL:0002076,5.96e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.69e-16!59;UBERON:0000160!1.43e-15!43;UBERON:0000344!6.23e-12!15;UBERON:0001242!1.67e-10!13;UBERON:0000060!1.67e-10!13;UBERON:0001262!1.67e-10!13;UBERON:0004786!1.67e-10!13;UBERON:0001007!1.27e-09!128;UBERON:0001555!1.27e-09!128;UBERON:0007026!1.27e-09!128;UBERON:0004119!1.52e-09!130;UBERON:0000925!1.52e-09!130;UBERON:0006595!1.52e-09!130;UBERON:0004921!1.02e-08!126;UBERON:0004185!1.02e-08!126;UBERON:0004923!2.25e-07!24;UBERON:0003350!2.90e-07!9;UBERON:0004808!2.90e-07!9;UBERON:0001277!2.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.83e-24,31;UBERON:0005409,4.45e-23,47;UBERON:0000344,1.14e-14,15;UBERON:0001242,7.24e-13,13;UBERON:0001262,7.24e-13,13;UBERON:0004786,7.24e-13,13;UBERON:0003350,8.93e-09,9;UBERON:0004808,8.93e-09,9;UBERON:0001277,8.93e-09,9;UBERON:0004923,2.37e-08,24;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004119,5.60e-07,118;UBERON:0000925,5.60e-07,118;UBERON:0006595,5.60e-07,118|phase1_expression=0,65.6073766361999,85.9948562446223,105.862473957391,96.672875879645,19.4739955417792,23.3612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,25.2788028013583,22.7115188256498,62.0170521244222,38.7685796543167,37.7074657200306,67.0782670681,40.3248207615889,27.7163138319131,0,0,0,1.73310971850765,2.65975432573588,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,5.59501010623394,0,0,0,0,0,0,0,0.125666591329675,18.539622580078,0,0,0,0,0,26.0948465705371,0,0,27.3339049073193,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.90422890701429,0.204109497453984,0,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,1.09597866213787,6.95118123063995,8.70630416305416,8.84863186554157,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,66.7445941627272,29.8829140329805,0,0,1.54640953586512,6.25218926332362,8.89512175379481,11.6037631928661,26.0990983849481,27.6694243936338,19.3528110776208,22.8799942847323,20.8611573217459,34.1551375288604,21.6138049874694,19.3167035056736,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,1.03327103585722,0.941992367048249,1.1105744752962,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.670025029767263,0.714130922658041,1.36593553500459,0.315270288212382,0.664394068946325,0.318909537314974,0.983179888294428,0.518054945597687,1.01254341007058,0,0,2.45882136509518,2.75936746304733,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,5.16856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,6.46835250932197,0,0,0,0.709360934569094,0.178368817602071,0,1.2178597964584,0,0.63549621259146,0.661585194164886,6.76033637060068,11.1410454420175,4.58378229453985,6.32673423216623,8.86360858623331,27.399198643206,0,0,0.412773735926445,0,0,0,0,0,0,0,21.0027535963325,0,0.203319467126849,3.99619761040665,7.10900206449194,10.2630404960703,7.8221320903196,6.4469695465762,12.8260411572175,23.5899251391063,3.72803587852155,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.233753804363138,13.1503622496823,0,0,0,2.12508553435409,4.129014459926,1.09890974560359,13.7195762610602,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.419226325255965,1.83843508450014,1.33348036680969,1.64828045791115,1.92551525755089,1.01078884705519,1.01391719956096,2.07488975524684,1.31098110457835,1.28050304809739,1.89537047553524,2.38146845641537,1.62238056322798,1.54327376370964,3.29668720642645,1.76638704161277,3.08582327146874,1.24233064311536,1.43061713968393,1.88950341622027,1.12931256498397,1.77690676572521,1.46342378298218,1.05227884575137,1.22223702461276,3.36685362994643,1.54225523561426,2.06859412988683,1.63692417267876,1.85924209423159,5.78719832943424,3.74715866906919,3.50897412668113,3.65280791882107,1.53030665655075,1.10295709559758,0|short_description=p1@Ttc22}} | ||
|EntrezGene=230576 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q8C159,A2AVQ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000047922,NM_177667,uc008tyn.1_5end | |||
|description=CAGE_peak_1_at_Ttc22_5end | |||
|id=chr4:106295029..106295082,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.90e-07!9;CL:0002251!2.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.93e-09,9;CL:0002251,8.93e-09,9;CL:0000239,1.61e-07,6;CL:0000677,1.61e-07,6;CL:0000584,1.61e-07,6;CL:0002076,5.96e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.69e-16!59;UBERON:0000160!1.43e-15!43;UBERON:0000344!6.23e-12!15;UBERON:0001242!1.67e-10!13;UBERON:0000060!1.67e-10!13;UBERON:0001262!1.67e-10!13;UBERON:0004786!1.67e-10!13;UBERON:0001007!1.27e-09!128;UBERON:0001555!1.27e-09!128;UBERON:0007026!1.27e-09!128;UBERON:0004119!1.52e-09!130;UBERON:0000925!1.52e-09!130;UBERON:0006595!1.52e-09!130;UBERON:0004921!1.02e-08!126;UBERON:0004185!1.02e-08!126;UBERON:0004923!2.25e-07!24;UBERON:0003350!2.90e-07!9;UBERON:0004808!2.90e-07!9;UBERON:0001277!2.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.83e-24,31;UBERON:0005409,4.45e-23,47;UBERON:0000344,1.14e-14,15;UBERON:0001242,7.24e-13,13;UBERON:0001262,7.24e-13,13;UBERON:0004786,7.24e-13,13;UBERON:0003350,8.93e-09,9;UBERON:0004808,8.93e-09,9;UBERON:0001277,8.93e-09,9;UBERON:0004923,2.37e-08,24;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004119,5.60e-07,118;UBERON:0000925,5.60e-07,118;UBERON:0006595,5.60e-07,118 | |||
|phase1_expression=0,65.6073766361999,85.9948562446223,105.862473957391,96.672875879645,19.4739955417792,23.3612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,25.2788028013583,22.7115188256498,62.0170521244222,38.7685796543167,37.7074657200306,67.0782670681,40.3248207615889,27.7163138319131,0,0,0,1.73310971850765,2.65975432573588,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,5.59501010623394,0,0,0,0,0,0,0,0.125666591329675,18.539622580078,0,0,0,0,0,26.0948465705371,0,0,27.3339049073193,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.90422890701429,0.204109497453984,0,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,1.09597866213787,6.95118123063995,8.70630416305416,8.84863186554157,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,66.7445941627272,29.8829140329805,0,0,1.54640953586512,6.25218926332362,8.89512175379481,11.6037631928661,26.0990983849481,27.6694243936338,19.3528110776208,22.8799942847323,20.8611573217459,34.1551375288604,21.6138049874694,19.3167035056736,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,1.03327103585722,0.941992367048249,1.1105744752962,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.670025029767263,0.714130922658041,1.36593553500459,0.315270288212382,0.664394068946325,0.318909537314974,0.983179888294428,0.518054945597687,1.01254341007058,0,0,2.45882136509518,2.75936746304733,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,5.16856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,6.46835250932197,0,0,0,0.709360934569094,0.178368817602071,0,1.2178597964584,0,0.63549621259146,0.661585194164886,6.76033637060068,11.1410454420175,4.58378229453985,6.32673423216623,8.86360858623331,27.399198643206,0,0,0.412773735926445,0,0,0,0,0,0,0,21.0027535963325,0,0.203319467126849,3.99619761040665,7.10900206449194,10.2630404960703,7.8221320903196,6.4469695465762,12.8260411572175,23.5899251391063,3.72803587852155,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.233753804363138,13.1503622496823,0,0,0,2.12508553435409,4.129014459926,1.09890974560359,13.7195762610602,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.419226325255965,1.83843508450014,1.33348036680969,1.64828045791115,1.92551525755089,1.01078884705519,1.01391719956096,2.07488975524684,1.31098110457835,1.28050304809739,1.89537047553524,2.38146845641537,1.62238056322798,1.54327376370964,3.29668720642645,1.76638704161277,3.08582327146874,1.24233064311536,1.43061713968393,1.88950341622027,1.12931256498397,1.77690676572521,1.46342378298218,1.05227884575137,1.22223702461276,3.36685362994643,1.54225523561426,2.06859412988683,1.63692417267876,1.85924209423159,5.78719832943424,3.74715866906919,3.50897412668113,3.65280791882107,1.53030665655075,1.10295709559758,0 | |||
|short_description=p1@Ttc22 | |||
}} |
Revision as of 03:20, 14 September 2013
Short description: | p1@Ttc22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ttc22_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000047922, NM_177667, uc008tyn.1_5end |
EntrezGene: | Ttc22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.93e-09 | 9 |
epithelial cell of alimentary canal | 8.93e-09 | 9 |
brush border epithelial cell | 1.61e-07 | 6 |
gut absorptive cell | 1.61e-07 | 6 |
enterocyte | 1.61e-07 | 6 |
endo-epithelial cell | 5.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.83e-24 | 31 |
gastrointestinal system | 4.45e-23 | 47 |
mucosa | 1.14e-14 | 15 |
intestinal mucosa | 7.24e-13 | 13 |
wall of intestine | 7.24e-13 | 13 |
gastrointestinal system mucosa | 7.24e-13 | 13 |
epithelium of mucosa | 8.93e-09 | 9 |
gastrointestinal system epithelium | 8.93e-09 | 9 |
intestinal epithelium | 8.93e-09 | 9 |
organ component layer | 2.37e-08 | 24 |
digestive system | 2.46e-07 | 116 |
digestive tract | 2.46e-07 | 116 |
primitive gut | 2.46e-07 | 116 |
endoderm-derived structure | 5.60e-07 | 118 |
endoderm | 5.60e-07 | 118 |
presumptive endoderm | 5.60e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.