FFCP PHASE1:Mm9::chr3:95231497..95231510,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100043305|HGNC=|MCL_coexpression_id=878|UniProt=|association_with_transcript=-82bp_to_ENSMUST00000163228,uc008qjq.1_5end|description=CAGE_peak_1_at_Gm4349_5end|id=chr3:95231497..95231510,+|ontology_enrichment_celltype=CL:0000063!3.56e-24!66;CL:0000144!1.21e-15!121;CL:0000012!1.21e-15!121;CL:0002371!5.85e-14!118;CL:0000988!8.13e-13!32;CL:0002032!8.13e-13!32;CL:0000037!8.13e-13!32;CL:0000566!8.13e-13!32;CL:0000837!8.13e-13!32;CL:0000066!1.49e-12!25;CL:0000548!2.63e-12!115;CL:0000004!2.63e-12!115;CL:0000255!2.63e-12!115;CL:0002031!6.07e-12!25;CL:0002076!1.28e-11!15;CL:0002320!7.71e-11!46;CL:0000134!7.71e-11!46;CL:0000219!1.01e-09!54;CL:0000223!3.28e-09!20;CL:0000838!8.64e-09!12;CL:0002563!1.61e-08!9;CL:0002251!1.61e-08!9;CL:0000791!4.17e-08!9;CL:0000789!4.17e-08!9;CL:0002420!4.17e-08!9;CL:0002419!4.17e-08!9;CL:0000790!4.17e-08!9;CL:0000084!5.48e-08!11;CL:0000827!5.48e-08!11;CL:0000034!5.68e-08!97;CL:0000738!6.11e-08!17;CL:0002087!6.11e-08!17;CL:0000542!7.00e-08!13;CL:0000051!7.00e-08!13;CL:0000624!2.95e-07!8;CL:0000075!5.30e-07!7|ontology_enrichment_celltype_v019_2=CL:0000988,2.37e-24,32;CL:0002032,2.37e-24,32;CL:0000037,2.37e-24,32;CL:0000837,2.37e-24,32;CL:0002031,7.45e-24,25;CL:0002320,3.13e-21,46;CL:0000134,3.13e-21,46;CL:0000219,8.29e-19,54;CL:0000838,3.94e-16,12;CL:0000738,2.03e-15,17;CL:0002087,2.03e-15,17;CL:0000542,9.96e-15,13;CL:0000051,9.96e-15,13;CL:0000084,1.33e-14,11;CL:0000827,1.33e-14,11;CL:0000791,1.93e-14,9;CL:0000789,1.93e-14,9;CL:0002420,1.93e-14,9;CL:0002419,1.93e-14,9;CL:0000790,1.93e-14,9;CL:0000624,7.84e-13,8;CL:0000034,4.11e-12,97;CL:0000049,3.70e-11,19;CL:0000723,9.54e-10,91;CL:0000048,9.54e-10,91;CL:0000553,1.46e-09,6;CL:0000556,1.46e-09,6;CL:0000839,1.87e-09,13;CL:0000763,2.36e-09,16;CL:0000893,2.92e-09,6;CL:0002489,2.92e-09,6;CL:0000898,2.92e-09,6;CL:0000809,2.92e-09,6;CL:0000810,2.92e-09,6;CL:0000895,2.92e-09,6;CL:0000808,2.92e-09,6;CL:0000894,2.92e-09,6;CL:0000806,2.92e-09,6;CL:0000807,2.92e-09,6;CL:0000805,2.92e-09,6;CL:0002425,2.92e-09,6;CL:0002436,2.92e-09,6;CL:0002427,2.92e-09,6;CL:0002428,2.92e-09,6;CL:0002429,2.92e-09,6;CL:0002433,2.92e-09,6;CL:0002431,2.92e-09,6;CL:0002432,2.92e-09,6;CL:0000050,1.74e-08,9;CL:0000349,4.51e-08,3;CL:0000351,4.51e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.65e-11!15;UBERON:0002384!7.71e-11!46;UBERON:0001242!7.52e-10!13;UBERON:0000060!7.52e-10!13;UBERON:0001262!7.52e-10!13;UBERON:0004786!7.52e-10!13;UBERON:0000485!8.48e-10!11;UBERON:0003350!1.61e-08!9;UBERON:0004808!1.61e-08!9;UBERON:0001277!1.61e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.13e-21,46;UBERON:0002193,2.68e-08,48;UBERON:0002405,2.68e-08,48;UBERON:0000358,4.51e-08,3;UBERON:0000307,4.51e-08,3;UBERON:0007010,4.51e-08,3;UBERON:0002390,8.57e-08,45;UBERON:0003061,8.57e-08,45;UBERON:0002371,1.74e-07,16|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,1.20985684522732,2.50447864973174,0.503637815735669,3.03696432774183,1.42035655785734,1.12630977721333,0,3.93801326918661,2.39316476986009,3.76641605848653,2.79745287740792,0,4.25198061518635,2.09868563438444,2.05050407482854,1.91960207048034,3.81950686618227,0,0,1.82839852397255,0.47997726838022,3.44113921600755,1.14846392823004,0.430761996159075,0.861884930743556,1.90023419456374,1.00812051903972,0.886922042621219,1.27006134691926,0,0,1.44425809875637,0.997407872150954,0.204169356262369,0.418531630736908,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.17447824240415,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,1.13357340160178,3.47837386442013,4.30211938490693,0,0,0,0,0,0,0.779358013808606,1.41335829804136,0.422530259330042,3.84979432242953,0,7.11066703153331,0.649473123033642,0.760079596425296,0.505524445014783,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,4.66170502085536,2.9605572681127,4.02923079273788,0,0,0,0,0,0,0,0,1.54667864109319,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p1@Gm4349}} | ||
|EntrezGene=100043305 | |||
|HGNC= | |||
|MCL_coexpression_id=878 | |||
|UniProt= | |||
|association_with_transcript=-82bp_to_ENSMUST00000163228,uc008qjq.1_5end | |||
|description=CAGE_peak_1_at_Gm4349_5end | |||
|id=chr3:95231497..95231510,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.56e-24!66;CL:0000144!1.21e-15!121;CL:0000012!1.21e-15!121;CL:0002371!5.85e-14!118;CL:0000988!8.13e-13!32;CL:0002032!8.13e-13!32;CL:0000037!8.13e-13!32;CL:0000566!8.13e-13!32;CL:0000837!8.13e-13!32;CL:0000066!1.49e-12!25;CL:0000548!2.63e-12!115;CL:0000004!2.63e-12!115;CL:0000255!2.63e-12!115;CL:0002031!6.07e-12!25;CL:0002076!1.28e-11!15;CL:0002320!7.71e-11!46;CL:0000134!7.71e-11!46;CL:0000219!1.01e-09!54;CL:0000223!3.28e-09!20;CL:0000838!8.64e-09!12;CL:0002563!1.61e-08!9;CL:0002251!1.61e-08!9;CL:0000791!4.17e-08!9;CL:0000789!4.17e-08!9;CL:0002420!4.17e-08!9;CL:0002419!4.17e-08!9;CL:0000790!4.17e-08!9;CL:0000084!5.48e-08!11;CL:0000827!5.48e-08!11;CL:0000034!5.68e-08!97;CL:0000738!6.11e-08!17;CL:0002087!6.11e-08!17;CL:0000542!7.00e-08!13;CL:0000051!7.00e-08!13;CL:0000624!2.95e-07!8;CL:0000075!5.30e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.37e-24,32;CL:0002032,2.37e-24,32;CL:0000037,2.37e-24,32;CL:0000837,2.37e-24,32;CL:0002031,7.45e-24,25;CL:0002320,3.13e-21,46;CL:0000134,3.13e-21,46;CL:0000219,8.29e-19,54;CL:0000838,3.94e-16,12;CL:0000738,2.03e-15,17;CL:0002087,2.03e-15,17;CL:0000542,9.96e-15,13;CL:0000051,9.96e-15,13;CL:0000084,1.33e-14,11;CL:0000827,1.33e-14,11;CL:0000791,1.93e-14,9;CL:0000789,1.93e-14,9;CL:0002420,1.93e-14,9;CL:0002419,1.93e-14,9;CL:0000790,1.93e-14,9;CL:0000624,7.84e-13,8;CL:0000034,4.11e-12,97;CL:0000049,3.70e-11,19;CL:0000723,9.54e-10,91;CL:0000048,9.54e-10,91;CL:0000553,1.46e-09,6;CL:0000556,1.46e-09,6;CL:0000839,1.87e-09,13;CL:0000763,2.36e-09,16;CL:0000893,2.92e-09,6;CL:0002489,2.92e-09,6;CL:0000898,2.92e-09,6;CL:0000809,2.92e-09,6;CL:0000810,2.92e-09,6;CL:0000895,2.92e-09,6;CL:0000808,2.92e-09,6;CL:0000894,2.92e-09,6;CL:0000806,2.92e-09,6;CL:0000807,2.92e-09,6;CL:0000805,2.92e-09,6;CL:0002425,2.92e-09,6;CL:0002436,2.92e-09,6;CL:0002427,2.92e-09,6;CL:0002428,2.92e-09,6;CL:0002429,2.92e-09,6;CL:0002433,2.92e-09,6;CL:0002431,2.92e-09,6;CL:0002432,2.92e-09,6;CL:0000050,1.74e-08,9;CL:0000349,4.51e-08,3;CL:0000351,4.51e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.65e-11!15;UBERON:0002384!7.71e-11!46;UBERON:0001242!7.52e-10!13;UBERON:0000060!7.52e-10!13;UBERON:0001262!7.52e-10!13;UBERON:0004786!7.52e-10!13;UBERON:0000485!8.48e-10!11;UBERON:0003350!1.61e-08!9;UBERON:0004808!1.61e-08!9;UBERON:0001277!1.61e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.13e-21,46;UBERON:0002193,2.68e-08,48;UBERON:0002405,2.68e-08,48;UBERON:0000358,4.51e-08,3;UBERON:0000307,4.51e-08,3;UBERON:0007010,4.51e-08,3;UBERON:0002390,8.57e-08,45;UBERON:0003061,8.57e-08,45;UBERON:0002371,1.74e-07,16 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,1.20985684522732,2.50447864973174,0.503637815735669,3.03696432774183,1.42035655785734,1.12630977721333,0,3.93801326918661,2.39316476986009,3.76641605848653,2.79745287740792,0,4.25198061518635,2.09868563438444,2.05050407482854,1.91960207048034,3.81950686618227,0,0,1.82839852397255,0.47997726838022,3.44113921600755,1.14846392823004,0.430761996159075,0.861884930743556,1.90023419456374,1.00812051903972,0.886922042621219,1.27006134691926,0,0,1.44425809875637,0.997407872150954,0.204169356262369,0.418531630736908,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.17447824240415,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,1.13357340160178,3.47837386442013,4.30211938490693,0,0,0,0,0,0,0.779358013808606,1.41335829804136,0.422530259330042,3.84979432242953,0,7.11066703153331,0.649473123033642,0.760079596425296,0.505524445014783,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,4.66170502085536,2.9605572681127,4.02923079273788,0,0,0,0,0,0,0,0,1.54667864109319,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm4349 | |||
}} |
Revision as of 03:04, 14 September 2013
Short description: | p1@Gm4349 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm4349_5end |
Coexpression cluster: | MCL_coexpression_mm9:878 |
Association with transcript: | -82bp_to_ENSMUST00000163228, uc008qjq.1_5end |
EntrezGene: | Gm4349 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.13e-21 | 46 |
hemolymphoid system | 2.68e-08 | 48 |
immune system | 2.68e-08 | 48 |
blastocyst | 4.51e-08 | 3 |
blastula | 4.51e-08 | 3 |
cleaving embryo | 4.51e-08 | 3 |
hematopoietic system | 8.57e-08 | 45 |
blood island | 8.57e-08 | 45 |
bone marrow | 1.74e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.