FFCP PHASE1:Mm9::chr3:88138404..88138417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71913|HGNC=|MCL_coexpression_id=12|UniProt=Q9D709|association_with_transcript=8bp_to_ENSMUST00000001456_5end|description=CAGE_peak_2_at_Tmem79_5end|id=chr3:88138404..88138417,-|ontology_enrichment_celltype=CL:0002563!1.58e-07!9;CL:0002251!1.58e-07!9|ontology_enrichment_celltype_v019_2=CL:0002076,1.50e-11,15;CL:0002563,2.84e-11,9;CL:0002251,2.84e-11,9;CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000066,3.39e-10,25;CL:0000075,6.32e-09,7;CL:0000223,5.27e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.79e-15!59;UBERON:0000160!1.15e-13!43;UBERON:0000344!1.38e-12!15;UBERON:0001242!5.53e-11!13;UBERON:0000060!5.53e-11!13;UBERON:0001262!5.53e-11!13;UBERON:0004786!5.53e-11!13;UBERON:0004119!3.42e-10!130;UBERON:0000925!3.42e-10!130;UBERON:0006595!3.42e-10!130;UBERON:0001007!2.28e-09!128;UBERON:0001555!2.28e-09!128;UBERON:0007026!2.28e-09!128;UBERON:0004923!1.24e-08!24;UBERON:0004921!2.03e-08!126;UBERON:0004185!2.03e-08!126;UBERON:0000485!9.21e-08!11;UBERON:0003350!1.58e-07!9;UBERON:0004808!1.58e-07!9;UBERON:0001277!1.58e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.32e-31,47;UBERON:0000160,9.32e-30,31;UBERON:0000344,2.68e-21,15;UBERON:0001242,4.33e-18,13;UBERON:0001262,4.33e-18,13;UBERON:0004786,4.33e-18,13;UBERON:0004923,2.51e-17,24;UBERON:0004119,5.44e-17,118;UBERON:0000925,5.44e-17,118;UBERON:0006595,5.44e-17,118;UBERON:0001007,2.11e-15,116;UBERON:0001555,2.11e-15,116;UBERON:0007026,2.11e-15,116;UBERON:0004921,1.41e-13,114;UBERON:0003350,2.84e-11,9;UBERON:0004808,2.84e-11,9;UBERON:0001277,2.84e-11,9;UBERON:0000485,6.44e-09,11;UBERON:0002108,3.48e-08,4;UBERON:0000331,9.16e-07,3;UBERON:0002116,9.16e-07,3;UBERON:0001204,9.16e-07,3;UBERON:0001168,9.16e-07,3|phase1_expression=0.160148847104794,4.88565570695105,5.91499011206397,4.23449895829562,2.00358291978539,3.86122325397347,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.51983330145495,5.27641346454491,4.01962374880514,2.15380998079537,3.44753972297422,5.51067916423484,6.30075324399827,5.54326276638262,0,0,0,0.866554859253824,1.66234645358492,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.302286240427142,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.25602267690966,0,0,0,0,0,0,0,0.879666139307728,1.48316980640624,3.47038456607788,0,0.161766849947409,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,7.59963200862735,2.90895623329899,0,0,0.77320476793256,1.21010114774006,0.889512175379481,0.951128130562796,3.79623249235609,2.47048432086016,2.26201687920243,1.79060824837036,2.14460495831032,3.59527763461689,3.6743468478698,2.78797782556114,0.189667900953082,0,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0.704070744865506,0.670025029767263,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.690739927463582,0.723245292907558,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0,0,0.377210159511796,0.295301892880773,0,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.11204537257339,1.27099242518292,0.220528398054962,0.8244312647074,1.61464426695906,1.32688434841943,2.74556391207214,2.79039529566604,3.20628920292836,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.406638934253697,1.62008011232702,1.25452977608681,1.31017538247707,1.21377911746339,1.32245529160537,1.30877970992015,2.72191443912765,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,1.36038230169127,1.10992976687032,0.0897138566094757,0.503653849092235,1.35232715822533,0.750729901804728,0.915758121336325,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0,0.347652977834566,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0.436039249896986,0.0941093804153306,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.492522411877817,0,0.154936841185966,0.771626443924566,0.999242311751784,0,0.214871054048298,0.57386499620653,1.10295709559758,0.231867835620421|short_description=p2@Tmem79}} | ||
|EntrezGene=71913 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9D709 | |||
|association_with_transcript=8bp_to_ENSMUST00000001456_5end | |||
|description=CAGE_peak_2_at_Tmem79_5end | |||
|id=chr3:88138404..88138417,- | |||
|ontology_enrichment_celltype=CL:0002563!1.58e-07!9;CL:0002251!1.58e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.50e-11,15;CL:0002563,2.84e-11,9;CL:0002251,2.84e-11,9;CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000066,3.39e-10,25;CL:0000075,6.32e-09,7;CL:0000223,5.27e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.79e-15!59;UBERON:0000160!1.15e-13!43;UBERON:0000344!1.38e-12!15;UBERON:0001242!5.53e-11!13;UBERON:0000060!5.53e-11!13;UBERON:0001262!5.53e-11!13;UBERON:0004786!5.53e-11!13;UBERON:0004119!3.42e-10!130;UBERON:0000925!3.42e-10!130;UBERON:0006595!3.42e-10!130;UBERON:0001007!2.28e-09!128;UBERON:0001555!2.28e-09!128;UBERON:0007026!2.28e-09!128;UBERON:0004923!1.24e-08!24;UBERON:0004921!2.03e-08!126;UBERON:0004185!2.03e-08!126;UBERON:0000485!9.21e-08!11;UBERON:0003350!1.58e-07!9;UBERON:0004808!1.58e-07!9;UBERON:0001277!1.58e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.32e-31,47;UBERON:0000160,9.32e-30,31;UBERON:0000344,2.68e-21,15;UBERON:0001242,4.33e-18,13;UBERON:0001262,4.33e-18,13;UBERON:0004786,4.33e-18,13;UBERON:0004923,2.51e-17,24;UBERON:0004119,5.44e-17,118;UBERON:0000925,5.44e-17,118;UBERON:0006595,5.44e-17,118;UBERON:0001007,2.11e-15,116;UBERON:0001555,2.11e-15,116;UBERON:0007026,2.11e-15,116;UBERON:0004921,1.41e-13,114;UBERON:0003350,2.84e-11,9;UBERON:0004808,2.84e-11,9;UBERON:0001277,2.84e-11,9;UBERON:0000485,6.44e-09,11;UBERON:0002108,3.48e-08,4;UBERON:0000331,9.16e-07,3;UBERON:0002116,9.16e-07,3;UBERON:0001204,9.16e-07,3;UBERON:0001168,9.16e-07,3 | |||
|phase1_expression=0.160148847104794,4.88565570695105,5.91499011206397,4.23449895829562,2.00358291978539,3.86122325397347,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.51983330145495,5.27641346454491,4.01962374880514,2.15380998079537,3.44753972297422,5.51067916423484,6.30075324399827,5.54326276638262,0,0,0,0.866554859253824,1.66234645358492,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.302286240427142,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.25602267690966,0,0,0,0,0,0,0,0.879666139307728,1.48316980640624,3.47038456607788,0,0.161766849947409,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,7.59963200862735,2.90895623329899,0,0,0.77320476793256,1.21010114774006,0.889512175379481,0.951128130562796,3.79623249235609,2.47048432086016,2.26201687920243,1.79060824837036,2.14460495831032,3.59527763461689,3.6743468478698,2.78797782556114,0.189667900953082,0,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0.704070744865506,0.670025029767263,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.690739927463582,0.723245292907558,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0,0,0.377210159511796,0.295301892880773,0,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.11204537257339,1.27099242518292,0.220528398054962,0.8244312647074,1.61464426695906,1.32688434841943,2.74556391207214,2.79039529566604,3.20628920292836,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.406638934253697,1.62008011232702,1.25452977608681,1.31017538247707,1.21377911746339,1.32245529160537,1.30877970992015,2.72191443912765,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,1.36038230169127,1.10992976687032,0.0897138566094757,0.503653849092235,1.35232715822533,0.750729901804728,0.915758121336325,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0,0.347652977834566,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0.436039249896986,0.0941093804153306,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.492522411877817,0,0.154936841185966,0.771626443924566,0.999242311751784,0,0.214871054048298,0.57386499620653,1.10295709559758,0.231867835620421 | |||
|short_description=p2@Tmem79 | |||
}} |
Revision as of 02:46, 14 September 2013
Short description: | p2@Tmem79 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem79_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 8bp_to_ENSMUST00000001456_5end |
EntrezGene: | Tmem79 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.50e-11 | 15 |
intestinal epithelial cell | 2.84e-11 | 9 |
epithelial cell of alimentary canal | 2.84e-11 | 9 |
brush border epithelial cell | 1.39e-10 | 6 |
gut absorptive cell | 1.39e-10 | 6 |
enterocyte | 1.39e-10 | 6 |
epithelial cell | 3.39e-10 | 25 |
columnar/cuboidal epithelial cell | 6.32e-09 | 7 |
endodermal cell | 5.27e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.32e-31 | 47 |
intestine | 9.32e-30 | 31 |
mucosa | 2.68e-21 | 15 |
intestinal mucosa | 4.33e-18 | 13 |
wall of intestine | 4.33e-18 | 13 |
gastrointestinal system mucosa | 4.33e-18 | 13 |
organ component layer | 2.51e-17 | 24 |
endoderm-derived structure | 5.44e-17 | 118 |
endoderm | 5.44e-17 | 118 |
presumptive endoderm | 5.44e-17 | 118 |
digestive system | 2.11e-15 | 116 |
digestive tract | 2.11e-15 | 116 |
primitive gut | 2.11e-15 | 116 |
subdivision of digestive tract | 1.41e-13 | 114 |
epithelium of mucosa | 2.84e-11 | 9 |
gastrointestinal system epithelium | 2.84e-11 | 9 |
intestinal epithelium | 2.84e-11 | 9 |
simple columnar epithelium | 6.44e-09 | 11 |
small intestine | 3.48e-08 | 4 |
ileal mucosa | 9.16e-07 | 3 |
ileum | 9.16e-07 | 3 |
mucosa of small intestine | 9.16e-07 | 3 |
wall of small intestine | 9.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.