FFCP PHASE1:Mm9::chr3:88031356..88031360,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=580|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:88031356..88031360,+|id=chr3:88031356..88031360,+|ontology_enrichment_celltype=CL:0000117!8.90e-18!23;CL:0000337!8.90e-18!23;CL:0002319!2.97e-14!43;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0000055!3.34e-11!50;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000393!1.89e-07!39;CL:0000211!1.89e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-24,23;CL:0000337,9.71e-24,23;CL:0002319,2.97e-18,43;CL:0000221,1.22e-17,44;CL:0000133,1.22e-17,44;CL:0000540,1.86e-14,33;CL:0000047,1.86e-14,33;CL:0000031,1.86e-14,33;CL:0000404,1.86e-14,33;CL:0000393,3.15e-11,39;CL:0000211,3.15e-11,39;CL:0002609,7.30e-09,6;CL:0002321,4.78e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.84e-35!52;UBERON:0005068!4.84e-35!52;UBERON:0006241!4.84e-35!52;UBERON:0007135!4.84e-35!52;UBERON:0000073!2.76e-34!75;UBERON:0001016!2.76e-34!75;UBERON:0001017!7.43e-34!73;UBERON:0005743!7.43e-34!73;UBERON:0000955!4.82e-32!50;UBERON:0006238!4.82e-32!50;UBERON:0002616!3.41e-31!49;UBERON:0000033!6.25e-29!63;UBERON:0002020!2.02e-27!34;UBERON:0002346!3.93e-27!71;UBERON:0003075!3.93e-27!71;UBERON:0007284!3.93e-27!71;UBERON:0003056!1.23e-24!49;UBERON:0004121!1.25e-24!102;UBERON:0000924!1.25e-24!102;UBERON:0006601!1.25e-24!102;UBERON:0003080!2.26e-24!40;UBERON:0002780!2.06e-23!39;UBERON:0001890!2.06e-23!39;UBERON:0006240!2.06e-23!39;UBERON:0002791!5.25e-23!29;UBERON:0003528!5.25e-23!29;UBERON:0001893!5.25e-23!29;UBERON:0007811!5.85e-17!86;UBERON:0000956!6.98e-17!21;UBERON:0001869!6.98e-17!21;UBERON:0000203!6.98e-17!21;UBERON:0000153!7.52e-14!94;UBERON:0002619!4.06e-13!17;UBERON:0003076!6.83e-11!12;UBERON:0003057!6.83e-11!12;UBERON:0000025!3.43e-08!114;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0002420!3.05e-07!8;UBERON:0007245!3.05e-07!8;UBERON:0010009!3.05e-07!8;UBERON:0010011!3.05e-07!8;UBERON:0000454!3.05e-07!8;UBERON:0004111!5.74e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.03e-42,73;UBERON:0001049,3.73e-41,52;UBERON:0005068,3.73e-41,52;UBERON:0006241,3.73e-41,52;UBERON:0007135,3.73e-41,52;UBERON:0000073,8.21e-41,54;UBERON:0001016,1.73e-40,75;UBERON:0002020,7.75e-40,34;UBERON:0000955,1.46e-34,47;UBERON:0006238,1.46e-34,47;UBERON:0002616,2.19e-33,46;UBERON:0003528,2.76e-33,29;UBERON:0002791,2.76e-33,29;UBERON:0001893,2.76e-33,29;UBERON:0002346,6.86e-31,64;UBERON:0003075,6.86e-31,64;UBERON:0007284,6.86e-31,64;UBERON:0004121,1.09e-28,95;UBERON:0000924,1.09e-28,95;UBERON:0006601,1.09e-28,95;UBERON:0003080,8.16e-28,40;UBERON:0002780,1.74e-26,39;UBERON:0001890,1.74e-26,39;UBERON:0006240,1.74e-26,39;UBERON:0010371,1.98e-25,73;UBERON:0000956,3.30e-24,21;UBERON:0001869,3.30e-24,21;UBERON:0000203,3.30e-24,21;UBERON:0003056,7.87e-21,49;UBERON:0002619,1.24e-18,17;UBERON:0010314,1.80e-17,92;UBERON:0003076,2.11e-13,12;UBERON:0003057,2.11e-13,12;UBERON:0000025,1.98e-12,114;UBERON:0002021,3.38e-11,10;UBERON:0000411,3.38e-11,10;UBERON:0001950,3.38e-11,10;UBERON:0004111,8.46e-11,122;UBERON:0002420,5.84e-10,8;UBERON:0007245,5.84e-10,8;UBERON:0010009,5.84e-10,8;UBERON:0010011,5.84e-10,8;UBERON:0000454,5.84e-10,8;UBERON:0001954,7.61e-09,7;UBERON:0003022,7.61e-09,7;UBERON:0002421,7.61e-09,7;UBERON:0000349,7.61e-09,7;UBERON:0002600,7.61e-09,7;UBERON:0002240,1.35e-08,6;UBERON:0005174,1.35e-08,6;UBERON:0001137,1.35e-08,6;UBERON:0001948,1.81e-07,5;UBERON:0002315,1.81e-07,5;UBERON:0000369,5.20e-07,5;UBERON:0002435,5.20e-07,5;UBERON:0000204,5.20e-07,5;UBERON:0010082,5.20e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,2.18025156380447,1.75748946187577,1.36100929351998,1.53985063787899,4.31257693094915,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.80298842103708,0,0,0,0,0,1.79760066311043,2.68952813725088,5.80661828927475,10.2604513132085,9.46462326081219,5.14171771926846,3.97563373712904,3.79721477566358,5.36734637702124,2.75765635983006,2.20231761998777,1.78762273319263,0.614426133024974,2.76961204233407,1.00636407962651,5.2091337055676,2.79182999001381,3.37657566019008,3.0559649555362,5.00868595305235,4.41352210477219,5.03278503728312,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,11.7112318804619,8.3778682725382,0,0,0,0,5.99162557619291,10.5225138648284,7.28795242254614,6.60532416730651,4.34716277461562,5.81806524766768,4.05603157669394,0,0,1.51633655060205,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0.640568601424249,0.562210347358373,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,5.46753866266731,11.6282211988591,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,7.03270119553219,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,1.12738587736838,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,4.60325236507177,4.01026859407578,3.95262319390481,1.37016503954128,4.5323633843382,2.70009000092722,3.60256962579376,1.81256963593682,2.07104124700728,1.14166082342594,3.19219898720825,3.24393850932855,2.43106717068294,0.628839487883947,0.551530525350042,2.22246727801615,1.23621034343337,0.320919209591815,1.26348605881899,1.01391719956096,0.377252682772152,0.561849044819294,0.704276676453562,0.574354689556133,0.476293691283074,0.695305955669133,1.54327376370964,0,0.735994600671987,1.37147700954166,0.887379030796687,0.953744759789284,1.16277133305863,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.814824683075171,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,2.24829520144151,1.40358965067245,1.07435527024149,0.57386499620653,0.220591419119515,0|short_description=p@chr3:88031356..88031360,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=580 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:88031356..88031360,+ | |||
|id=chr3:88031356..88031360,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.90e-18!23;CL:0000337!8.90e-18!23;CL:0002319!2.97e-14!43;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0000055!3.34e-11!50;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000393!1.89e-07!39;CL:0000211!1.89e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-24,23;CL:0000337,9.71e-24,23;CL:0002319,2.97e-18,43;CL:0000221,1.22e-17,44;CL:0000133,1.22e-17,44;CL:0000540,1.86e-14,33;CL:0000047,1.86e-14,33;CL:0000031,1.86e-14,33;CL:0000404,1.86e-14,33;CL:0000393,3.15e-11,39;CL:0000211,3.15e-11,39;CL:0002609,7.30e-09,6;CL:0002321,4.78e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.84e-35!52;UBERON:0005068!4.84e-35!52;UBERON:0006241!4.84e-35!52;UBERON:0007135!4.84e-35!52;UBERON:0000073!2.76e-34!75;UBERON:0001016!2.76e-34!75;UBERON:0001017!7.43e-34!73;UBERON:0005743!7.43e-34!73;UBERON:0000955!4.82e-32!50;UBERON:0006238!4.82e-32!50;UBERON:0002616!3.41e-31!49;UBERON:0000033!6.25e-29!63;UBERON:0002020!2.02e-27!34;UBERON:0002346!3.93e-27!71;UBERON:0003075!3.93e-27!71;UBERON:0007284!3.93e-27!71;UBERON:0003056!1.23e-24!49;UBERON:0004121!1.25e-24!102;UBERON:0000924!1.25e-24!102;UBERON:0006601!1.25e-24!102;UBERON:0003080!2.26e-24!40;UBERON:0002780!2.06e-23!39;UBERON:0001890!2.06e-23!39;UBERON:0006240!2.06e-23!39;UBERON:0002791!5.25e-23!29;UBERON:0003528!5.25e-23!29;UBERON:0001893!5.25e-23!29;UBERON:0007811!5.85e-17!86;UBERON:0000956!6.98e-17!21;UBERON:0001869!6.98e-17!21;UBERON:0000203!6.98e-17!21;UBERON:0000153!7.52e-14!94;UBERON:0002619!4.06e-13!17;UBERON:0003076!6.83e-11!12;UBERON:0003057!6.83e-11!12;UBERON:0000025!3.43e-08!114;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0002420!3.05e-07!8;UBERON:0007245!3.05e-07!8;UBERON:0010009!3.05e-07!8;UBERON:0010011!3.05e-07!8;UBERON:0000454!3.05e-07!8;UBERON:0004111!5.74e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.03e-42,73;UBERON:0001049,3.73e-41,52;UBERON:0005068,3.73e-41,52;UBERON:0006241,3.73e-41,52;UBERON:0007135,3.73e-41,52;UBERON:0000073,8.21e-41,54;UBERON:0001016,1.73e-40,75;UBERON:0002020,7.75e-40,34;UBERON:0000955,1.46e-34,47;UBERON:0006238,1.46e-34,47;UBERON:0002616,2.19e-33,46;UBERON:0003528,2.76e-33,29;UBERON:0002791,2.76e-33,29;UBERON:0001893,2.76e-33,29;UBERON:0002346,6.86e-31,64;UBERON:0003075,6.86e-31,64;UBERON:0007284,6.86e-31,64;UBERON:0004121,1.09e-28,95;UBERON:0000924,1.09e-28,95;UBERON:0006601,1.09e-28,95;UBERON:0003080,8.16e-28,40;UBERON:0002780,1.74e-26,39;UBERON:0001890,1.74e-26,39;UBERON:0006240,1.74e-26,39;UBERON:0010371,1.98e-25,73;UBERON:0000956,3.30e-24,21;UBERON:0001869,3.30e-24,21;UBERON:0000203,3.30e-24,21;UBERON:0003056,7.87e-21,49;UBERON:0002619,1.24e-18,17;UBERON:0010314,1.80e-17,92;UBERON:0003076,2.11e-13,12;UBERON:0003057,2.11e-13,12;UBERON:0000025,1.98e-12,114;UBERON:0002021,3.38e-11,10;UBERON:0000411,3.38e-11,10;UBERON:0001950,3.38e-11,10;UBERON:0004111,8.46e-11,122;UBERON:0002420,5.84e-10,8;UBERON:0007245,5.84e-10,8;UBERON:0010009,5.84e-10,8;UBERON:0010011,5.84e-10,8;UBERON:0000454,5.84e-10,8;UBERON:0001954,7.61e-09,7;UBERON:0003022,7.61e-09,7;UBERON:0002421,7.61e-09,7;UBERON:0000349,7.61e-09,7;UBERON:0002600,7.61e-09,7;UBERON:0002240,1.35e-08,6;UBERON:0005174,1.35e-08,6;UBERON:0001137,1.35e-08,6;UBERON:0001948,1.81e-07,5;UBERON:0002315,1.81e-07,5;UBERON:0000369,5.20e-07,5;UBERON:0002435,5.20e-07,5;UBERON:0000204,5.20e-07,5;UBERON:0010082,5.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,2.18025156380447,1.75748946187577,1.36100929351998,1.53985063787899,4.31257693094915,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.80298842103708,0,0,0,0,0,1.79760066311043,2.68952813725088,5.80661828927475,10.2604513132085,9.46462326081219,5.14171771926846,3.97563373712904,3.79721477566358,5.36734637702124,2.75765635983006,2.20231761998777,1.78762273319263,0.614426133024974,2.76961204233407,1.00636407962651,5.2091337055676,2.79182999001381,3.37657566019008,3.0559649555362,5.00868595305235,4.41352210477219,5.03278503728312,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,11.7112318804619,8.3778682725382,0,0,0,0,5.99162557619291,10.5225138648284,7.28795242254614,6.60532416730651,4.34716277461562,5.81806524766768,4.05603157669394,0,0,1.51633655060205,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0.640568601424249,0.562210347358373,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,5.46753866266731,11.6282211988591,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,7.03270119553219,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,1.12738587736838,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,4.60325236507177,4.01026859407578,3.95262319390481,1.37016503954128,4.5323633843382,2.70009000092722,3.60256962579376,1.81256963593682,2.07104124700728,1.14166082342594,3.19219898720825,3.24393850932855,2.43106717068294,0.628839487883947,0.551530525350042,2.22246727801615,1.23621034343337,0.320919209591815,1.26348605881899,1.01391719956096,0.377252682772152,0.561849044819294,0.704276676453562,0.574354689556133,0.476293691283074,0.695305955669133,1.54327376370964,0,0.735994600671987,1.37147700954166,0.887379030796687,0.953744759789284,1.16277133305863,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.814824683075171,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,2.24829520144151,1.40358965067245,1.07435527024149,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr3:88031356..88031360,+ | |||
}} |
Revision as of 02:45, 14 September 2013
Short description: | p@chr3:88031356..88031360, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:88031356..88031360, + |
Coexpression cluster: | MCL_coexpression_mm9:580 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.71e-24 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-24 | 23 |
neural cell | 2.97e-18 | 43 |
ectodermal cell | 1.22e-17 | 44 |
neurectodermal cell | 1.22e-17 | 44 |
neuron | 1.86e-14 | 33 |
neuronal stem cell | 1.86e-14 | 33 |
neuroblast | 1.86e-14 | 33 |
electrically signaling cell | 1.86e-14 | 33 |
electrically responsive cell | 3.15e-11 | 39 |
electrically active cell | 3.15e-11 | 39 |
neuron of cerebral cortex | 7.30e-09 | 6 |
embryonic cell | 4.78e-08 | 70 |
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