FFCP PHASE1:Mm9::chr2:98502896..98502911,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:98502896..98502911,+|id=chr2:98502896..98502911,+|ontology_enrichment_celltype=CL:0000553!7.56e-12!6;CL:0000556!7.56e-12!6;CL:0000414!3.84e-08!11;CL:0000050!1.41e-07!9;CL:0002027!3.79e-07!3;CL:0002006!3.79e-07!3;CL:0002024!3.79e-07!3|ontology_enrichment_celltype_v019_2=CL:0000553,3.63e-17,6;CL:0000556,3.63e-17,6;CL:0002027,7.42e-16,3;CL:0002006,7.42e-16,3;CL:0002024,7.42e-16,3;CL:0000057,3.34e-12,1;CL:0000632,3.34e-12,1;CL:0000050,1.10e-11,9;CL:0000839,2.75e-08,13;CL:0000763,7.64e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.75e-08,22;UBERON:0004765,1.75e-08,22;UBERON:0001434,1.75e-08,22;UBERON:0002371,7.64e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0.666219523631325,4.45445588257617,2.09868563438444,0.157731082679119,1.23402990245165,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,0,0,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,12.6067565815158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.71853182343688,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr2:98502896..98502911,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:98502896..98502911,+ | |||
|id=chr2:98502896..98502911,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.56e-12!6;CL:0000556!7.56e-12!6;CL:0000414!3.84e-08!11;CL:0000050!1.41e-07!9;CL:0002027!3.79e-07!3;CL:0002006!3.79e-07!3;CL:0002024!3.79e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.63e-17,6;CL:0000556,3.63e-17,6;CL:0002027,7.42e-16,3;CL:0002006,7.42e-16,3;CL:0002024,7.42e-16,3;CL:0000057,3.34e-12,1;CL:0000632,3.34e-12,1;CL:0000050,1.10e-11,9;CL:0000839,2.75e-08,13;CL:0000763,7.64e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.75e-08,22;UBERON:0004765,1.75e-08,22;UBERON:0001434,1.75e-08,22;UBERON:0002371,7.64e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0.666219523631325,4.45445588257617,2.09868563438444,0.157731082679119,1.23402990245165,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,0,0,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,12.6067565815158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.71853182343688,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr2:98502896..98502911,+ | |||
}} |
Revision as of 00:58, 14 September 2013
Short description: | p@chr2:98502896..98502911, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:98502896..98502911, + |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.63e-17 | 6 |
megakaryocyte | 3.63e-17 | 6 |
CD9-positive, CD41-positive megakaryocyte cell | 7.42e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.42e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.42e-16 | 3 |
fibroblast | 3.34e-12 | 1 |
hepatic stellate cell | 3.34e-12 | 1 |
megakaryocyte-erythroid progenitor cell | 1.10e-11 | 9 |
myeloid lineage restricted progenitor cell | 2.75e-08 | 13 |
myeloid cell | 7.64e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.75e-08 | 22 |
skeletal element | 1.75e-08 | 22 |
skeletal system | 1.75e-08 | 22 |
bone marrow | 7.64e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.