FFCP PHASE1:Mm9::chr2:76806533..76806559,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=78|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:76806533..76806559,-|id=chr2:76806533..76806559,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.96e-13!18;UBERON:0000948!7.96e-13!18;UBERON:0005498!7.96e-13!18;UBERON:0004140!7.96e-13!18;UBERON:0009881!7.96e-13!18;UBERON:0004141!7.96e-13!18;UBERON:0003084!7.96e-13!18;UBERON:0007005!7.96e-13!18;UBERON:0004139!7.96e-13!18;UBERON:0004291!7.96e-13!18;UBERON:0004535!8.14e-09!23;UBERON:0001009!8.14e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.52e-23,18;UBERON:0000948,1.52e-23,18;UBERON:0005498,1.52e-23,18;UBERON:0004140,1.52e-23,18;UBERON:0009881,1.52e-23,18;UBERON:0004141,1.52e-23,18;UBERON:0003084,1.52e-23,18;UBERON:0007005,1.52e-23,18;UBERON:0004139,1.52e-23,18;UBERON:0004291,1.52e-23,18;UBERON:0004535,1.60e-17,23;UBERON:0001009,1.60e-17,23;UBERON:0004872,5.38e-11,33;UBERON:0003103,1.32e-08,43;UBERON:0003914,9.78e-08,47;UBERON:0005418,6.71e-07,5;UBERON:0002472,6.71e-07,5;UBERON:0008784,6.71e-07,5;UBERON:0006058,6.71e-07,5;UBERON:0004709,6.71e-07,5;UBERON:0002529,6.71e-07,5;UBERON:0010538,6.71e-07,5;UBERON:0005420,6.71e-07,5;UBERON:0010758,6.71e-07,5;UBERON:0000978,6.71e-07,5;UBERON:0002103,6.71e-07,5;UBERON:0000376,6.71e-07,5;UBERON:0000154,6.71e-07,5;UBERON:0010709,6.71e-07,5;UBERON:0005730,6.71e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0.884610551949874,3.39710384889559,4.41683036920787,6.30337829075789,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0.180062129805349,1.50704817835715,0.612328492361951,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0,0,0,0,1.24275463521301,7.97388603935727,4.32148947506436,3.31442629819294,8.85439042863317,17.123649530499,23.4859284197912,6.70683503499048,13.3112490298573,14.3167069424728,18.7150909050169,5.59374785866405,5.4093995347373,12.7339066868809,5.50246316917524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,10.0637744569148,0,0.312037673114561,0,0.358794827043824,0,0,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,11.1087207969924,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59227005632079,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0,2.00022055021454,2.06035057238894,2.88827288632634,0.758091635291392,2.28131369901216,1.69763707247469,1.03005658216871,0.960377286073039,0.689225627467359,0.476293691283074,1.15884325944855,1.92909220463705,3.70877310722976,1.91358596174717,2.74295401908332,2.8396128985494,3.09967046931517,1.88950341622027,1.78807822789128,1.86152137361688,2.56099162021882,6.57674278594607,1.90125759384206,2.80571135828869,1.66089025373844,3.34915240076916,4.50154147486658,0.619747364743864,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,2.48674831689496,1.32354851471709,0.927471342481686|short_description=p@chr2:76806533..76806559,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=78 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:76806533..76806559,- | |||
|id=chr2:76806533..76806559,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.96e-13!18;UBERON:0000948!7.96e-13!18;UBERON:0005498!7.96e-13!18;UBERON:0004140!7.96e-13!18;UBERON:0009881!7.96e-13!18;UBERON:0004141!7.96e-13!18;UBERON:0003084!7.96e-13!18;UBERON:0007005!7.96e-13!18;UBERON:0004139!7.96e-13!18;UBERON:0004291!7.96e-13!18;UBERON:0004535!8.14e-09!23;UBERON:0001009!8.14e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.52e-23,18;UBERON:0000948,1.52e-23,18;UBERON:0005498,1.52e-23,18;UBERON:0004140,1.52e-23,18;UBERON:0009881,1.52e-23,18;UBERON:0004141,1.52e-23,18;UBERON:0003084,1.52e-23,18;UBERON:0007005,1.52e-23,18;UBERON:0004139,1.52e-23,18;UBERON:0004291,1.52e-23,18;UBERON:0004535,1.60e-17,23;UBERON:0001009,1.60e-17,23;UBERON:0004872,5.38e-11,33;UBERON:0003103,1.32e-08,43;UBERON:0003914,9.78e-08,47;UBERON:0005418,6.71e-07,5;UBERON:0002472,6.71e-07,5;UBERON:0008784,6.71e-07,5;UBERON:0006058,6.71e-07,5;UBERON:0004709,6.71e-07,5;UBERON:0002529,6.71e-07,5;UBERON:0010538,6.71e-07,5;UBERON:0005420,6.71e-07,5;UBERON:0010758,6.71e-07,5;UBERON:0000978,6.71e-07,5;UBERON:0002103,6.71e-07,5;UBERON:0000376,6.71e-07,5;UBERON:0000154,6.71e-07,5;UBERON:0010709,6.71e-07,5;UBERON:0005730,6.71e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0.884610551949874,3.39710384889559,4.41683036920787,6.30337829075789,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0.180062129805349,1.50704817835715,0.612328492361951,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0,0,0,0,1.24275463521301,7.97388603935727,4.32148947506436,3.31442629819294,8.85439042863317,17.123649530499,23.4859284197912,6.70683503499048,13.3112490298573,14.3167069424728,18.7150909050169,5.59374785866405,5.4093995347373,12.7339066868809,5.50246316917524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,10.0637744569148,0,0.312037673114561,0,0.358794827043824,0,0,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,11.1087207969924,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59227005632079,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0,2.00022055021454,2.06035057238894,2.88827288632634,0.758091635291392,2.28131369901216,1.69763707247469,1.03005658216871,0.960377286073039,0.689225627467359,0.476293691283074,1.15884325944855,1.92909220463705,3.70877310722976,1.91358596174717,2.74295401908332,2.8396128985494,3.09967046931517,1.88950341622027,1.78807822789128,1.86152137361688,2.56099162021882,6.57674278594607,1.90125759384206,2.80571135828869,1.66089025373844,3.34915240076916,4.50154147486658,0.619747364743864,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,2.48674831689496,1.32354851471709,0.927471342481686 | |||
|short_description=p@chr2:76806533..76806559,- | |||
}} |
Revision as of 00:40, 14 September 2013
Short description: | p@chr2:76806533..76806559, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:76806533..76806559, - |
Coexpression cluster: | MCL_coexpression_mm9:78 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.52e-23 | 18 |
heart | 1.52e-23 | 18 |
primitive heart tube | 1.52e-23 | 18 |
primary heart field | 1.52e-23 | 18 |
anterior lateral plate mesoderm | 1.52e-23 | 18 |
heart tube | 1.52e-23 | 18 |
heart primordium | 1.52e-23 | 18 |
cardiac mesoderm | 1.52e-23 | 18 |
cardiogenic plate | 1.52e-23 | 18 |
heart rudiment | 1.52e-23 | 18 |
cardiovascular system | 1.60e-17 | 23 |
circulatory system | 1.60e-17 | 23 |
splanchnic layer of lateral plate mesoderm | 5.38e-11 | 33 |
compound organ | 1.32e-08 | 43 |
epithelial tube | 9.78e-08 | 47 |
hindlimb bud | 6.71e-07 | 5 |
stylopod | 6.71e-07 | 5 |
lower limb segment | 6.71e-07 | 5 |
multi-limb segment region | 6.71e-07 | 5 |
pelvic appendage | 6.71e-07 | 5 |
limb segment | 6.71e-07 | 5 |
paired limb/fin segment | 6.71e-07 | 5 |
pelvic appendage bud | 6.71e-07 | 5 |
subdivision of organism along appendicular axis | 6.71e-07 | 5 |
leg | 6.71e-07 | 5 |
hindlimb | 6.71e-07 | 5 |
hindlimb stylopod | 6.71e-07 | 5 |
posterior region of body | 6.71e-07 | 5 |
pelvic complex | 6.71e-07 | 5 |
hindlimb/pelvic fin field | 6.71e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.