FFCP PHASE1:Mm9::chr2:74518687..74518718,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1428|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:74518687..74518718,+|id=chr2:74518687..74518718,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.26e-15!21;UBERON:0001008!2.81e-13!17;UBERON:0006554!1.20e-12!16;UBERON:0002113!2.04e-11!14;UBERON:0003918!2.04e-11!14;UBERON:0005095!2.04e-11!14;UBERON:0007687!2.04e-11!14;UBERON:0005156!2.41e-11!26;UBERON:0000990!2.41e-11!26;UBERON:0003133!4.52e-10!24;UBERON:0000474!3.74e-08!9;UBERON:0000991!1.57e-07!18;UBERON:0005564!1.57e-07!18;UBERON:0003134!2.89e-07!8;UBERON:0002102!6.26e-07!8;UBERON:0004710!6.26e-07!8;UBERON:0005419!6.26e-07!8;UBERON:0005417!6.26e-07!8;UBERON:0005729!6.26e-07!8;UBERON:0004176!6.71e-07!17;UBERON:0009196!6.71e-07!17;UBERON:0009117!6.71e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.06e-21,21;UBERON:0001008,2.35e-16,19;UBERON:0006554,2.11e-15,18;UBERON:0002113,2.41e-15,14;UBERON:0003918,2.41e-15,14;UBERON:0011143,2.41e-15,14;UBERON:0005095,2.41e-15,14;UBERON:0007687,2.41e-15,14;UBERON:0002102,1.03e-11,7;UBERON:0004710,1.03e-11,7;UBERON:0005419,1.03e-11,7;UBERON:0005417,1.03e-11,7;UBERON:0005729,1.03e-11,7;UBERON:0010708,4.69e-10,8;UBERON:0000474,4.76e-08,9;UBERON:0001948,6.47e-08,5;UBERON:0002315,6.47e-08,5;UBERON:0003103,6.53e-08,43;UBERON:0005156,3.38e-07,26;UBERON:0000990,3.38e-07,26;UBERON:0003134,8.51e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,5.30331453852602,6.40672563595963,3.72798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,1.15307748628029,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17541391786297,0.124406970610093,0,0,0,0,0,0,0,0,0,0,4.52692785158969,5.67318240503458,14.6039433056078,8.98702502953057,17.2389294519871,4.87553033131033,10.4948889568051,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49301775374664,2.78684006232526,1.67527699718721,1.21010114774006,0.667134131534611,0.760902504450237,0,0.329397909448022,0.754005626400808,0.397912944082302,0,0,0.216138049874694,0,14.4147604724342,15.3093006897037,20.2873924211545,20.5687841123767,22.304536024277,14.2375714377347,20.2989284168866,2.80459281161244,2.66897837330337,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,9.97167380536629,5.70104357737516,4.78413356620353,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,3.28540391289194,0.21183207086382,0.882113592219848,0,0.161464426695906,0.422190474497091,0.477489376012546,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0,0,0,1.03691978633434,0,0,0.448549638131936,0.496375471371293,3.11121901350476,0.774958940866387,1.68956125490778,0.469428954583016,2.47388331203505,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,2.51146472241848,4.69206188627955,6.95976172215607,1.2862102744744,2.50786052017682,0,0,0,0,0,0,0,0,0,0,1.24544817101012,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,1.2869045591501,0.888986911206461,1.03017528619447,1.28367683836726,0.758091635291392,1.01391719956096,1.13175804831646,1.40462261204824,0.89635213366817,0.861532034334199,0.952587382566147,1.39061191133827,1.54327376370964,0.824171801606613,0.883193520806384,0.685738504770831,1.24233064311536,0.238436189947321,1.16277133305863,1.03520318456864,1.69229215783353,1.09756783723664,2.10455769150274,0.543216455383447,2.80571135828869,1.06771516311757,0.788035859004508,1.63692417267876,0.309873682371932,0.964533054905707,0,1.40358965067245,0.214871054048298,1.72159498861959,0.661774257358546,0.695603506861264|short_description=p@chr2:74518687..74518718,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1428 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:74518687..74518718,+ | |||
|id=chr2:74518687..74518718,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.26e-15!21;UBERON:0001008!2.81e-13!17;UBERON:0006554!1.20e-12!16;UBERON:0002113!2.04e-11!14;UBERON:0003918!2.04e-11!14;UBERON:0005095!2.04e-11!14;UBERON:0007687!2.04e-11!14;UBERON:0005156!2.41e-11!26;UBERON:0000990!2.41e-11!26;UBERON:0003133!4.52e-10!24;UBERON:0000474!3.74e-08!9;UBERON:0000991!1.57e-07!18;UBERON:0005564!1.57e-07!18;UBERON:0003134!2.89e-07!8;UBERON:0002102!6.26e-07!8;UBERON:0004710!6.26e-07!8;UBERON:0005419!6.26e-07!8;UBERON:0005417!6.26e-07!8;UBERON:0005729!6.26e-07!8;UBERON:0004176!6.71e-07!17;UBERON:0009196!6.71e-07!17;UBERON:0009117!6.71e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.06e-21,21;UBERON:0001008,2.35e-16,19;UBERON:0006554,2.11e-15,18;UBERON:0002113,2.41e-15,14;UBERON:0003918,2.41e-15,14;UBERON:0011143,2.41e-15,14;UBERON:0005095,2.41e-15,14;UBERON:0007687,2.41e-15,14;UBERON:0002102,1.03e-11,7;UBERON:0004710,1.03e-11,7;UBERON:0005419,1.03e-11,7;UBERON:0005417,1.03e-11,7;UBERON:0005729,1.03e-11,7;UBERON:0010708,4.69e-10,8;UBERON:0000474,4.76e-08,9;UBERON:0001948,6.47e-08,5;UBERON:0002315,6.47e-08,5;UBERON:0003103,6.53e-08,43;UBERON:0005156,3.38e-07,26;UBERON:0000990,3.38e-07,26;UBERON:0003134,8.51e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,5.30331453852602,6.40672563595963,3.72798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,1.15307748628029,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17541391786297,0.124406970610093,0,0,0,0,0,0,0,0,0,0,4.52692785158969,5.67318240503458,14.6039433056078,8.98702502953057,17.2389294519871,4.87553033131033,10.4948889568051,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49301775374664,2.78684006232526,1.67527699718721,1.21010114774006,0.667134131534611,0.760902504450237,0,0.329397909448022,0.754005626400808,0.397912944082302,0,0,0.216138049874694,0,14.4147604724342,15.3093006897037,20.2873924211545,20.5687841123767,22.304536024277,14.2375714377347,20.2989284168866,2.80459281161244,2.66897837330337,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,9.97167380536629,5.70104357737516,4.78413356620353,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,3.28540391289194,0.21183207086382,0.882113592219848,0,0.161464426695906,0.422190474497091,0.477489376012546,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0,0,0,1.03691978633434,0,0,0.448549638131936,0.496375471371293,3.11121901350476,0.774958940866387,1.68956125490778,0.469428954583016,2.47388331203505,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,2.51146472241848,4.69206188627955,6.95976172215607,1.2862102744744,2.50786052017682,0,0,0,0,0,0,0,0,0,0,1.24544817101012,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,1.2869045591501,0.888986911206461,1.03017528619447,1.28367683836726,0.758091635291392,1.01391719956096,1.13175804831646,1.40462261204824,0.89635213366817,0.861532034334199,0.952587382566147,1.39061191133827,1.54327376370964,0.824171801606613,0.883193520806384,0.685738504770831,1.24233064311536,0.238436189947321,1.16277133305863,1.03520318456864,1.69229215783353,1.09756783723664,2.10455769150274,0.543216455383447,2.80571135828869,1.06771516311757,0.788035859004508,1.63692417267876,0.309873682371932,0.964533054905707,0,1.40358965067245,0.214871054048298,1.72159498861959,0.661774257358546,0.695603506861264 | |||
|short_description=p@chr2:74518687..74518718,+ | |||
}} |
Revision as of 00:32, 14 September 2013
Short description: | p@chr2:74518687..74518718, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:74518687..74518718, + |
Coexpression cluster: | MCL_coexpression_mm9:1428 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.06e-21 | 21 |
renal system | 2.35e-16 | 19 |
urinary system structure | 2.11e-15 | 18 |
kidney | 2.41e-15 | 14 |
kidney mesenchyme | 2.41e-15 | 14 |
upper urinary tract | 2.41e-15 | 14 |
kidney rudiment | 2.41e-15 | 14 |
kidney field | 2.41e-15 | 14 |
forelimb | 1.03e-11 | 7 |
pectoral appendage | 1.03e-11 | 7 |
pectoral appendage bud | 1.03e-11 | 7 |
forelimb bud | 1.03e-11 | 7 |
forelimb/pectoral fin field | 1.03e-11 | 7 |
pectoral complex | 4.69e-10 | 8 |
female reproductive system | 4.76e-08 | 9 |
regional part of spinal cord | 6.47e-08 | 5 |
gray matter of spinal cord | 6.47e-08 | 5 |
compound organ | 6.53e-08 | 43 |
reproductive structure | 3.38e-07 | 26 |
reproductive system | 3.38e-07 | 26 |
female reproductive organ | 8.51e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.