FFCP PHASE1:Hg19::chr7:16955191..16955205,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C330|description=CAGE_peak_at_chr7:16955191..16955205,+|id=chr7:16955191..16955205,+|ontology_enrichment_celltype=CL:0002076!6.97e-13!43;CL:0002537!1.07e-10!5;CL:0000223!1.14e-10!59;CL:0002251!1.69e-08!21;CL:0000066!9.56e-08!254|ontology_enrichment_celltype_v019=CL:0002537;2.54e-23;5!CL:1000415;1.78e-15;2!CL:0000322;6.73e-11;3!CL:0000083;2.11e-08;4!CL:0000349;7.18e-07;19|ontology_enrichment_celltype_v019_2=CL:0002537,2.54e-23,5;CL:1000415,2.05e-15,2;CL:0000322,6.73e-11,3;CL:0000083,1.96e-08,4;CL:0000349,7.18e-07,19|ontology_enrichment_development_v019=UBERON:0000358;1.78e-29;1|ontology_enrichment_disease=DOID:1749!3.32e-17!14;DOID:305!6.36e-14!106;DOID:0050687!1.81e-10!143;DOID:299!1.25e-09!25|ontology_enrichment_disease_v019=DOID:3910;1.15e-15;2!DOID:4074;1.78e-15;2!DOID:4905;1.78e-15;2!DOID:3498;1.78e-15;2!DOID:1793;2.11e-08;4!DOID:3908;4.79e-07;5|ontology_enrichment_disease_v019_2=DOID:3910,1.15e-15,2;DOID:4074,1.54e-15,2;DOID:4905,1.54e-15,2;DOID:3498,1.54e-15,2;DOID:1793,1.96e-08,4;DOID:3908,4.79e-07,5|ontology_enrichment_uberon=UBERON:0005631!3.36e-18!14;UBERON:0000158!3.36e-18!14;UBERON:0000478!2.21e-13!24;UBERON:0000305!5.41e-13!7;UBERON:0003343!3.50e-12!4;UBERON:0004785!3.50e-12!4;UBERON:0004871!2.22e-11!8;UBERON:0003729!7.59e-10!5;UBERON:0004923!2.91e-09!57;UBERON:0002294!1.24e-07!7;UBERON:0001173!1.24e-07!7;UBERON:0004912!1.24e-07!7;UBERON:0003124!2.59e-07!7;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169;UBERON:0000344!3.54e-07!12|ontology_enrichment_uberon_v019=UBERON:0000305;5.57e-17;7!UBERON:0004903;1.15e-15;2!UBERON:0002173;1.15e-15;2!UBERON:0002186;1.15e-15;2!UBERON:0005631;3.34e-12;10!UBERON:0000158;3.34e-12;10!UBERON:0000478;2.90e-11;24!UBERON:0004821;6.73e-11;3!UBERON:0007499;6.73e-11;3!UBERON:0003215;6.73e-11;3!UBERON:0010368;6.73e-11;3!UBERON:0009911;6.73e-11;3!UBERON:0002299;6.73e-11;3!UBERON:0006524;6.73e-11;3!UBERON:0008874;6.73e-11;3!UBERON:0002169;6.73e-11;3!UBERON:0004894;6.73e-11;3!UBERON:0002110;8.99e-11;3!UBERON:0009856;1.70e-08;4!UBERON:0002075;2.86e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0000305,5.57e-17,7;UBERON:0004903,1.15e-15,2;UBERON:0002173,1.15e-15,2;UBERON:0002186,1.15e-15,2;UBERON:0004871,5.41e-15,8;UBERON:0000478,2.90e-11,24;UBERON:0004821,6.73e-11,3;UBERON:0003215,6.73e-11,3;UBERON:0010368,6.73e-11,3;UBERON:0009911,6.73e-11,3;UBERON:0002299,6.73e-11,3;UBERON:0006524,6.73e-11,3;UBERON:0008874,6.73e-11,3;UBERON:0002169,6.73e-11,3;UBERON:0004894,6.73e-11,3;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0005631,5.36e-09,14;UBERON:0000158,5.36e-09,14;UBERON:0002075,2.86e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0.95497793895076,1.18785872333055,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0.455173793141999,6.86484855790469,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,2.15106521008283,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr7:16955191..16955205,+ | |||
|id=chr7:16955191..16955205,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.97e-13!43;CL:0002537!1.07e-10!5;CL:0000223!1.14e-10!59;CL:0002251!1.69e-08!21;CL:0000066!9.56e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.54e-23;5!CL:1000415;1.78e-15;2!CL:0000322;6.73e-11;3!CL:0000083;2.11e-08;4!CL:0000349;7.18e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.54e-23,5;CL:1000415,2.05e-15,2;CL:0000322,6.73e-11,3;CL:0000083,1.96e-08,4;CL:0000349,7.18e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.78e-29;1 | |||
|ontology_enrichment_disease=DOID:1749!3.32e-17!14;DOID:305!6.36e-14!106;DOID:0050687!1.81e-10!143;DOID:299!1.25e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.15e-15;2!DOID:4074;1.78e-15;2!DOID:4905;1.78e-15;2!DOID:3498;1.78e-15;2!DOID:1793;2.11e-08;4!DOID:3908;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.15e-15,2;DOID:4074,1.54e-15,2;DOID:4905,1.54e-15,2;DOID:3498,1.54e-15,2;DOID:1793,1.96e-08,4;DOID:3908,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.36e-18!14;UBERON:0000158!3.36e-18!14;UBERON:0000478!2.21e-13!24;UBERON:0000305!5.41e-13!7;UBERON:0003343!3.50e-12!4;UBERON:0004785!3.50e-12!4;UBERON:0004871!2.22e-11!8;UBERON:0003729!7.59e-10!5;UBERON:0004923!2.91e-09!57;UBERON:0002294!1.24e-07!7;UBERON:0001173!1.24e-07!7;UBERON:0004912!1.24e-07!7;UBERON:0003124!2.59e-07!7;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169;UBERON:0000344!3.54e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;5.57e-17;7!UBERON:0004903;1.15e-15;2!UBERON:0002173;1.15e-15;2!UBERON:0002186;1.15e-15;2!UBERON:0005631;3.34e-12;10!UBERON:0000158;3.34e-12;10!UBERON:0000478;2.90e-11;24!UBERON:0004821;6.73e-11;3!UBERON:0007499;6.73e-11;3!UBERON:0003215;6.73e-11;3!UBERON:0010368;6.73e-11;3!UBERON:0009911;6.73e-11;3!UBERON:0002299;6.73e-11;3!UBERON:0006524;6.73e-11;3!UBERON:0008874;6.73e-11;3!UBERON:0002169;6.73e-11;3!UBERON:0004894;6.73e-11;3!UBERON:0002110;8.99e-11;3!UBERON:0009856;1.70e-08;4!UBERON:0002075;2.86e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,5.57e-17,7;UBERON:0004903,1.15e-15,2;UBERON:0002173,1.15e-15,2;UBERON:0002186,1.15e-15,2;UBERON:0004871,5.41e-15,8;UBERON:0000478,2.90e-11,24;UBERON:0004821,6.73e-11,3;UBERON:0003215,6.73e-11,3;UBERON:0010368,6.73e-11,3;UBERON:0009911,6.73e-11,3;UBERON:0002299,6.73e-11,3;UBERON:0006524,6.73e-11,3;UBERON:0008874,6.73e-11,3;UBERON:0002169,6.73e-11,3;UBERON:0004894,6.73e-11,3;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0005631,5.36e-09,14;UBERON:0000158,5.36e-09,14;UBERON:0002075,2.86e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0.95497793895076,1.18785872333055,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0.455173793141999,6.86484855790469,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,2.15106521008283,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr7:16955191..16955205,+ | |||
}} |
Revision as of 00:18, 14 September 2013
Short description: | p@chr7:16955191..16955205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16955191..16955205, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.54e-23 | 5 |
epithelial cell of gall bladder | 2.05e-15 | 2 |
pneumocyte | 6.73e-11 | 3 |
epithelial cell of pancreas | 1.96e-08 | 4 |
extraembryonic cell | 7.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 5.57e-17 | 7 |
bronchoalveolar duct junction | 1.15e-15 | 2 |
alveolar duct | 1.15e-15 | 2 |
bronchiole | 1.15e-15 | 2 |
somatic layer of lateral plate mesoderm | 5.41e-15 | 8 |
extraembryonic structure | 2.90e-11 | 24 |
pulmonary alveolus epithelium | 6.73e-11 | 3 |
alveolus | 6.73e-11 | 3 |
pulmonary lobule | 6.73e-11 | 3 |
lobule | 6.73e-11 | 3 |
alveolus of lung | 6.73e-11 | 3 |
alveolar system | 6.73e-11 | 3 |
pulmonary acinus | 6.73e-11 | 3 |
alveolar sac | 6.73e-11 | 3 |
alveolar wall | 6.73e-11 | 3 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
extraembryonic membrane | 5.36e-09 | 14 |
membranous layer | 5.36e-09 | 14 |
viscus | 2.86e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.15e-15 | 2 |
pancreas adenocarcinoma | 1.54e-15 | 2 |
pancreatic carcinoma | 1.54e-15 | 2 |
pancreatic ductal adenocarcinoma | 1.54e-15 | 2 |
pancreatic cancer | 1.96e-08 | 4 |
non-small cell lung carcinoma | 4.79e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.