FFCP PHASE1:Hg19::chr7:158224707..158224729,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:158224707..158224729,-|id=chr7:158224707..158224729,-|ontology_enrichment_celltype=CL:0002564!3.30e-07!3|ontology_enrichment_celltype_v019=CL:0002564;5.25e-30;3!CL:0002602;1.29e-20;2|ontology_enrichment_celltype_v019_2=CL:0002564,7.46e-30,3;CL:0002602,5.20e-21,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.40e-08!169;UBERON:0000925!1.40e-08!169;UBERON:0006595!1.40e-08!169;UBERON:0004921!5.91e-08!129;UBERON:0004185!5.91e-08!129;UBERON:0002242!3.30e-07!3;UBERON:0003068!3.30e-07!3;UBERON:0002328!3.30e-07!3;UBERON:0004880!3.30e-07!3|ontology_enrichment_uberon_v019=UBERON:0011135;8.73e-49;5!UBERON:0002216;8.73e-49;5!UBERON:0011134;8.73e-49;5!UBERON:0002209;8.73e-49;5!UBERON:0002213;8.73e-49;5!UBERON:0007844;8.73e-49;5!UBERON:0011138;8.73e-49;5!UBERON:0001130;8.73e-49;5!UBERON:0001066;8.73e-49;5!UBERON:0001468;8.73e-49;5!UBERON:0004905;1.55e-30;8!UBERON:0000982;1.55e-30;8!UBERON:0004770;1.55e-30;8!UBERON:0002242;5.25e-30;3!UBERON:0006444;1.29e-20;2!UBERON:0001995;1.29e-20;2!UBERON:0004715;1.29e-20;2!UBERON:0000075;2.85e-15;16!UBERON:0002418;4.42e-14;3!UBERON:0004755;4.42e-14;3!UBERON:0004765;3.24e-13;26!UBERON:0002331;1.09e-09;10|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.06e-49,5;UBERON:0002216,5.06e-49,5;UBERON:0011134,5.06e-49,5;UBERON:0002209,5.06e-49,5;UBERON:0002213,5.06e-49,5;UBERON:0005856,5.06e-49,5;UBERON:0005866,5.06e-49,5;UBERON:0005863,5.06e-49,5;UBERON:0007844,5.06e-49,5;UBERON:0011138,5.06e-49,5;UBERON:0001130,5.06e-49,5;UBERON:0001066,5.06e-49,5;UBERON:0001468,5.06e-49,5;UBERON:0004905,1.10e-30,8;UBERON:0000982,1.10e-30,8;UBERON:0004770,1.10e-30,8;UBERON:0002242,7.46e-30,3;UBERON:0003068,7.46e-30,3;UBERON:0002328,7.46e-30,3;UBERON:0004880,7.46e-30,3;UBERON:0006444,5.20e-21,2;UBERON:0001995,5.20e-21,2;UBERON:0004715,5.20e-21,2;UBERON:0000075,2.42e-15,16;UBERON:0002418,2.42e-14,3;UBERON:0004755,2.42e-14,3;UBERON:0002331,1.18e-09,10;UBERON:0000358,1.18e-09,10;UBERON:0000307,1.18e-09,10;UBERON:0000091,1.18e-09,10;UBERON:0000087,1.18e-09,10;UBERON:0007010,1.18e-09,10;UBERON:0007806,1.18e-09,10;UBERON:0008780,1.18e-09,10;UBERON:0005728,1.18e-09,10;UBERON:0011137,7.58e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0,0,1.8564952944007,1.98838425436749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0.580066775656914,0,0.0890320356467374,0.495854746082934,0.576570202095319,5.74257206225629,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.282431402330337,0,0,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68959351514601,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0.895105873378046,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,9.78519724646052,1.23563938946503,2.08843899010911,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,3.90840890477681,0,0,1.98595173525299,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.951329442515298,1.04602846312333,1.01998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,11.2951023779692,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.930053882193542,1.63565394255844,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0.499705779624645,0.892769693028288,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.372448285775147,0,0,0,0,0,0,0.860666464712116,0.332660356546013,0,0,0,0,0,0.733448665097199,0,0.665756774185513,0,0|short_description=p@chr7:158224707..158224729,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:158224707..158224729,- | |||
|id=chr7:158224707..158224729,- | |||
|ontology_enrichment_celltype=CL:0002564!3.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.25e-30;3!CL:0002602;1.29e-20;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,7.46e-30,3;CL:0002602,5.20e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.40e-08!169;UBERON:0000925!1.40e-08!169;UBERON:0006595!1.40e-08!169;UBERON:0004921!5.91e-08!129;UBERON:0004185!5.91e-08!129;UBERON:0002242!3.30e-07!3;UBERON:0003068!3.30e-07!3;UBERON:0002328!3.30e-07!3;UBERON:0004880!3.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.73e-49;5!UBERON:0002216;8.73e-49;5!UBERON:0011134;8.73e-49;5!UBERON:0002209;8.73e-49;5!UBERON:0002213;8.73e-49;5!UBERON:0007844;8.73e-49;5!UBERON:0011138;8.73e-49;5!UBERON:0001130;8.73e-49;5!UBERON:0001066;8.73e-49;5!UBERON:0001468;8.73e-49;5!UBERON:0004905;1.55e-30;8!UBERON:0000982;1.55e-30;8!UBERON:0004770;1.55e-30;8!UBERON:0002242;5.25e-30;3!UBERON:0006444;1.29e-20;2!UBERON:0001995;1.29e-20;2!UBERON:0004715;1.29e-20;2!UBERON:0000075;2.85e-15;16!UBERON:0002418;4.42e-14;3!UBERON:0004755;4.42e-14;3!UBERON:0004765;3.24e-13;26!UBERON:0002331;1.09e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.06e-49,5;UBERON:0002216,5.06e-49,5;UBERON:0011134,5.06e-49,5;UBERON:0002209,5.06e-49,5;UBERON:0002213,5.06e-49,5;UBERON:0005856,5.06e-49,5;UBERON:0005866,5.06e-49,5;UBERON:0005863,5.06e-49,5;UBERON:0007844,5.06e-49,5;UBERON:0011138,5.06e-49,5;UBERON:0001130,5.06e-49,5;UBERON:0001066,5.06e-49,5;UBERON:0001468,5.06e-49,5;UBERON:0004905,1.10e-30,8;UBERON:0000982,1.10e-30,8;UBERON:0004770,1.10e-30,8;UBERON:0002242,7.46e-30,3;UBERON:0003068,7.46e-30,3;UBERON:0002328,7.46e-30,3;UBERON:0004880,7.46e-30,3;UBERON:0006444,5.20e-21,2;UBERON:0001995,5.20e-21,2;UBERON:0004715,5.20e-21,2;UBERON:0000075,2.42e-15,16;UBERON:0002418,2.42e-14,3;UBERON:0004755,2.42e-14,3;UBERON:0002331,1.18e-09,10;UBERON:0000358,1.18e-09,10;UBERON:0000307,1.18e-09,10;UBERON:0000091,1.18e-09,10;UBERON:0000087,1.18e-09,10;UBERON:0007010,1.18e-09,10;UBERON:0007806,1.18e-09,10;UBERON:0008780,1.18e-09,10;UBERON:0005728,1.18e-09,10;UBERON:0011137,7.58e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0,0,1.8564952944007,1.98838425436749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0.580066775656914,0,0.0890320356467374,0.495854746082934,0.576570202095319,5.74257206225629,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.282431402330337,0,0,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68959351514601,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0.895105873378046,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,9.78519724646052,1.23563938946503,2.08843899010911,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,3.90840890477681,0,0,1.98595173525299,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.951329442515298,1.04602846312333,1.01998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,11.2951023779692,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.930053882193542,1.63565394255844,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0.499705779624645,0.892769693028288,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.372448285775147,0,0,0,0,0,0,0.860666464712116,0.332660356546013,0,0,0,0,0,0.733448665097199,0,0.665756774185513,0,0 | |||
|short_description=p@chr7:158224707..158224729,- | |||
}} |
Revision as of 00:15, 14 September 2013
Short description: | p@chr7:158224707..158224729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:158224707..158224729, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 7.46e-30 | 3 |
annulus pulposus cell | 5.20e-21 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.