FFCP PHASE1:Mm9::chr2:31939170..31939271,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241303|HGNC=|MCL_coexpression_id=0|UniProt=A2ATN4,Q8C552|association_with_transcript=0bp_to_NM_175511,uc008jek.1_5end|description=CAGE_peak_1_at_Fam78a_5end|id=chr2:31939170..31939271,-|ontology_enrichment_celltype=CL:0002031!1.39e-09!25;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32|ontology_enrichment_celltype_v019_2=CL:0002031,5.31e-10,25;CL:0000988,6.03e-09,32;CL:0002032,6.03e-09,32;CL:0000037,6.03e-09,32;CL:0000837,6.03e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.85e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0003081!1.78e-13!88;UBERON:0002390!1.86e-13!45;UBERON:0003061!1.86e-13!45;UBERON:0004177!4.48e-09!29;UBERON:0005057!2.42e-08!51;UBERON:0001007!5.68e-08!128;UBERON:0001555!5.68e-08!128;UBERON:0007026!5.68e-08!128;UBERON:0004119!6.74e-08!130;UBERON:0000925!6.74e-08!130;UBERON:0006595!6.74e-08!130;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0001048!2.18e-07!147;UBERON:0005911!4.41e-07!69;UBERON:0000926!5.25e-07!193;UBERON:0004120!5.25e-07!193;UBERON:0006603!5.25e-07!193;UBERON:0002370!7.73e-07!23;UBERON:0000974!7.73e-07!23;UBERON:0004807!7.73e-07!23;UBERON:0005058!7.73e-07!23;UBERON:0003351!7.73e-07!23;UBERON:0009113!7.73e-07!23;UBERON:0003295!7.73e-07!23;UBERON:0009722!7.73e-07!23;UBERON:0005562!7.73e-07!23;UBERON:0007690!7.73e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.25e-16,48;UBERON:0002405,9.25e-16,48;UBERON:0002390,1.07e-14,45;UBERON:0003061,1.07e-14,45;UBERON:0003081,3.49e-14,87;UBERON:0001007,4.32e-10,116;UBERON:0001555,4.32e-10,116;UBERON:0007026,4.32e-10,116;UBERON:0004177,4.47e-10,29;UBERON:0005057,4.47e-10,29;UBERON:0004119,5.58e-10,118;UBERON:0000925,5.58e-10,118;UBERON:0006595,5.58e-10,118;UBERON:0004921,1.21e-09,114;UBERON:0001048,5.95e-09,134;UBERON:0000926,7.23e-09,120;UBERON:0004120,7.23e-09,120;UBERON:0006603,7.23e-09,120;UBERON:0000077,4.83e-08,35;UBERON:0005911,6.33e-08,69;UBERON:0002370,1.08e-07,23;UBERON:0000974,1.08e-07,23;UBERON:0004807,1.08e-07,23;UBERON:0005058,1.08e-07,23;UBERON:0003351,1.08e-07,23;UBERON:0009113,1.08e-07,23;UBERON:0003295,1.08e-07,23;UBERON:0009722,1.08e-07,23;UBERON:0005562,1.08e-07,23;UBERON:0007690,1.08e-07,23;UBERON:0006562,1.67e-07,24;UBERON:0001557,1.67e-07,24;UBERON:0001042,1.67e-07,24;UBERON:0008814,1.67e-07,24;UBERON:0009145,1.67e-07,24;UBERON:0003408,2.40e-07,24|phase1_expression=0.160148847104794,12.2141392673776,13.1949779422965,16.3330674105688,25.0447864973174,1.17515490338323,1.40167584357315,34.2176807120177,3.94208422024667,5.14941957908386,2.91070545983358,4.3874687447435,68.4802919724823,87.5078228214164,8.32774404539157,14.5782192520675,11.1929900500503,18.2968055907778,20.978508341678,11.4585205985468,60.976039038317,18.5674078745655,11.4927907221132,5.27974995218242,6.42345986988076,5.7423196411502,3.87685796543167,4.52489588640367,19.3823887845501,12.0974462284767,3.32595765982957,12.7006134691926,26.4477858661365,63.3926724061755,0.288851619751275,0.664938581433969,0.408338712524738,0.837063261473815,0.7813353445238,2.09409497589519,0,0.683045484958446,1.45653105909346,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,3.18786951509699,34.8173828165445,45.7087566833751,0,0.573066879877513,1.03134418455488,0,0,0,0,0,19.7977937801908,10.8775299882367,12.7886420690298,4.49400165777607,2.68952813725088,0.103689612308478,0.270011876663381,0.420649922702764,0,0.220868540951614,0.367472397644862,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.302904773332736,0.151143120213571,5.50742528533188,0.860423876981386,0,0,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0,13.0169622879728,32.1082975722493,4.15637989381509,0.867426633830679,0.913396434936424,0.922461989024234,0.452167921657868,1.17588707135705,0.879666139307728,0.494389935468748,1.59059292611903,19.4614321428972,5.3383060482645,9.27534377533653,11.6370060752453,5.59175283654366,0.292780797011547,0.41889341362691,19.1592791406444,3.23500836165985,2.99951365496704,3.17675567682662,0.149790639404823,2.28750301409313,0.125654352112864,0.869121600961382,0.767146371990992,0.20778804455956,0.486723789203273,1.01839363850316,7.0911973247753,0.252722758433675,2.10441855886474,1.04096354370163,0.459804208866946,1.0803727788321,1.35634336052144,0.340182495756639,0.384341160854549,0.562210347358373,5.17406741478031,0.431135985865684,0.378212160335639,1.05570674498369,3.28793598641362,1.11218899690239,2.78601733217733,1.02891068203972,0.796137067273973,2.1066395619397,3.86021860672073,5.11494298912067,18.8484453007307,16.1822981386956,12.064158117888,14.678173606283,10.4285042826124,8.94749254746794,13.0219009060228,10.4626626545851,7.00592054203017,14.3167069424728,6.56669856316381,9.80932595504854,12.8655988934292,14.7098577245004,7.1129401942997,0,0.205809224758569,35.3548097792664,14.8092317331585,0.426576501070468,0.928946687441754,1.54640953586512,1.21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| ||
|EntrezGene=241303 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2ATN4,Q8C552 | |||
|association_with_transcript=0bp_to_NM_175511,uc008jek.1_5end | |||
|description=CAGE_peak_1_at_Fam78a_5end | |||
|id=chr2:31939170..31939271,- | |||
|ontology_enrichment_celltype=CL:0002031!1.39e-09!25;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.31e-10,25;CL:0000988,6.03e-09,32;CL:0002032,6.03e-09,32;CL:0000037,6.03e-09,32;CL:0000837,6.03e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.85e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0003081!1.78e-13!88;UBERON:0002390!1.86e-13!45;UBERON:0003061!1.86e-13!45;UBERON:0004177!4.48e-09!29;UBERON:0005057!2.42e-08!51;UBERON:0001007!5.68e-08!128;UBERON:0001555!5.68e-08!128;UBERON:0007026!5.68e-08!128;UBERON:0004119!6.74e-08!130;UBERON:0000925!6.74e-08!130;UBERON:0006595!6.74e-08!130;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0001048!2.18e-07!147;UBERON:0005911!4.41e-07!69;UBERON:0000926!5.25e-07!193;UBERON:0004120!5.25e-07!193;UBERON:0006603!5.25e-07!193;UBERON:0002370!7.73e-07!23;UBERON:0000974!7.73e-07!23;UBERON:0004807!7.73e-07!23;UBERON:0005058!7.73e-07!23;UBERON:0003351!7.73e-07!23;UBERON:0009113!7.73e-07!23;UBERON:0003295!7.73e-07!23;UBERON:0009722!7.73e-07!23;UBERON:0005562!7.73e-07!23;UBERON:0007690!7.73e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.25e-16,48;UBERON:0002405,9.25e-16,48;UBERON:0002390,1.07e-14,45;UBERON:0003061,1.07e-14,45;UBERON:0003081,3.49e-14,87;UBERON:0001007,4.32e-10,116;UBERON:0001555,4.32e-10,116;UBERON:0007026,4.32e-10,116;UBERON:0004177,4.47e-10,29;UBERON:0005057,4.47e-10,29;UBERON:0004119,5.58e-10,118;UBERON:0000925,5.58e-10,118;UBERON:0006595,5.58e-10,118;UBERON:0004921,1.21e-09,114;UBERON:0001048,5.95e-09,134;UBERON:0000926,7.23e-09,120;UBERON:0004120,7.23e-09,120;UBERON:0006603,7.23e-09,120;UBERON:0000077,4.83e-08,35;UBERON:0005911,6.33e-08,69;UBERON:0002370,1.08e-07,23;UBERON:0000974,1.08e-07,23;UBERON:0004807,1.08e-07,23;UBERON:0005058,1.08e-07,23;UBERON:0003351,1.08e-07,23;UBERON:0009113,1.08e-07,23;UBERON:0003295,1.08e-07,23;UBERON:0009722,1.08e-07,23;UBERON:0005562,1.08e-07,23;UBERON:0007690,1.08e-07,23;UBERON:0006562,1.67e-07,24;UBERON:0001557,1.67e-07,24;UBERON:0001042,1.67e-07,24;UBERON:0008814,1.67e-07,24;UBERON:0009145,1.67e-07,24;UBERON:0003408,2.40e-07,24 | |||
|phase1_expression=0.160148847104794,12.2141392673776,13.1949779422965,16.3330674105688,25.0447864973174,1.17515490338323,1.40167584357315,34.2176807120177,3.94208422024667,5.14941957908386,2.91070545983358,4.3874687447435,68.4802919724823,87.5078228214164,8.32774404539157,14.5782192520675,11.1929900500503,18.2968055907778,20.978508341678,11.4585205985468,60.976039038317,18.5674078745655,11.4927907221132,5.27974995218242,6.42345986988076,5.7423196411502,3.87685796543167,4.52489588640367,19.3823887845501,12.0974462284767,3.32595765982957,12.7006134691926,26.4477858661365,63.3926724061755,0.288851619751275,0.664938581433969,0.408338712524738,0.837063261473815,0.7813353445238,2.09409497589519,0,0.683045484958446,1.45653105909346,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,3.18786951509699,34.8173828165445,45.7087566833751,0,0.573066879877513,1.03134418455488,0,0,0,0,0,19.7977937801908,10.8775299882367,12.7886420690298,4.49400165777607,2.68952813725088,0.103689612308478,0.270011876663381,0.420649922702764,0,0.220868540951614,0.367472397644862,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.302904773332736,0.151143120213571,5.50742528533188,0.860423876981386,0,0,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0,13.0169622879728,32.1082975722493,4.15637989381509,0.867426633830679,0.913396434936424,0.922461989024234,0.452167921657868,1.17588707135705,0.879666139307728,0.494389935468748,1.59059292611903,19.4614321428972,5.3383060482645,9.27534377533653,11.6370060752453,5.59175283654366,0.292780797011547,0.41889341362691,19.1592791406444,3.23500836165985,2.99951365496704,3.17675567682662,0.149790639404823,2.28750301409313,0.125654352112864,0.869121600961382,0.767146371990992,0.20778804455956,0.486723789203273,1.01839363850316,7.0911973247753,0.252722758433675,2.10441855886474,1.04096354370163,0.459804208866946,1.0803727788321,1.35634336052144,0.340182495756639,0.384341160854549,0.562210347358373,5.17406741478031,0.431135985865684,0.378212160335639,1.05570674498369,3.28793598641362,1.11218899690239,2.78601733217733,1.02891068203972,0.796137067273973,2.1066395619397,3.86021860672073,5.11494298912067,18.8484453007307,16.1822981386956,12.064158117888,14.678173606283,10.4285042826124,8.94749254746794,13.0219009060228,10.4626626545851,7.00592054203017,14.3167069424728,6.56669856316381,9.80932595504854,12.8655988934292,14.7098577245004,7.1129401942997,0,0.205809224758569,35.3548097792664,14.8092317331585,0.426576501070468,0.928946687441754,1.54640953586512,1.21010114774006,2.89091456998331,2.66315876557583,16.1339880925134,10.7054320570607,7.54005626400809,7.56034593756373,8.96834800747953,14.3811105384675,6.05186539649144,13.541606581297,0,1.25673363870702,1.1270773567308,1.01825663922657,0.775809948670503,0.350679099451593,0.69560190836683,0.295220295959204,1.09899109488962,0.493588655687202,2.37162101669719,13.0139182458553,13.9556886530374,15.2906236421701,14.6059287399722,9.64708639009667,8.65727896056827,8.63088412352432,5.5125977103512,4.11842119782122,7.18841032636773,3.34926852901653,3.43241440426017,2.77836765741823,1.4351793081753,1.92977408545347,6.09685527549795,1.70542270593436,1.14075483509418,1.52770577197669,2.58159273117352,2.51259386162724,4.76087281772027,3.90267295715598,4.57141917907954,5.75808193086815,5.58091690301205,4.26044618260919,6.56202931090403,5.35201516751593,12.0633027151418,8.70249094109935,2.95058563811422,1.10374698521893,0.160550589987792,0.117211686592203,0,2.01976741763498,0,0,0,0,0.222798674082394,0,0,0,0,0,6.81312408999689,1.06839362200353,0.651547837414304,1.31976098378028,0,0.728341908464944,1.209294227859,0.565815239267694,1.77181135728464,2.76691633149535,3.35956781118687,0,2.13898427030833,3.79244109522979,0,1.03135543248187,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.532020700926821,0.356737635204141,0.822745103010605,0.304464949114599,2.11204537257339,1.48282449604674,0,0.65954501176592,1.13025098687134,1.44751019827574,0.358117032009409,1.14898629821543,14.8655226681224,0.18542530201051,19.1375386493595,4.33412422722767,6.48180845793991,15.6345819313894,23.7847956234584,16.4720284708696,1.5298058699447,4.19854356970974,3.17859939750175,0,0.949007980743406,1.01659733563424,0.756037385752609,0.627264888043406,0.655087691238533,2.02296519577231,1.1571483801547,0.523511883968059,6.22151871800606,1.24267862617385,607.660987901557,1.34564891439581,2.15096037594227,3.69457257853691,4.00395452780966,3.04121025883401,3.16864544343536,2.47388331203505,3.46035836604846,0.966336483304024,163.601043554468,58.7780684368412,4.86540516696394,8.11416561602135,13.3818447667129,21.3041767844303,37.9481387632216,40.2654755891896,36.0362446305968,38.266284530348,49.3058039057849,51.9254853454729,57.9874390401527,55.0331734182684,73.9830790809331,2.26730383615211,0,0.179427713218951,0,1.35232715822533,2.25218970541418,0.73260649706906,0.643105137237198,1.50471631210609,0.564751842617067,0,0.572895513439397,0.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| |||
|short_description=p1@Fam78a | |||
}} | |||
Revision as of 23:45, 13 September 2013
| Short description: | p1@Fam78a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Fam78a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 0bp_to_NM_175511, uc008jek.1_5end |
| EntrezGene: | Fam78a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 5.31e-10 | 25 |
| hematopoietic cell | 6.03e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 6.03e-09 | 32 |
| hematopoietic stem cell | 6.03e-09 | 32 |
| hematopoietic multipotent progenitor cell | 6.03e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
