FFCP PHASE1:Hg19::chr7:141900897..141900901,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C690|description=CAGE_peak_at_chr7:141900897..141900901,+|id=chr7:141900897..141900901,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0006298;7.62e-26;1!UBERON:0008801;7.62e-26;1!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001829!2.34e-11!2;UBERON:0003127!2.72e-10!2|ontology_enrichment_uberon_v019=UBERON:0001829;8.49e-50;2!UBERON:0001831;7.62e-26;1!UBERON:0001736;7.62e-26;1!UBERON:0002134;7.62e-26;1!UBERON:0005208;7.62e-26;1!UBERON:0004145;7.62e-26;1!UBERON:0005946;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0005965;7.62e-26;1!UBERON:0002078;7.62e-26;1!UBERON:0001044;2.19e-17;6!UBERON:0003293;2.19e-17;6!UBERON:0003294;2.19e-17;6!UBERON:0010047;2.19e-17;6!UBERON:0003408;2.19e-17;6!UBERON:0000167;2.19e-17;6!UBERON:0004921;3.29e-17;33!UBERON:0002081;1.21e-13;2!UBERON:0002133;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0000160;4.54e-13;17!UBERON:0001155;5.08e-12;9!UBERON:0005409;2.23e-10;22!UBERON:0000059;5.17e-10;11!UBERON:0003978;1.53e-09;3!UBERON:0004151;1.53e-09;3!UBERON:0000946;1.53e-09;3!UBERON:0001041;5.18e-08;14!UBERON:0001555;5.92e-08;54|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.50e-50,2;UBERON:0001736,4.61e-26,1;UBERON:0006298,4.61e-26,1;UBERON:0002134,9.79e-26,1;UBERON:0005208,9.79e-26,1;UBERON:0005946,9.79e-26,1;UBERON:0005965,9.79e-26,1;UBERON:0002078,9.79e-26,1;UBERON:0001831,1.26e-25,1;UBERON:0001567,1.26e-25,1;UBERON:0008801,1.26e-25,1;UBERON:0001044,2.19e-17,6;UBERON:0003293,2.19e-17,6;UBERON:0003294,2.19e-17,6;UBERON:0010047,2.19e-17,6;UBERON:0000167,2.19e-17,6;UBERON:0002081,1.37e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0004089,1.55e-13,2;UBERON:0000160,4.27e-13,17;UBERON:0001155,4.94e-12,9;UBERON:0003408,7.67e-11,10;UBERON:0000059,5.06e-10,11;UBERON:0003978,1.67e-09,3;UBERON:0009751,1.67e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0000946,1.67e-09,3;UBERON:0002523,1.67e-09,3;UBERON:0005983,1.67e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0002165,1.67e-09,3;UBERON:0002062,1.67e-09,3;UBERON:0007280,1.67e-09,3;UBERON:0005409,2.82e-09,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,2.4441205797345,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0.647428837187895,0,0,0,0,0,0,0,0,0,1.54348316215889,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p@chr7:141900897..141900901,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C690 | |||
|description=CAGE_peak_at_chr7:141900897..141900901,+ | |||
|id=chr7:141900897..141900901,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0006298;7.62e-26;1!UBERON:0008801;7.62e-26;1!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!2.34e-11!2;UBERON:0003127!2.72e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.49e-50;2!UBERON:0001831;7.62e-26;1!UBERON:0001736;7.62e-26;1!UBERON:0002134;7.62e-26;1!UBERON:0005208;7.62e-26;1!UBERON:0004145;7.62e-26;1!UBERON:0005946;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0005965;7.62e-26;1!UBERON:0002078;7.62e-26;1!UBERON:0001044;2.19e-17;6!UBERON:0003293;2.19e-17;6!UBERON:0003294;2.19e-17;6!UBERON:0010047;2.19e-17;6!UBERON:0003408;2.19e-17;6!UBERON:0000167;2.19e-17;6!UBERON:0004921;3.29e-17;33!UBERON:0002081;1.21e-13;2!UBERON:0002133;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0000160;4.54e-13;17!UBERON:0001155;5.08e-12;9!UBERON:0005409;2.23e-10;22!UBERON:0000059;5.17e-10;11!UBERON:0003978;1.53e-09;3!UBERON:0004151;1.53e-09;3!UBERON:0000946;1.53e-09;3!UBERON:0001041;5.18e-08;14!UBERON:0001555;5.92e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.50e-50,2;UBERON:0001736,4.61e-26,1;UBERON:0006298,4.61e-26,1;UBERON:0002134,9.79e-26,1;UBERON:0005208,9.79e-26,1;UBERON:0005946,9.79e-26,1;UBERON:0005965,9.79e-26,1;UBERON:0002078,9.79e-26,1;UBERON:0001831,1.26e-25,1;UBERON:0001567,1.26e-25,1;UBERON:0008801,1.26e-25,1;UBERON:0001044,2.19e-17,6;UBERON:0003293,2.19e-17,6;UBERON:0003294,2.19e-17,6;UBERON:0010047,2.19e-17,6;UBERON:0000167,2.19e-17,6;UBERON:0002081,1.37e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0004089,1.55e-13,2;UBERON:0000160,4.27e-13,17;UBERON:0001155,4.94e-12,9;UBERON:0003408,7.67e-11,10;UBERON:0000059,5.06e-10,11;UBERON:0003978,1.67e-09,3;UBERON:0009751,1.67e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0000946,1.67e-09,3;UBERON:0002523,1.67e-09,3;UBERON:0005983,1.67e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0002165,1.67e-09,3;UBERON:0002062,1.67e-09,3;UBERON:0007280,1.67e-09,3;UBERON:0005409,2.82e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,2.4441205797345,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0.647428837187895,0,0,0,0,0,0,0,0,0,1.54348316215889,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr7:141900897..141900901,+ | |||
}} |
Revision as of 23:37, 13 September 2013
Short description: | p@chr7:141900897..141900901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:141900897..141900901, + |
Coexpression cluster: | C690_duodenum_small_temporal_gall_colon_Neurons_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.50e-50 | 2 |
submandibular gland | 4.61e-26 | 1 |
submandibular gland primordium | 4.61e-26 | 1 |
tricuspid valve | 9.79e-26 | 1 |
right atrium valve | 9.79e-26 | 1 |
outflow tract of atrium | 9.79e-26 | 1 |
outflow part of right atrium | 9.79e-26 | 1 |
right cardiac atrium | 9.79e-26 | 1 |
parotid gland | 1.26e-25 | 1 |
cheek | 1.26e-25 | 1 |
parotid gland primordium | 1.26e-25 | 1 |
saliva-secreting gland | 2.19e-17 | 6 |
gland of oral region | 2.19e-17 | 6 |
gland of foregut | 2.19e-17 | 6 |
oral gland | 2.19e-17 | 6 |
oral cavity | 2.19e-17 | 6 |
cardiac atrium | 1.37e-13 | 2 |
atrioventricular valve | 1.37e-13 | 2 |
future cardiac atrium | 1.37e-13 | 2 |
midface | 1.55e-13 | 2 |
intestine | 4.27e-13 | 17 |
colon | 4.94e-12 | 9 |
gland of gut | 7.67e-11 | 10 |
large intestine | 5.06e-10 | 11 |
valve | 1.67e-09 | 3 |
cardiac mesenchyme | 1.67e-09 | 3 |
cardiac chamber | 1.67e-09 | 3 |
cardial valve | 1.67e-09 | 3 |
tunica intima | 1.67e-09 | 3 |
heart layer | 1.67e-09 | 3 |
outflow tract | 1.67e-09 | 3 |
endocardium | 1.67e-09 | 3 |
endocardial cushion | 1.67e-09 | 3 |
presumptive endocardium | 1.67e-09 | 3 |
gastrointestinal system | 2.82e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.