FFCP PHASE1:Mm9::chr2:177927780..177927804,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74189|HGNC=|MCL_coexpression_id=1|UniProt=Q8BYK5,Q6KCA9|association_with_transcript=0bp_to_ENSMUST00000103065,NM_001007154,uc008ohm.2_5end|description=CAGE_peak_4_at_Phactr3_5end|id=chr2:177927780..177927804,+|ontology_enrichment_celltype=CL:0000117!2.21e-10!23;CL:0000337!2.21e-10!23;CL:0000540!4.94e-08!33;CL:0000047!4.94e-08!33;CL:0000031!4.94e-08!33;CL:0000404!4.94e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.71e-10,23;CL:0000337,8.71e-10,23;CL:0002610,5.35e-09,3;CL:0002614,3.67e-08,3;CL:0002611,5.18e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.25e-27!52;UBERON:0005068!6.25e-27!52;UBERON:0006241!6.25e-27!52;UBERON:0007135!6.25e-27!52;UBERON:0000955!1.30e-26!50;UBERON:0006238!1.30e-26!50;UBERON:0001017!4.04e-26!73;UBERON:0005743!4.04e-26!73;UBERON:0002616!3.16e-25!49;UBERON:0000073!4.35e-25!75;UBERON:0001016!4.35e-25!75;UBERON:0002020!5.67e-23!34;UBERON:0000033!1.16e-21!63;UBERON:0002346!2.73e-19!71;UBERON:0003075!2.73e-19!71;UBERON:0007284!2.73e-19!71;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0003080!2.57e-18!40;UBERON:0004121!3.43e-17!102;UBERON:0000924!3.43e-17!102;UBERON:0006601!3.43e-17!102;UBERON:0002780!4.59e-17!39;UBERON:0001890!4.59e-17!39;UBERON:0006240!4.59e-17!39;UBERON:0003056!4.81e-16!49;UBERON:0002021!4.73e-14!10;UBERON:0000411!4.73e-14!10;UBERON:0001950!4.73e-14!10;UBERON:0002619!5.40e-14!17;UBERON:0007811!5.04e-13!86;UBERON:0000956!1.56e-12!21;UBERON:0001869!1.56e-12!21;UBERON:0000203!1.56e-12!21;UBERON:0000153!4.75e-11!94;UBERON:0002298!1.76e-09!6;UBERON:0003076!2.87e-09!12;UBERON:0003057!2.87e-09!12;UBERON:0000025!4.21e-08!114;UBERON:0002420!1.10e-07!8;UBERON:0007245!1.10e-07!8;UBERON:0010009!1.10e-07!8;UBERON:0010011!1.10e-07!8;UBERON:0000454!1.10e-07!8;UBERON:0004111!6.07e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-39,54;UBERON:0001049,4.47e-35,52;UBERON:0005068,4.47e-35,52;UBERON:0006241,4.47e-35,52;UBERON:0007135,4.47e-35,52;UBERON:0001017,2.54e-32,73;UBERON:0001016,2.69e-31,75;UBERON:0000955,5.05e-28,47;UBERON:0006238,5.05e-28,47;UBERON:0002346,2.04e-27,64;UBERON:0003075,2.04e-27,64;UBERON:0007284,2.04e-27,64;UBERON:0002020,5.72e-27,34;UBERON:0002616,6.34e-26,46;UBERON:0002021,2.17e-24,10;UBERON:0000411,2.17e-24,10;UBERON:0001950,2.17e-24,10;UBERON:0004121,2.03e-23,95;UBERON:0000924,2.03e-23,95;UBERON:0006601,2.03e-23,95;UBERON:0010371,2.55e-23,73;UBERON:0003080,3.94e-20,40;UBERON:0003528,5.86e-20,29;UBERON:0002791,5.86e-20,29;UBERON:0001893,5.86e-20,29;UBERON:0002780,3.09e-18,39;UBERON:0001890,3.09e-18,39;UBERON:0006240,3.09e-18,39;UBERON:0010314,2.69e-17,92;UBERON:0003076,1.24e-16,12;UBERON:0003057,1.24e-16,12;UBERON:0002619,1.54e-16,17;UBERON:0000956,9.70e-16,21;UBERON:0001869,9.70e-16,21;UBERON:0000203,9.70e-16,21;UBERON:0003056,1.20e-15,49;UBERON:0000025,8.01e-13,114;UBERON:0004111,1.36e-11,122;UBERON:0002240,2.93e-11,6;UBERON:0005174,2.93e-11,6;UBERON:0001137,2.93e-11,6;UBERON:0002950,6.84e-11,4;UBERON:0001891,6.84e-11,4;UBERON:0009616,6.84e-11,4;UBERON:0010286,6.84e-11,4;UBERON:0004684,5.35e-09,3;UBERON:0002275,5.35e-09,3;UBERON:0001948,8.36e-09,5;UBERON:0002315,8.36e-09,5;UBERON:0011216,3.15e-08,194;UBERON:0002038,3.67e-08,3;UBERON:0009663,3.67e-08,3;UBERON:0009661,3.67e-08,3;UBERON:0000125,3.67e-08,3;UBERON:0002308,3.67e-08,3;UBERON:0004733,3.73e-07,6;UBERON:0004732,3.73e-07,6;UBERON:0002028,3.73e-07,6;UBERON:0007277,3.73e-07,6;UBERON:0002256,5.18e-07,2;UBERON:0001896,9.27e-07,2;UBERON:0002298,9.27e-07,2;UBERON:0005290,9.27e-07,2;UBERON:0010096,9.27e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,11.4260393761521,11.4851641294839,0,0.0958454710182364,0.919218786610021,8.8092704799511,9.44886301830389,9.5236050618871,0.131886287730194,0.0914876436024097,0,8.37548997004143,6.19038871034848,7.63991238884051,5.89257170947335,4.41352210477219,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,2.93225389538837,0,0,0,0,13.7807388252437,16.4700217014706,0.628271760564322,10.081810571152,9.2057564638919,11.4283424507758,8.11206315338788,0,0,0,0,0,0,0,0,0.204109497453984,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,9.49414661396846,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,15.1021018718249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,7.36520378411483,8.59343270159095,6.01486138202907,8.22099023724771,9.06472676867641,6.75022500231806,9.00642406448441,7.70342095273148,7.7664046762773,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0|short_description=p4@Phactr3}} | ||
|EntrezGene=74189 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BYK5,Q6KCA9 | |||
|association_with_transcript=0bp_to_ENSMUST00000103065,NM_001007154,uc008ohm.2_5end | |||
|description=CAGE_peak_4_at_Phactr3_5end | |||
|id=chr2:177927780..177927804,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.21e-10!23;CL:0000337!2.21e-10!23;CL:0000540!4.94e-08!33;CL:0000047!4.94e-08!33;CL:0000031!4.94e-08!33;CL:0000404!4.94e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.71e-10,23;CL:0000337,8.71e-10,23;CL:0002610,5.35e-09,3;CL:0002614,3.67e-08,3;CL:0002611,5.18e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.25e-27!52;UBERON:0005068!6.25e-27!52;UBERON:0006241!6.25e-27!52;UBERON:0007135!6.25e-27!52;UBERON:0000955!1.30e-26!50;UBERON:0006238!1.30e-26!50;UBERON:0001017!4.04e-26!73;UBERON:0005743!4.04e-26!73;UBERON:0002616!3.16e-25!49;UBERON:0000073!4.35e-25!75;UBERON:0001016!4.35e-25!75;UBERON:0002020!5.67e-23!34;UBERON:0000033!1.16e-21!63;UBERON:0002346!2.73e-19!71;UBERON:0003075!2.73e-19!71;UBERON:0007284!2.73e-19!71;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0003080!2.57e-18!40;UBERON:0004121!3.43e-17!102;UBERON:0000924!3.43e-17!102;UBERON:0006601!3.43e-17!102;UBERON:0002780!4.59e-17!39;UBERON:0001890!4.59e-17!39;UBERON:0006240!4.59e-17!39;UBERON:0003056!4.81e-16!49;UBERON:0002021!4.73e-14!10;UBERON:0000411!4.73e-14!10;UBERON:0001950!4.73e-14!10;UBERON:0002619!5.40e-14!17;UBERON:0007811!5.04e-13!86;UBERON:0000956!1.56e-12!21;UBERON:0001869!1.56e-12!21;UBERON:0000203!1.56e-12!21;UBERON:0000153!4.75e-11!94;UBERON:0002298!1.76e-09!6;UBERON:0003076!2.87e-09!12;UBERON:0003057!2.87e-09!12;UBERON:0000025!4.21e-08!114;UBERON:0002420!1.10e-07!8;UBERON:0007245!1.10e-07!8;UBERON:0010009!1.10e-07!8;UBERON:0010011!1.10e-07!8;UBERON:0000454!1.10e-07!8;UBERON:0004111!6.07e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-39,54;UBERON:0001049,4.47e-35,52;UBERON:0005068,4.47e-35,52;UBERON:0006241,4.47e-35,52;UBERON:0007135,4.47e-35,52;UBERON:0001017,2.54e-32,73;UBERON:0001016,2.69e-31,75;UBERON:0000955,5.05e-28,47;UBERON:0006238,5.05e-28,47;UBERON:0002346,2.04e-27,64;UBERON:0003075,2.04e-27,64;UBERON:0007284,2.04e-27,64;UBERON:0002020,5.72e-27,34;UBERON:0002616,6.34e-26,46;UBERON:0002021,2.17e-24,10;UBERON:0000411,2.17e-24,10;UBERON:0001950,2.17e-24,10;UBERON:0004121,2.03e-23,95;UBERON:0000924,2.03e-23,95;UBERON:0006601,2.03e-23,95;UBERON:0010371,2.55e-23,73;UBERON:0003080,3.94e-20,40;UBERON:0003528,5.86e-20,29;UBERON:0002791,5.86e-20,29;UBERON:0001893,5.86e-20,29;UBERON:0002780,3.09e-18,39;UBERON:0001890,3.09e-18,39;UBERON:0006240,3.09e-18,39;UBERON:0010314,2.69e-17,92;UBERON:0003076,1.24e-16,12;UBERON:0003057,1.24e-16,12;UBERON:0002619,1.54e-16,17;UBERON:0000956,9.70e-16,21;UBERON:0001869,9.70e-16,21;UBERON:0000203,9.70e-16,21;UBERON:0003056,1.20e-15,49;UBERON:0000025,8.01e-13,114;UBERON:0004111,1.36e-11,122;UBERON:0002240,2.93e-11,6;UBERON:0005174,2.93e-11,6;UBERON:0001137,2.93e-11,6;UBERON:0002950,6.84e-11,4;UBERON:0001891,6.84e-11,4;UBERON:0009616,6.84e-11,4;UBERON:0010286,6.84e-11,4;UBERON:0004684,5.35e-09,3;UBERON:0002275,5.35e-09,3;UBERON:0001948,8.36e-09,5;UBERON:0002315,8.36e-09,5;UBERON:0011216,3.15e-08,194;UBERON:0002038,3.67e-08,3;UBERON:0009663,3.67e-08,3;UBERON:0009661,3.67e-08,3;UBERON:0000125,3.67e-08,3;UBERON:0002308,3.67e-08,3;UBERON:0004733,3.73e-07,6;UBERON:0004732,3.73e-07,6;UBERON:0002028,3.73e-07,6;UBERON:0007277,3.73e-07,6;UBERON:0002256,5.18e-07,2;UBERON:0001896,9.27e-07,2;UBERON:0002298,9.27e-07,2;UBERON:0005290,9.27e-07,2;UBERON:0010096,9.27e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,11.4260393761521,11.4851641294839,0,0.0958454710182364,0.919218786610021,8.8092704799511,9.44886301830389,9.5236050618871,0.131886287730194,0.0914876436024097,0,8.37548997004143,6.19038871034848,7.63991238884051,5.89257170947335,4.41352210477219,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,2.93225389538837,0,0,0,0,13.7807388252437,16.4700217014706,0.628271760564322,10.081810571152,9.2057564638919,11.4283424507758,8.11206315338788,0,0,0,0,0,0,0,0,0.204109497453984,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,9.49414661396846,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,15.1021018718249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,7.36520378411483,8.59343270159095,6.01486138202907,8.22099023724771,9.06472676867641,6.75022500231806,9.00642406448441,7.70342095273148,7.7664046762773,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p4@Phactr3 | |||
}} |
Revision as of 23:09, 13 September 2013
Short description: | p4@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103065, NM_001007154, uc008ohm.2_5end |
EntrezGene: | Phactr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.71e-10 | 23 |
raphe nuclei neuron | 5.35e-09 | 3 |
neuron of the substantia nigra | 3.67e-08 | 3 |
neuron of the dorsal spinal cord | 5.18e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.