FFCP PHASE1:Mm9::chr2:157397040..157397052,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53619|HGNC=|MCL_coexpression_id=477|UniProt=G3UWQ6|association_with_transcript=-30bp_to_ENSMUST00000173378,ENSMUST00000174336_5end|description=CAGE_peak_8_at_Blcap_5end|id=chr2:157397040..157397052,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000764,1.86e-12,3;CL:0000765,1.86e-12,3;CL:0000038,1.86e-12,3;CL:0000547,1.86e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.86e-12,3;DOID:0060083,1.86e-12,3;DOID:1240,1.86e-12,3|ontology_enrichment_uberon=UBERON:0000007!1.90e-15!8;UBERON:0003296!1.90e-15!8;UBERON:0010133!1.90e-15!8;UBERON:0001894!5.66e-12!10;UBERON:0006222!5.66e-12!10|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.59e-54,8;UBERON:0003296,8.59e-54,8;UBERON:0010133,8.59e-54,8;UBERON:0001894,4.82e-43,10;UBERON:0006222,4.82e-43,10;UBERON:0002780,6.52e-11,39;UBERON:0001890,6.52e-11,39;UBERON:0006240,6.52e-11,39;UBERON:0003080,1.24e-10,40;UBERON:0002616,3.33e-09,46;UBERON:0002368,4.85e-09,60;UBERON:0000955,5.31e-09,47;UBERON:0006238,5.31e-09,47;UBERON:0003056,1.28e-08,49;UBERON:0002530,2.62e-08,65;UBERON:0001049,4.21e-08,52;UBERON:0005068,4.21e-08,52;UBERON:0006241,4.21e-08,52;UBERON:0007135,4.21e-08,52;UBERON:0000073,8.67e-08,54;UBERON:0000949,1.89e-07,72|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.6012218806262,5.30370603509293,5.35842587578981,9.57637261668277,4.63758925765383,5.26556865926787,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p8@Blcap}} | ||
|EntrezGene=53619 | |||
|HGNC= | |||
|MCL_coexpression_id=477 | |||
|UniProt=G3UWQ6 | |||
|association_with_transcript=-30bp_to_ENSMUST00000173378,ENSMUST00000174336_5end | |||
|description=CAGE_peak_8_at_Blcap_5end | |||
|id=chr2:157397040..157397052,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.86e-12,3;CL:0000765,1.86e-12,3;CL:0000038,1.86e-12,3;CL:0000547,1.86e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.86e-12,3;DOID:0060083,1.86e-12,3;DOID:1240,1.86e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.90e-15!8;UBERON:0003296!1.90e-15!8;UBERON:0010133!1.90e-15!8;UBERON:0001894!5.66e-12!10;UBERON:0006222!5.66e-12!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.59e-54,8;UBERON:0003296,8.59e-54,8;UBERON:0010133,8.59e-54,8;UBERON:0001894,4.82e-43,10;UBERON:0006222,4.82e-43,10;UBERON:0002780,6.52e-11,39;UBERON:0001890,6.52e-11,39;UBERON:0006240,6.52e-11,39;UBERON:0003080,1.24e-10,40;UBERON:0002616,3.33e-09,46;UBERON:0002368,4.85e-09,60;UBERON:0000955,5.31e-09,47;UBERON:0006238,5.31e-09,47;UBERON:0003056,1.28e-08,49;UBERON:0002530,2.62e-08,65;UBERON:0001049,4.21e-08,52;UBERON:0005068,4.21e-08,52;UBERON:0006241,4.21e-08,52;UBERON:0007135,4.21e-08,52;UBERON:0000073,8.67e-08,54;UBERON:0000949,1.89e-07,72 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.6012218806262,5.30370603509293,5.35842587578981,9.57637261668277,4.63758925765383,5.26556865926787,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Blcap | |||
}} |
Revision as of 22:40, 13 September 2013
Short description: | p8@Blcap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Blcap_5end |
Coexpression cluster: | MCL_coexpression_mm9:477 |
Association with transcript: | -30bp_to_ENSMUST00000173378, ENSMUST00000174336_5end |
EntrezGene: | Blcap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.86e-12 | 3 |
erythroblast | 1.86e-12 | 3 |
erythroid progenitor cell | 1.86e-12 | 3 |
proerythroblast | 1.86e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.59e-54 | 8 |
gland of diencephalon | 8.59e-54 | 8 |
neuroendocrine gland | 8.59e-54 | 8 |
diencephalon | 4.82e-43 | 10 |
future diencephalon | 4.82e-43 | 10 |
regional part of forebrain | 6.52e-11 | 39 |
forebrain | 6.52e-11 | 39 |
future forebrain | 6.52e-11 | 39 |
anterior neural tube | 1.24e-10 | 40 |
regional part of brain | 3.33e-09 | 46 |
endocrine gland | 4.85e-09 | 60 |
brain | 5.31e-09 | 47 |
future brain | 5.31e-09 | 47 |
pre-chordal neural plate | 1.28e-08 | 49 |
gland | 2.62e-08 | 65 |
neural tube | 4.21e-08 | 52 |
neural rod | 4.21e-08 | 52 |
future spinal cord | 4.21e-08 | 52 |
neural keel | 4.21e-08 | 52 |
regional part of nervous system | 8.67e-08 | 54 |
endocrine system | 1.89e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.86e-12 | 3 |
immune system cancer | 1.86e-12 | 3 |
leukemia | 1.86e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.