FFCP PHASE1:Hg19::chr7:100808394..100808436,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7425|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12684|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000445482_5end|coexpression_cluster_id=C4634|description=CAGE_peak_2_at_VGF_5end|id=chr7:100808394..100808436,-|ontology_enrichment_celltype=CL:0000540!1.63e-11!6;CL:0000031!1.63e-11!6;CL:0000404!1.63e-11!6;CL:0000047!3.79e-11!8|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.09e-15;82!UBERON:0010122;6.77e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;5.68e-10;2|ontology_enrichment_disease_v019_2=DOID:1909,5.56e-10,2|ontology_enrichment_uberon=UBERON:0001017!1.11e-56!82;UBERON:0005743!2.08e-55!86;UBERON:0002780!4.29e-55!41;UBERON:0001890!4.29e-55!41;UBERON:0006240!4.29e-55!41;UBERON:0003080!1.54e-53!42;UBERON:0001869!4.38e-53!32;UBERON:0001893!8.77e-53!34;UBERON:0002020!2.22e-52!34;UBERON:0003528!2.22e-52!34;UBERON:0001049!4.46e-51!57;UBERON:0005068!4.46e-51!57;UBERON:0006241!4.46e-51!57;UBERON:0007135!4.46e-51!57;UBERON:0000073!6.41e-51!94;UBERON:0001016!6.41e-51!94;UBERON:0002791!9.34e-51!33;UBERON:0002616!6.27e-49!59;UBERON:0000955!1.85e-46!69;UBERON:0006238!1.85e-46!69;UBERON:0002619!6.30e-42!22;UBERON:0000956!2.47e-39!25;UBERON:0000203!2.47e-39!25;UBERON:0001950!6.55e-38!20;UBERON:0002346!3.70e-36!90;UBERON:0003056!1.75e-35!61;UBERON:0003075!7.28e-35!86;UBERON:0007284!7.28e-35!86;UBERON:0000924!1.83e-27!173;UBERON:0006601!1.83e-27!173;UBERON:0004121!3.53e-26!169;UBERON:0000033!2.49e-25!123;UBERON:0000153!1.61e-23!129;UBERON:0007811!1.61e-23!129;UBERON:0007023!2.43e-23!115;UBERON:0002420!4.98e-15!9;UBERON:0007245!4.98e-15!9;UBERON:0010009!4.98e-15!9;UBERON:0010011!4.98e-15!9;UBERON:0000454!4.98e-15!9;UBERON:0002308!3.17e-14!9;UBERON:0000125!3.17e-14!9;UBERON:0000200!2.92e-13!6;UBERON:0001871!4.25e-13!7;UBERON:0000349!1.39e-11!5;UBERON:0001872!2.95e-11!5;UBERON:0009663!3.49e-11!7;UBERON:0002021!5.04e-11!5;UBERON:0000369!8.45e-10!4;UBERON:0002435!8.45e-10!4;UBERON:0000204!8.45e-10!4;UBERON:0010082!8.45e-10!4;UBERON:0000025!3.48e-09!194;UBERON:0005383!8.93e-08!3;UBERON:0005382!8.93e-08!3;UBERON:0002771!2.69e-07!3|ontology_enrichment_uberon_v019=UBERON:0001869;6.08e-80;32!UBERON:0002619;6.49e-78;22!UBERON:0001893;1.31e-74;34!UBERON:0002791;1.48e-74;32!UBERON:0001950;1.06e-69;20!UBERON:0003528;1.17e-68;34!UBERON:0002020;1.17e-68;34!UBERON:0000956;2.54e-68;25!UBERON:0000203;2.54e-68;25!UBERON:0002780;6.11e-60;41!UBERON:0001890;6.11e-60;41!UBERON:0000073;3.94e-36;53!UBERON:0002616;3.94e-36;53!UBERON:0000955;5.47e-30;68!UBERON:0001017;8.49e-27;75!UBERON:0000200;2.64e-25;6!UBERON:0002420;3.01e-23;9!UBERON:0007245;3.01e-23;9!UBERON:0010009;3.01e-23;9!UBERON:0010011;3.01e-23;9!UBERON:0000454;3.01e-23;9!UBERON:0000349;5.82e-22;5!UBERON:0001871;9.31e-22;6!UBERON:0001872;1.89e-21;5!UBERON:0001016;6.62e-19;83!UBERON:0000369;2.35e-18;4!UBERON:0002435;2.35e-18;4!UBERON:0000204;2.35e-18;4!UBERON:0009663;8.89e-16;7!UBERON:0002021;2.86e-14;5!UBERON:0005383;3.22e-14;3!UBERON:0005382;3.22e-14;3!UBERON:0001870;2.10e-13;3!UBERON:0000125;3.34e-12;9!UBERON:0002308;3.34e-12;9!UBERON:0007023;2.01e-10;114!UBERON:0011216;5.38e-10;132!UBERON:0001873;6.77e-10;2!UBERON:0001954;7.72e-10;2!UBERON:0003022;7.72e-10;2!UBERON:0002421;7.72e-10;2!UBERON:0002600;7.72e-10;2!UBERON:0001876;1.02e-09;2!UBERON:0002771;1.87e-09;2!UBERON:0002702;2.41e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.15e-89,32;UBERON:0002780,1.00e-85,41;UBERON:0001890,1.00e-85,41;UBERON:0003080,1.00e-85,41;UBERON:0006240,1.00e-85,41;UBERON:0001893,3.64e-84,34;UBERON:0002791,8.41e-83,32;UBERON:0002619,7.78e-78,22;UBERON:0003528,1.05e-77,34;UBERON:0002020,1.05e-77,34;UBERON:0001950,1.24e-69,20;UBERON:0000956,2.99e-68,25;UBERON:0000203,2.99e-68,25;UBERON:0000073,4.43e-65,53;UBERON:0002616,4.43e-65,53;UBERON:0001017,1.27e-62,81;UBERON:0001049,2.82e-61,56;UBERON:0005068,2.82e-61,56;UBERON:0006241,2.82e-61,56;UBERON:0007135,2.82e-61,56;UBERON:0000955,1.67e-59,68;UBERON:0006238,1.67e-59,68;UBERON:0001016,5.97e-59,89;UBERON:0003056,9.38e-56,61;UBERON:0003075,7.94e-40,82;UBERON:0007284,7.94e-40,82;UBERON:0002346,1.15e-37,86;UBERON:0010371,7.61e-35,104;UBERON:0004121,5.86e-31,171;UBERON:0000924,5.86e-31,171;UBERON:0006601,5.86e-31,171;UBERON:0007023,2.06e-29,114;UBERON:0000200,2.05e-25,6;UBERON:0010314,5.57e-24,132;UBERON:0002420,2.92e-23,9;UBERON:0007245,2.92e-23,9;UBERON:0010009,2.92e-23,9;UBERON:0010011,2.92e-23,9;UBERON:0000454,2.92e-23,9;UBERON:0000349,5.46e-22,5;UBERON:0001871,8.21e-22,6;UBERON:0011216,1.32e-21,223;UBERON:0001872,2.55e-21,5;UBERON:0000369,2.40e-18,4;UBERON:0002435,2.40e-18,4;UBERON:0000204,2.40e-18,4;UBERON:0010082,2.40e-18,4;UBERON:0009663,9.46e-16,7;UBERON:0005383,3.15e-14,3;UBERON:0005382,3.15e-14,3;UBERON:0002021,3.22e-14,5;UBERON:0000025,3.33e-14,192;UBERON:0001870,1.85e-13,3;UBERON:0000125,3.50e-12,9;UBERON:0002308,3.50e-12,9;UBERON:0004111,5.78e-1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7425 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12684 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000445482_5end | |||
|coexpression_cluster_id=C4634 | |||
|description=CAGE_peak_2_at_VGF_5end | |||
|id=chr7:100808394..100808436,- | |||
|ontology_enrichment_celltype=CL:0000540!1.63e-11!6;CL:0000031!1.63e-11!6;CL:0000404!1.63e-11!6;CL:0000047!3.79e-11!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.09e-15;82!UBERON:0010122;6.77e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.68e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.56e-10,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;6.08e-80;32!UBERON:0002619;6.49e-78;22!UBERON:0001893;1.31e-74;34!UBERON:0002791;1.48e-74;32!UBERON:0001950;1.06e-69;20!UBERON:0003528;1.17e-68;34!UBERON:0002020;1.17e-68;34!UBERON:0000956;2.54e-68;25!UBERON:0000203;2.54e-68;25!UBERON:0002780;6.11e-60;41!UBERON:0001890;6.11e-60;41!UBERON:0000073;3.94e-36;53!UBERON:0002616;3.94e-36;53!UBERON:0000955;5.47e-30;68!UBERON:0001017;8.49e-27;75!UBERON:0000200;2.64e-25;6!UBERON:0002420;3.01e-23;9!UBERON:0007245;3.01e-23;9!UBERON:0010009;3.01e-23;9!UBERON:0010011;3.01e-23;9!UBERON:0000454;3.01e-23;9!UBERON:0000349;5.82e-22;5!UBERON:0001871;9.31e-22;6!UBERON:0001872;1.89e-21;5!UBERON:0001016;6.62e-19;83!UBERON:0000369;2.35e-18;4!UBERON:0002435;2.35e-18;4!UBERON:0000204;2.35e-18;4!UBERON:0009663;8.89e-16;7!UBERON:0002021;2.86e-14;5!UBERON:0005383;3.22e-14;3!UBERON:0005382;3.22e-14;3!UBERON:0001870;2.10e-13;3!UBERON:0000125;3.34e-12;9!UBERON:0002308;3.34e-12;9!UBERON:0007023;2.01e-10;114!UBERON:0011216;5.38e-10;132!UBERON:0001873;6.77e-10;2!UBERON:0001954;7.72e-10;2!UBERON:0003022;7.72e-10;2!UBERON:0002421;7.72e-10;2!UBERON:0002600;7.72e-10;2!UBERON:0001876;1.02e-09;2!UBERON:0002771;1.87e-09;2!UBERON:0002702;2.41e-09;2 | |||
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|short_description=p2@VGF | |||
}} |
Revision as of 22:23, 13 September 2013
Short description: | p2@VGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_VGF_5end |
Coexpression cluster: | C4634_melanoma_occipital_amygdala_temporal_postcentral_brain_insula |
Association with transcript: | 0bp_to_ENST00000445482_5end |
EntrezGene: | VGF |
HGNC: | 12684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 5.56e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.